Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0259
         (518 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   3.5  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   4.7  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   6.2  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 192 ITLNLVEAAVLSQLEESAQIRAERYVIRETLQD*LLH 82
           I LNL+ A + S L     ++A R VIR  L   LLH
Sbjct: 224 ICLNLLLALIASNLSFILGVQATRNVIRCELIALLLH 260


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 438 KVTPNYILPGYKADPVRC 491
           K+ PN +L G+K D  RC
Sbjct: 774 KLRPNVLLMGFKGDWDRC 791


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 149 KRVHR*GQRDTLSGKLCKTNC 87
           K +H+ G +     KLC T C
Sbjct: 287 KMIHQVGNKPVFQCKLCPTTC 307


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,715
Number of Sequences: 2352
Number of extensions: 8723
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)