Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0257
(625 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 24 1.0
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 24 1.4
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 24 1.4
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 24 1.4
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 24 1.4
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 24 1.4
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 2.4
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.2
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 5.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 5.6
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.8
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.8
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.8
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.8
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 9.8
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 9.8
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 9.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.8
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.8
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.2 bits (50), Expect = 1.0
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNYI*K*YAKL-YNLRSLTQ 113
R + +I+ S+ +NY Y NY Y +L YN+ + Q
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINHIEQ 111
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNYI*K*YAKL-YNLRSLTQ 113
R + +I+ S+ +NY Y NY Y +L YN+ + Q
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNYI*K*YAKL-YNLRSLTQ 113
R + +I+ S+ +NY Y NY Y +L YN+ + Q
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNYI*K*YAKL-YNLRSLTQ 113
R + +I+ S+ +NY Y NY Y +L YN+ + Q
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNYI*K*YAKL-YNLRSLTQ 113
R + +I+ S+ +NY Y NY Y +L YN+ + Q
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNYI*K*YAKL-YNLRSLTQ 113
R + +I+ S+ +NY Y NY Y +L YN+ + Q
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 335 FICLHVLYIVMTAILKSIYTFLNFVN 412
F+C+ ++YI+M I + NF++
Sbjct: 402 FLCISLVYIIMLIIFIPRNIYENFIS 427
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = -2
Query: 438 IIALQYNALFTKLRNVYILFNIAVITMYKTCKHINSTYYVT 316
+IA Y + + VY + + + KHI T Y T
Sbjct: 817 MIAFAYPIMLIVVCTVYAVLTRKIPEAFNESKHIGFTMYTT 857
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.8 bits (44), Expect = 5.6
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -2
Query: 423 YNALFTKLRNVYILFNIAVITMYKTCKHINSTYYVTSKCITGL 295
YNAL + VY + + + K I T Y T CI L
Sbjct: 680 YNALLILISTVYAVKTRKIPENFNESKFIGFTMYTT--CIIWL 720
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 5.6
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -2
Query: 423 YNALFTKLRNVYILFNIAVITMYKTCKHINSTYYVTSKCITGL 295
YNAL + VY + + + K I T Y T CI L
Sbjct: 770 YNALLILISTVYAVKTRKIPENFNESKFIGFTMYTT--CIIWL 810
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNY 65
R + +I+ S+ +NY Y NY
Sbjct: 75 RSKEPKIISSLSNNYKYSNY 94
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNY 65
R + +I+ S+ +NY Y NY
Sbjct: 75 RSKEPKIISSLSNNYKYSNY 94
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNY 65
R + +I+ S+ +NY Y NY
Sbjct: 75 RSKEPKIISSLSNNYKYSNY 94
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNY 65
R + +I+ S+ +NY Y NY
Sbjct: 75 RSKEPKIISSLSNNYKYSNY 94
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNY 65
R + +IV S+ +NY Y NY
Sbjct: 75 RSKEPKIVSSLSNNYNYSNY 94
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNY 65
R + +I+ S+ +NY Y NY
Sbjct: 75 RSKEPKIISSLSNNYKYSNY 94
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 389 YTFLNFVNSALYWSAI 436
YTF F N L W+++
Sbjct: 795 YTFEQFHNKELLWTSV 810
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 389 YTFLNFVNSALYWSAI 436
YTF F N L W+++
Sbjct: 833 YTFEQFHNKELLWTSV 848
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNY 65
R + +I+ S+ +NY Y NY
Sbjct: 308 RSKEPKIISSLSNNYKYSNY 327
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 6 RGQNIRIV*SVIHNYVYMNY 65
R + +I+ S+ +NY Y NY
Sbjct: 308 RSKEPKIISSLSNNYKYSNY 327
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,671
Number of Sequences: 438
Number of extensions: 4041
Number of successful extensions: 29
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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