Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0258
         (671 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060458-1|AAL25497.1|  114|Drosophila melanogaster SD03042p pro...    47   2e-05
AF220362-1|AAF37263.1|  106|Drosophila melanogaster thioredoxin ...    47   2e-05
AE014134-1667|AAN10701.1|  106|Drosophila melanogaster CG31884-P...    47   2e-05
AE014134-1666|AAN10700.1|  106|Drosophila melanogaster CG31884-P...    47   2e-05
AJ507731-1|CAD45644.1|  157|Drosophila melanogaster thioredoxinT...    42   8e-04
AE014298-718|AAF46018.2|  157|Drosophila melanogaster CG3315-PA ...    42   8e-04
BT023024-1|AAY55440.1|  139|Drosophila melanogaster IP04051p pro...    36   0.066
BT022989-1|AAY55405.1|  139|Drosophila melanogaster IP04151p pro...    36   0.066
AE014296-2414|AAF49714.1|  139|Drosophila melanogaster CG13473-P...    36   0.066
L27072-1|AAA28937.1|  107|Drosophila melanogaster thioredoxin-li...    34   0.20 
AE014298-719|AAF46019.1|  107|Drosophila melanogaster CG4193-PA ...    34   0.20 
AY089550-1|AAL90288.1|  287|Drosophila melanogaster LD26837p pro...    33   0.35 
AF143404-1|AAF66635.1|  287|Drosophila melanogaster thioredoxin-...    33   0.35 
AE014296-996|AAF50750.1|  287|Drosophila melanogaster CG5495-PA ...    33   0.35 
AY051709-1|AAK93133.1|  416|Drosophila melanogaster LD24756p pro...    29   5.8  
AE014298-1673|AAF48082.2|  416|Drosophila melanogaster CG1837-PA...    29   5.8  

>AY060458-1|AAL25497.1|  114|Drosophila melanogaster SD03042p
           protein.
          Length = 114

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 19/25 (76%), Positives = 24/25 (96%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           YNI+SMPTFVF+KNG K++EF+GAN
Sbjct: 78  YNISSMPTFVFLKNGVKVEEFAGAN 102


>AF220362-1|AAF37263.1|  106|Drosophila melanogaster thioredoxin
           protein.
          Length = 106

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 19/25 (76%), Positives = 24/25 (96%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           YNI+SMPTFVF+KNG K++EF+GAN
Sbjct: 70  YNISSMPTFVFLKNGVKVEEFAGAN 94


>AE014134-1667|AAN10701.1|  106|Drosophila melanogaster CG31884-PB,
           isoform B protein.
          Length = 106

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 19/25 (76%), Positives = 24/25 (96%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           YNI+SMPTFVF+KNG K++EF+GAN
Sbjct: 70  YNISSMPTFVFLKNGVKVEEFAGAN 94


>AE014134-1666|AAN10700.1|  106|Drosophila melanogaster CG31884-PA,
           isoform A protein.
          Length = 106

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 19/25 (76%), Positives = 24/25 (96%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           YNI+SMPTFVF+KNG K++EF+GAN
Sbjct: 70  YNISSMPTFVFLKNGVKVEEFAGAN 94


>AJ507731-1|CAD45644.1|  157|Drosophila melanogaster thioredoxinT
           protein.
          Length = 157

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGANVD 92
           YN+NSMPTFVF+K G  L+ F G N D
Sbjct: 70  YNVNSMPTFVFIKGGNVLELFVGCNSD 96


>AE014298-718|AAF46018.2|  157|Drosophila melanogaster CG3315-PA
           protein.
          Length = 157

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGANVD 92
           YN+NSMPTFVF+K G  L+ F G N D
Sbjct: 70  YNVNSMPTFVFIKGGNVLELFVGCNSD 96


>BT023024-1|AAY55440.1|  139|Drosophila melanogaster IP04051p
           protein.
          Length = 139

 Score = 35.5 bits (78), Expect = 0.066
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGANVD 92
           Y +NSMPTF+ +KN   L +F G NV+
Sbjct: 77  YEVNSMPTFLIIKNRVTLIQFVGGNVE 103


>BT022989-1|AAY55405.1|  139|Drosophila melanogaster IP04151p
           protein.
          Length = 139

 Score = 35.5 bits (78), Expect = 0.066
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGANVD 92
           Y +NSMPTF+ +KN   L +F G NV+
Sbjct: 77  YEVNSMPTFLIIKNRVTLIQFVGGNVE 103


>AE014296-2414|AAF49714.1|  139|Drosophila melanogaster CG13473-PA
           protein.
          Length = 139

 Score = 35.5 bits (78), Expect = 0.066
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGANVD 92
           Y +NSMPTF+ +KN   L +F G NV+
Sbjct: 77  YEVNSMPTFLIIKNRVTLIQFVGGNVE 103


>L27072-1|AAA28937.1|  107|Drosophila melanogaster thioredoxin-like
           protein protein.
          Length = 107

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           Y + SMPTFVF++  ++L  F+GA+
Sbjct: 69  YKVRSMPTFVFLRQNRRLASFAGAD 93


>AE014298-719|AAF46019.1|  107|Drosophila melanogaster CG4193-PA
           protein.
          Length = 107

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGAN 86
           Y + SMPTFVF++  ++L  F+GA+
Sbjct: 69  YKVRSMPTFVFLRQNRRLASFAGAD 93


>AY089550-1|AAL90288.1|  287|Drosophila melanogaster LD26837p
           protein.
          Length = 287

 Score = 33.1 bits (72), Expect = 0.35
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 6   ASYNINSMPTFVFVKNGKKLDEFSGANVD 92
           A   +++MPTF+F +N  K+D   GA+V+
Sbjct: 68  AGQGVSAMPTFIFYRNRTKIDRVQGADVN 96


>AF143404-1|AAF66635.1|  287|Drosophila melanogaster
           thioredoxin-like protein TXL protein.
          Length = 287

 Score = 33.1 bits (72), Expect = 0.35
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 6   ASYNINSMPTFVFVKNGKKLDEFSGANVD 92
           A   +++MPTF+F +N  K+D   GA+V+
Sbjct: 68  AGQGVSAMPTFIFYRNRTKIDRVQGADVN 96


>AE014296-996|AAF50750.1|  287|Drosophila melanogaster CG5495-PA
           protein.
          Length = 287

 Score = 33.1 bits (72), Expect = 0.35
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 6   ASYNINSMPTFVFVKNGKKLDEFSGANVD 92
           A   +++MPTF+F +N  K+D   GA+V+
Sbjct: 68  AGQGVSAMPTFIFYRNRTKIDRVQGADVN 96


>AY051709-1|AAK93133.1|  416|Drosophila melanogaster LD24756p
           protein.
          Length = 416

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 8/24 (33%), Positives = 19/24 (79%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGA 83
           + +   PT +++++GKK++++SGA
Sbjct: 234 FEVKGYPTLLWIEDGKKIEKYSGA 257


>AE014298-1673|AAF48082.2|  416|Drosophila melanogaster CG1837-PA
           protein.
          Length = 416

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 8/24 (33%), Positives = 19/24 (79%)
 Frame = +3

Query: 12  YNINSMPTFVFVKNGKKLDEFSGA 83
           + +   PT +++++GKK++++SGA
Sbjct: 234 FEVKGYPTLLWIEDGKKIEKYSGA 257


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,039,635
Number of Sequences: 53049
Number of extensions: 487391
Number of successful extensions: 964
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)