Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0255
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.9  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   6.8  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   6.8  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   6.8  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 142  SRVTGEWNGEPFNRVIEAENINDC 71
            S+++  WNG+ FN      + N C
Sbjct: 1611 SKLSFSWNGQEFNLFCSTGSSNSC 1634


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 304 PYSVIIILATVFSPFPPATL 363
           P S + I+ TVF  FP AT+
Sbjct: 225 PNSCVQIVDTVFGDFPGATM 244


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 304 PYSVIIILATVFSPFPPATL 363
           P S + I+ TVF  FP AT+
Sbjct: 225 PNSCVQIVDTVFGDFPGATM 244


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 304 PYSVIIILATVFSPFPPATL 363
           P S + I+ TVF  FP AT+
Sbjct: 111 PNSCVQIVDTVFGDFPGATM 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,910
Number of Sequences: 2352
Number of extensions: 13544
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)