Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0258
         (671 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014372-1|AAH14372.2|  289|Homo sapiens TXNL2 protein protein.        35   0.23 
BC005289-1|AAH05289.1|  335|Homo sapiens thioredoxin-like 2 prot...    35   0.23 
AL139123-3|CAC40691.1|  335|Homo sapiens thioredoxin-like 3 prot...    35   0.23 
AJ010841-1|CAA09375.1|  335|Homo sapiens thioredoxin-like protei...    35   0.23 
AF118652-1|AAF28844.1|  335|Homo sapiens PKCq-interacting protei...    35   0.23 
AF118649-1|AAF28841.1|  335|Homo sapiens PKCq-interacting protei...    35   0.23 
X77584-1|CAA54687.1|  105|Homo sapiens ATL-derived factor/thiore...    35   0.30 
X54539-1|CAA38410.1|  105|Homo sapiens thioredoxin protein.            35   0.30 
CR407665-1|CAG28593.1|  105|Homo sapiens TXN protein.                  35   0.30 
BC054866-1|AAH54866.1|  105|Homo sapiens thioredoxin protein.          35   0.30 
BC003377-1|AAH03377.1|  105|Homo sapiens thioredoxin protein.          35   0.30 
AY004872-1|AAF87085.1|  105|Homo sapiens thioredoxin protein.          35   0.30 
AL158158-2|CAI14067.1|   85|Homo sapiens thioredoxin protein.          35   0.30 
AL158158-1|CAI14066.1|  105|Homo sapiens thioredoxin protein.          35   0.30 
AF548001-1|AAN33187.1|  105|Homo sapiens thioredoxin protein.          35   0.30 
AF313911-1|AAG34699.1|  105|Homo sapiens thioredoxin protein.          35   0.30 
AF065241-1|AAC17430.1|   84|Homo sapiens thioredoxin delta 3 pro...    35   0.30 
J04026-1|AAA74596.1|  105|Homo sapiens thioredoxin protein.            32   1.6  
AF276919-1|AAF86466.1|  105|Homo sapiens thioredoxin 1 protein.        32   1.6  
AB051444-1|BAB33327.1|  127|Homo sapiens KIAA1657 protein protein.     31   2.8  
AK055233-1|BAB70882.1|  473|Homo sapiens protein ( Homo sapiens ...    31   5.0  
BC022520-1|AAH22520.1|  387|Homo sapiens RPIB9 protein protein.        30   8.7  

>BC014372-1|AAH14372.2|  289|Homo sapiens TXNL2 protein protein.
          Length = 289

 Score = 35.1 bits (77), Expect = 0.23
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           Y I+S+PTF+F KN +K+D   GA+
Sbjct: 34  YEISSVPTFLFFKNSQKIDRLDGAH 58


>BC005289-1|AAH05289.1|  335|Homo sapiens thioredoxin-like 2
           protein.
          Length = 335

 Score = 35.1 bits (77), Expect = 0.23
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           Y I+S+PTF+F KN +K+D   GA+
Sbjct: 80  YEISSVPTFLFFKNSQKIDRLDGAH 104


>AL139123-3|CAC40691.1|  335|Homo sapiens thioredoxin-like 3
           protein.
          Length = 335

 Score = 35.1 bits (77), Expect = 0.23
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           Y I+S+PTF+F KN +K+D   GA+
Sbjct: 80  YEISSVPTFLFFKNSQKIDRLDGAH 104


>AJ010841-1|CAA09375.1|  335|Homo sapiens thioredoxin-like protein
           protein.
          Length = 335

 Score = 35.1 bits (77), Expect = 0.23
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           Y I+S+PTF+F KN +K+D   GA+
Sbjct: 80  YEISSVPTFLFFKNSQKIDRLDGAH 104


>AF118652-1|AAF28844.1|  335|Homo sapiens PKCq-interacting protein
           PICOT protein.
          Length = 335

 Score = 35.1 bits (77), Expect = 0.23
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           Y I+S+PTF+F KN +K+D   GA+
Sbjct: 80  YEISSVPTFLFFKNSQKIDRLDGAH 104


>AF118649-1|AAF28841.1|  335|Homo sapiens PKCq-interacting protein
           PICOT protein.
          Length = 335

 Score = 35.1 bits (77), Expect = 0.23
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           Y I+S+PTF+F KN +K+D   GA+
Sbjct: 80  YEISSVPTFLFFKNSQKIDRLDGAH 104


>X77584-1|CAA54687.1|  105|Homo sapiens ATL-derived
           factor/thioredoxin protein.
          Length = 105

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +  MPTF F K G+K+ EFSGAN
Sbjct: 71  VKCMPTFQFFKKGQKVGEFSGAN 93


>X54539-1|CAA38410.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +  MPTF F K G+K+ EFSGAN
Sbjct: 71  VKCMPTFQFFKKGQKVGEFSGAN 93


>CR407665-1|CAG28593.1|  105|Homo sapiens TXN protein.
          Length = 105

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +  MPTF F K G+K+ EFSGAN
Sbjct: 71  VKCMPTFQFFKKGQKVGEFSGAN 93


>BC054866-1|AAH54866.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +  MPTF F K G+K+ EFSGAN
Sbjct: 71  VKCMPTFQFFKKGQKVGEFSGAN 93


>BC003377-1|AAH03377.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +  MPTF F K G+K+ EFSGAN
Sbjct: 71  VKCMPTFQFFKKGQKVGEFSGAN 93


>AY004872-1|AAF87085.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +  MPTF F K G+K+ EFSGAN
Sbjct: 71  VKCMPTFQFFKKGQKVGEFSGAN 93


>AL158158-2|CAI14067.1|   85|Homo sapiens thioredoxin protein.
          Length = 85

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +  MPTF F K G+K+ EFSGAN
Sbjct: 51  VKCMPTFQFFKKGQKVGEFSGAN 73


>AL158158-1|CAI14066.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +  MPTF F K G+K+ EFSGAN
Sbjct: 71  VKCMPTFQFFKKGQKVGEFSGAN 93


>AF548001-1|AAN33187.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +  MPTF F K G+K+ EFSGAN
Sbjct: 71  VKCMPTFQFFKKGQKVGEFSGAN 93


>AF313911-1|AAG34699.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +  MPTF F K G+K+ EFSGAN
Sbjct: 71  VKCMPTFQFFKKGQKVGEFSGAN 93


>AF065241-1|AAC17430.1|   84|Homo sapiens thioredoxin delta 3
           protein.
          Length = 84

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +  MPTF F K G+K+ EFSGAN
Sbjct: 50  VKCMPTFQFFKKGQKVGEFSGAN 72


>J04026-1|AAA74596.1|  105|Homo sapiens thioredoxin protein.
          Length = 105

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +   PTF F K G+K+ EFSGAN
Sbjct: 71  VKCTPTFQFFKKGQKVGEFSGAN 93


>AF276919-1|AAF86466.1|  105|Homo sapiens thioredoxin 1 protein.
          Length = 105

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 18  INSMPTFVFVKNGKKLDEFSGAN 86
           +   PTF F K G+K+ EFSGAN
Sbjct: 71  VKCTPTFQFFKKGQKVGEFSGAN 93


>AB051444-1|BAB33327.1|  127|Homo sapiens KIAA1657 protein protein.
          Length = 127

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = +2

Query: 425 FLFLFLSGLLKCIISP-ILINV*DKFPSCFKNFCK*QVSQCFF--FLCYASRSMFF*RRA 595
           FL  FLS  L   +SP  L ++    P  F  F    +S  FF  FLC+ S  + F   +
Sbjct: 33  FLSFFLSFFLSLSLSPSFLPSLPLSLPPSF--FLSFFLSFFFFLSFLCFLSFFLSFLSFS 90

Query: 596 YALKVSVQLVHTH 634
           ++L +S+ L HTH
Sbjct: 91  FSLSLSLSLSHTH 103


>AK055233-1|BAB70882.1|  473|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30671 fis, clone FCBBF1000687, moderately
           similar to Mus musculus Rap2 interacting protein 8
           (RPIP8) mRNA. ).
          Length = 473

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -1

Query: 137 FSLYLLVFKDSCFEFVDVSAREFVQFLAILNE--DERRHRVNVVARW 3
           FS+  L+ + SCFE +D S+ EF  F AIL +    R   ++   RW
Sbjct: 42  FSVKTLIDR-SCFETIDDSSPEFNNFAAILEQILSHRLKEISQSCRW 87


>BC022520-1|AAH22520.1|  387|Homo sapiens RPIB9 protein protein.
          Length = 387

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -1

Query: 137 FSLYLLVFKDSCFEFVDVSAREFVQFLAILNEDERRHRVNVVARW 3
           FS+  ++ + SCFE +D S+ EF  F AIL E    HR+     W
Sbjct: 42  FSVKTMIDR-SCFETIDDSSPEFNNFAAIL-EQILSHRLKGQVTW 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,605,335
Number of Sequences: 237096
Number of extensions: 1617894
Number of successful extensions: 2375
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2375
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)