Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0254
(714 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P54746 Cluster: Uncharacterized protein ybgG; n=17; Bac... 182 1e-44
UniRef50_Q8Y9W8 Cluster: Lmo0401 protein; n=12; Listeria|Rep: Lm... 74 3e-12
UniRef50_A6CYP7 Cluster: Alpha-mannosidase; n=2; Vibrionaceae|Re... 72 2e-11
UniRef50_Q182Q9 Cluster: Putative glycosyl hydrolase; n=4; Clost... 71 3e-11
UniRef50_A7MI98 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_Q8Y3U7 Cluster: Lmo2734 protein; n=10; Bacillales|Rep: ... 66 8e-10
UniRef50_Q1Z3L8 Cluster: Putative sugar hydrolase; n=1; Photobac... 66 8e-10
UniRef50_Q7MCJ2 Cluster: Alpha-mannosidase; n=3; Vibrionaceae|Re... 63 8e-09
UniRef50_A5Z564 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_UPI00015C5C3E Cluster: hypothetical protein CKO_03577; ... 56 1e-06
UniRef50_Q6MSD2 Cluster: Glycosyl hydrolases family protein; n=1... 45 0.002
UniRef50_Q0ST33 Cluster: Sugar hydrolase; n=2; Clostridium perfr... 44 0.003
UniRef50_Q1AZX7 Cluster: Glycoside hydrolase, family 38 precurso... 44 0.004
UniRef50_Q92EL0 Cluster: Lin0449 protein; n=15; Firmicutes|Rep: ... 44 0.005
UniRef50_Q9KER0 Cluster: BH0789 protein; n=1; Bacillus haloduran... 40 0.080
UniRef50_Q648D9 Cluster: Alpha-mannosidase; n=1; uncultured arch... 38 0.19
UniRef50_A4AZD1 Cluster: Bifunctional murein transglycosylase/tr... 38 0.25
UniRef50_A4MAB6 Cluster: Glycoside hydrolase, family 38; n=1; Pe... 37 0.43
UniRef50_A4AN26 Cluster: Alpha-mannosidase; n=1; Flavobacteriale... 36 0.75
UniRef50_Q93HJ5 Cluster: Modular polyketide synthase; n=5; Actin... 36 0.99
UniRef50_Q5KE61 Cluster: Transcriptional activator, putative; n=... 36 0.99
UniRef50_Q5Z8G0 Cluster: Putative uncharacterized protein P0487E... 36 1.3
UniRef50_Q6FD39 Cluster: Bifunctional protein [Includes: lytic m... 34 4.0
UniRef50_UPI0000D5780C Cluster: PREDICTED: similar to CG6305-PA;... 33 5.3
UniRef50_Q7R3A3 Cluster: GLP_111_55104_53896; n=1; Giardia lambl... 33 5.3
UniRef50_Q9NY27 Cluster: Serine/threonine-protein phosphatase 4 ... 33 5.3
UniRef50_Q1AUD2 Cluster: Alpha-mannosidase; n=1; Rubrobacter xyl... 33 7.0
UniRef50_Q5CX36 Cluster: DNA repair helicase; n=3; Cryptosporidi... 33 7.0
UniRef50_Q4PDQ7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q1E779 Cluster: Putative uncharacterized protein; n=2; ... 33 7.0
UniRef50_Q3WB12 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_A6GGQ2 Cluster: Peptidase C14, caspase catalytic subuni... 33 9.2
UniRef50_A1CC45 Cluster: Transcription initiation factor IIF sub... 33 9.2
>UniRef50_P54746 Cluster: Uncharacterized protein ybgG; n=17;
Bacteria|Rep: Uncharacterized protein ybgG - Escherichia
coli (strain K12)
Length = 877
Score = 182 bits (442), Expect = 1e-44
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +2
Query: 254 SLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDVMKLNKAGFNVPESYSLLKMPPVGCL 433
SLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDVMKLNKAGFNVPESYSLLKMPPVGCL
Sbjct: 743 SLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDVMKLNKAGFNVPESYSLLKMPPVGCL 802
Query: 434 ISALKKAEDRQEVILRLFNPAESAT 508
ISALKKAEDRQEVILRLFNPAESAT
Sbjct: 803 ISALKKAEDRQEVILRLFNPAESAT 827
Score = 177 bits (430), Expect = 3e-43
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 APVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLR 182
APVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLR
Sbjct: 659 APVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLR 718
Query: 183 PGRPSGIKMPVPDSQLRGLLSCRL 254
PGRPSGIKMPVPDSQLRGLLSCRL
Sbjct: 719 PGRPSGIKMPVPDSQLRGLLSCRL 742
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 511 DATVAFSREVISCSETMMDEHITTEENQGSNLSGPFLPG 627
DATVAFSREVISCSETMMDEHITTEENQGSNLSGPFLPG
Sbjct: 829 DATVAFSREVISCSETMMDEHITTEENQGSNLSGPFLPG 867
>UniRef50_Q8Y9W8 Cluster: Lmo0401 protein; n=12; Listeria|Rep:
Lmo0401 protein - Listeria monocytogenes
Length = 875
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 APVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLR 182
AP+ + M ++V+L + +G+AV +EG+RE+E+IGE T ++TL R +GK DLL R
Sbjct: 664 APISIEAMQSFVSLHDESHGVAVMTEGVREYEIIGENYDTISLTLFRTFSHMGKTDLLYR 723
Query: 183 PGRPSGIK-MPVPDSQLRG 236
PGR SG + PD+QL G
Sbjct: 724 PGRASGESIVATPDAQLLG 742
Score = 33.9 bits (74), Expect = 4.0
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2
Query: 395 SYSLLKMPPVGCLISALKKAEDRQEVILRLFNP 493
+YSL G +ISA+KKAED I R FNP
Sbjct: 800 TYSLALPTIDGAIISAVKKAEDSDAFITRFFNP 832
>UniRef50_A6CYP7 Cluster: Alpha-mannosidase; n=2; Vibrionaceae|Rep:
Alpha-mannosidase - Vibrio shilonii AK1
Length = 839
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = +3
Query: 3 APVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLR 182
APV + M + V + G+ V ++GLRE+E + + AITLLR VG LG+ +L R
Sbjct: 624 APVANYPMQSMVLHRNASRGLGVVTKGLREYEFHQDTPNSIAITLLRSVGWLGQANLTYR 683
Query: 183 PGRPSGIKMPVPDSQLRG 236
PGR SG+ +P PDSQ++G
Sbjct: 684 PGRASGMVLPAPDSQIQG 701
Score = 40.3 bits (90), Expect = 0.046
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +2
Query: 320 TPVQCYNKIPWDVMKLNKAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAE 499
TPV + W +LN VPES SL++ S LKK+E +++ILR FNP
Sbjct: 729 TPVISHVGTDWARFRLNPTTLVVPESQSLVEWNN-SLHFSTLKKSEHSEQIILRAFNPTL 787
Query: 500 SA 505
S+
Sbjct: 788 SS 789
>UniRef50_Q182Q9 Cluster: Putative glycosyl hydrolase; n=4;
Clostridium difficile|Rep: Putative glycosyl hydrolase -
Clostridium difficile (strain 630)
Length = 892
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/76 (40%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +3
Query: 6 PVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRP 185
P+ + M ++V L++G+ G+A+ + +RE++++G+ T A+TL R G +G+E+LL RP
Sbjct: 668 PITIEPMQSFVTLEDGQRGIALITGCVREYQIVGDNLDTIALTLFRSFGYMGRENLLYRP 727
Query: 186 GRPSGIK-MPVPDSQL 230
GR SG K + PD+QL
Sbjct: 728 GRASGEKIIATPDAQL 743
Score = 33.5 bits (73), Expect = 5.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +2
Query: 257 LLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWD----VMKLNKAGFNVPESYSLLKMPPV 424
L Y A VA A+ +LTP+Q Y + + N +SL+ +
Sbjct: 753 LYIYNNKFDEANVANTAKRFLTPIQIYEYADFLNGRLIFAFNDEKQIYENEFSLMNVNNS 812
Query: 425 GCLISALKKAEDRQEVILRLFN 490
+SA+KK E +++R+FN
Sbjct: 813 NFTVSAIKKEEKGDGIVVRIFN 834
>UniRef50_A7MI98 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 887
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Frame = +3
Query: 6 PVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRP 185
PVPV+ + N VAL++ + A ++G++E+EV+ +E A+TL R VGLLGK+D RP
Sbjct: 662 PVPVYTLENCVALRDDNHLFAAITQGIKEYEVLPDED-VLALTLFRSVGLLGKDDTPWRP 720
Query: 186 GRPSGIK---MPVPDSQL 230
GR SGI + PD+Q+
Sbjct: 721 GRASGINNKIVDTPDAQM 738
>UniRef50_Q8Y3U7 Cluster: Lmo2734 protein; n=10; Bacillales|Rep:
Lmo2734 protein - Listeria monocytogenes
Length = 882
Score = 66.1 bits (154), Expect = 8e-10
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 APVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLR 182
APVP++ + N VA+ E +A+ G++E+E++ + + A+TL R GLLGK+DL+ R
Sbjct: 662 APVPIFPVENIVAVSEEDATLALLVGGIKEYEILPKTAE-IALTLFRSNGLLGKDDLMWR 720
Query: 183 PGRPSGIK---MPVPDSQL 230
PGR SGI +P PD Q+
Sbjct: 721 PGRASGINNKVVPTPDGQM 739
>UniRef50_Q1Z3L8 Cluster: Putative sugar hydrolase; n=1;
Photobacterium profundum 3TCK|Rep: Putative sugar
hydrolase - Photobacterium profundum 3TCK
Length = 876
Score = 66.1 bits (154), Expect = 8e-10
Identities = 36/83 (43%), Positives = 53/83 (63%)
Frame = +3
Query: 6 PVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRP 185
PV ++ M + VA + + G+A+ ++G+RE++ E + AITL R VG +GK +L RP
Sbjct: 665 PVAIYPMQSVVAGETEQGGIAILTDGIREYQQYHE---SIAITLFRAVGYVGKPELKYRP 721
Query: 186 GRPSGIKMPVPDSQLRGLLSCRL 254
GR SG+ PDSQL+ LS RL
Sbjct: 722 GRLSGLPDASPDSQLKQPLSFRL 744
>UniRef50_Q7MCJ2 Cluster: Alpha-mannosidase; n=3; Vibrionaceae|Rep:
Alpha-mannosidase - Vibrio vulnificus (strain YJ016)
Length = 877
Score = 62.9 bits (146), Expect = 8e-09
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +3
Query: 6 PVPVWNMLNYVALQEGRNGMAVFSEGLREFEVI-GEEKKTFAITLLRGVGLLGKEDLLLR 182
P+ + VA+ E + + GL+EF+V+ G E A+TL + G LGK+DLL R
Sbjct: 654 PIDIETTDGSVAIAESERALIITGRGLKEFQVLKGSESDKIALTLFKSTGRLGKDDLLWR 713
Query: 183 PGRPSGIKMPV---PDSQLRGLLS 245
PGR SGI V PD+QL+ +S
Sbjct: 714 PGRASGINNTVVYTPDAQLQKAMS 737
>UniRef50_A5Z564 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 905
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +3
Query: 6 PVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRP 185
P+ + +YV+L +G+ G+AV +G+RE+EV+ + +TL R G +GKE+L+ RP
Sbjct: 684 PISIEPTQSYVSLTDGKQGIAVIPQGVREYEVLDDH--MIRLTLFRTYGFMGKENLIYRP 741
Query: 186 GRPSGIK-MPVPDSQL 230
GR SG + + P +QL
Sbjct: 742 GRASGERIIETPAAQL 757
>UniRef50_UPI00015C5C3E Cluster: hypothetical protein CKO_03577;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_03577 - Citrobacter koseri ATCC BAA-895
Length = 872
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +3
Query: 6 PVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRP 185
PV + +A++E + + S G++EF++ A+TL + G+LG++DL RP
Sbjct: 653 PVDIETSEGIIAIEENNRSLIINSLGMKEFQICQNGTAQIALTLFKSTGVLGRDDLDWRP 712
Query: 186 GRPSGIKMPV---PDSQL 230
GR SGI V PD+QL
Sbjct: 713 GRASGINNTVVNTPDAQL 730
>UniRef50_Q6MSD2 Cluster: Glycosyl hydrolases family protein; n=1;
Mycoplasma mycoides subsp. mycoides SC|Rep: Glycosyl
hydrolases family protein - Mycoplasma mycoides subsp.
mycoides SC
Length = 792
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +3
Query: 6 PVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRP 185
PV + +YV L+ R+ + G E+E+I KK +TL R + +LG+ +LL RP
Sbjct: 667 PVGIETNESYVYLKSNRSKTGFVTLGTNEYEIIN--KKEIHLTLFRSIDVLGRNNLLWRP 724
Query: 186 GRPSG 200
R SG
Sbjct: 725 NRASG 729
>UniRef50_Q0ST33 Cluster: Sugar hydrolase; n=2; Clostridium
perfringens|Rep: Sugar hydrolase - Clostridium
perfringens (strain SM101 / Type A)
Length = 859
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +3
Query: 30 NYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLG 161
N+V + +G+ G+ + + GL E+EV+ + K T A+T+LR VG LG
Sbjct: 675 NFVDVNDGKVGLMIANMGLPEYEVLRDGKNTIALTILRSVGELG 718
>UniRef50_Q1AZX7 Cluster: Glycoside hydrolase, family 38 precursor;
n=1; Rubrobacter xylanophilus DSM 9941|Rep: Glycoside
hydrolase, family 38 precursor - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 937
Score = 44.0 bits (99), Expect = 0.004
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +3
Query: 48 EGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQ 227
E G+AV ++GL E+EV E + +TLLRGVG L + DL R G +G + P++Q
Sbjct: 717 ETGRGLAVLNKGLPEYEVTPEGE--VCLTLLRGVGWLSRNDLSTRTGH-AGPGLATPEAQ 773
Query: 228 LRG 236
G
Sbjct: 774 CSG 776
Score = 41.9 bits (94), Expect = 0.015
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +2
Query: 254 SLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDVMKLNKAGFNVPESY--SLLKMPPVG 427
+++ YTG AG+ ++A + P++ WDV + + P S L++
Sbjct: 783 AVVPYTGGHREAGIFREAEEYWLPLEA-----WDVHRGERPREGSPAGAPGSFLRVHGKD 837
Query: 428 CLISALKKAEDRQEVILRLFNPAE 499
++S LKKA DR ++LRLFN +E
Sbjct: 838 AVLSTLKKAADRDGLVLRLFNASE 861
>UniRef50_Q92EL0 Cluster: Lin0449 protein; n=15; Firmicutes|Rep:
Lin0449 protein - Listeria innocua
Length = 860
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +3
Query: 6 PVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRP 185
P+ + + V L +F++G++E++ + + A+TLL G LGK DL RP
Sbjct: 643 PIDIEPLEQSVTLTNEAESCTIFTQGVKEYQQLDQH---LALTLLATTGQLGKPDLAYRP 699
Query: 186 GRPSG 200
GR SG
Sbjct: 700 GRASG 704
>UniRef50_Q9KER0 Cluster: BH0789 protein; n=1; Bacillus
halodurans|Rep: BH0789 protein - Bacillus halodurans
Length = 777
Score = 39.5 bits (88), Expect = 0.080
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 21 NMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRP 185
+M V+L G G+ + ++GL E+E++ + + A+TLLR VG LG L P
Sbjct: 592 HMQRLVSLDNGEYGLTIATKGLHEYEIVSD---SIAVTLLRSVGELGDWGLFETP 643
>UniRef50_Q648D9 Cluster: Alpha-mannosidase; n=1; uncultured
archaeon GZfos3D4|Rep: Alpha-mannosidase - uncultured
archaeon GZfos3D4
Length = 877
Score = 38.3 bits (85), Expect = 0.19
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +2
Query: 353 DVMKLNKAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAESATVMRLLL 526
D ++L K G +P + S LK+ P ++SALK+AED VILR + T + L
Sbjct: 774 DTLQLPK-GMKLPLNRSFLKIDPGNVVLSALKRAEDGDGVILRFYETKGEETNAEITL 830
>UniRef50_A4AZD1 Cluster: Bifunctional murein
transglycosylase/transpeptidase; n=2;
Alteromonadales|Rep: Bifunctional murein
transglycosylase/transpeptidase - Alteromonas macleodii
'Deep ecotype'
Length = 887
Score = 37.9 bits (84), Expect = 0.25
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 3 APVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLR 182
AP+ WN VA + +N A + +R + +G+ K ++ LLRGVGL D L R
Sbjct: 513 APINQWNAATGVAWRP-QNSPAEYDGPIRMRKALGKSKNVVSVRLLRGVGLRETADYLTR 571
Query: 183 PG 188
G
Sbjct: 572 FG 573
>UniRef50_A4MAB6 Cluster: Glycoside hydrolase, family 38; n=1;
Petrotoga mobilis SJ95|Rep: Glycoside hydrolase, family
38 - Petrotoga mobilis SJ95
Length = 1022
Score = 37.1 bits (82), Expect = 0.43
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +2
Query: 254 SLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDVMKLNKAGFNVPESYSLLKMPPVGCL 433
SLL + GT + V Q+A Y+ I + K N+ G N+P+++S +K+ +
Sbjct: 895 SLLPHAGTWRDSQVIQEAYKLN-----YSVIVKKIRK-NEEG-NLPDNFSFIKVNDFDVV 947
Query: 434 ISALKKAEDRQEVILRLF 487
I +KKAED +++RLF
Sbjct: 948 IETIKKAEDDDSILIRLF 965
>UniRef50_A4AN26 Cluster: Alpha-mannosidase; n=1; Flavobacteriales
bacterium HTCC2170|Rep: Alpha-mannosidase -
Flavobacteriales bacterium HTCC2170
Length = 1185
Score = 36.3 bits (80), Expect = 0.75
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 386 VPESYSLLKMPPVGCLISALKKAEDRQEVILRLFN 490
+PES S + +IS +KKAED +E+I R++N
Sbjct: 1098 LPESLSFFSIDTDNVMISTIKKAEDSEEIIARMYN 1132
>UniRef50_Q93HJ5 Cluster: Modular polyketide synthase; n=5;
Actinomycetales|Rep: Modular polyketide synthase -
Streptomyces avermitilis
Length = 6146
Score = 35.9 bits (79), Expect = 0.99
Identities = 29/87 (33%), Positives = 38/87 (43%)
Frame = +2
Query: 134 VAAWRGLTGQRRSAFKAWAAFGN*NASPGLTTTWSAFLSPSLLSYTGTPTAAGVAQQARA 313
VAA L G + A G A+ GLT W AF +P T PT A Q R
Sbjct: 1805 VAAVPALRGDQPETRTVVTAVGRLYAT-GLTVDWPAFFAPYGARPTELPTYA--FQHRRY 1861
Query: 314 WLTPVQCYNKIPWDVMKLNKAGFNVPE 394
WL PV + P + ++ A +VP+
Sbjct: 1862 WLEPVAPSSAPPANPLRYRTAWASVPD 1888
>UniRef50_Q5KE61 Cluster: Transcriptional activator, putative; n=2;
Filobasidiella neoformans|Rep: Transcriptional
activator, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 1242
Score = 35.9 bits (79), Expect = 0.99
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = -3
Query: 253 RRQESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAKVFFSSPMTSNSRNPSL 74
+R RPR T + + +P L S SS KP P+ + S +++
Sbjct: 233 KRPRPRPRVPSKSTNVQRGDEKPSLPSSSSTQPKPKPKPKPKPRSISQSHPQPETKHVQA 292
Query: 73 KTAMPLRPSCKAT*LSIFHT 14
KT P+R + +FHT
Sbjct: 293 KTLPPIRQYVLSKLTLLFHT 312
>UniRef50_Q5Z8G0 Cluster: Putative uncharacterized protein
P0487E11.1; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0487E11.1 - Oryza sativa subsp. japonica (Rice)
Length = 54
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 48 EGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLL 158
+G +G + S GL F++I + KTFA+ L+ G+GL+
Sbjct: 11 DGDDGHDLMSLGLSSFDMIRHQAKTFALALVDGIGLI 47
>UniRef50_Q6FD39 Cluster: Bifunctional protein [Includes: lytic
murein transglycosylase C, membrane-bound (MtlD);
putative LysM domains]; n=2; Acinetobacter|Rep:
Bifunctional protein [Includes: lytic murein
transglycosylase C, membrane-bound (MtlD); putative LysM
domains] - Acinetobacter sp. (strain ADP1)
Length = 1073
Score = 33.9 bits (74), Expect = 4.0
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -3
Query: 205 LIPEGRPGLKSRSSLPSKPTPRSNVMAKVFFSS---PMTSNSRNPSLKTAMPLRPSCKAT 35
L P G GL + SS P +PTP ++ S+ P+ + +P + TA RP+ +T
Sbjct: 350 LKPSGNSGLWASSSAPVQPTPTVSISTTPRNSNSGQPLATTKTSPPVMTASASRPTVSST 409
Query: 34 *LSI 23
SI
Sbjct: 410 VSSI 413
>UniRef50_UPI0000D5780C Cluster: PREDICTED: similar to CG6305-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG6305-PA - Tribolium castaneum
Length = 232
Score = 33.5 bits (73), Expect = 5.3
Identities = 32/85 (37%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = -3
Query: 298 SYTSGGWRTGITQ*TRRQESRPRSCESG-TGILIPEGRPGLKSRSSLPSKPTPRSNVMAK 122
SY SG R + SRP S SG TG P GRP S S PS+P+ S
Sbjct: 92 SYPSGPSRPSVPS-YPSGSSRPPSFPSGPTGY--PSGRPTGPSFPSTPSRPSTPSFPSRP 148
Query: 121 VFFSSPMTSNSRNPSLKTAMPLRPS 47
S P T + +PS + P RPS
Sbjct: 149 STPSFPSTPSRPSPSFPST-PSRPS 172
>UniRef50_Q7R3A3 Cluster: GLP_111_55104_53896; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_55104_53896 - Giardia lamblia
ATCC 50803
Length = 402
Score = 33.5 bits (73), Expect = 5.3
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 314 WLTPVQCYNKIPWDVMKLNKAGFNVPESYSLLK-MPPVGCLISALKKAEDRQE 469
WL VQ + + V KLN A ++P+S K +PP G A KKA+ ++
Sbjct: 174 WLNTVQALSGVSSVVPKLNHASHSIPKSPEEAKALPPPGSCHDAGKKAKSEED 226
>UniRef50_Q9NY27 Cluster: Serine/threonine-protein phosphatase 4
regulatory subunit 2; n=27; Euteleostomi|Rep:
Serine/threonine-protein phosphatase 4 regulatory
subunit 2 - Homo sapiens (Human)
Length = 417
Score = 33.5 bits (73), Expect = 5.3
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 247 QESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAKVFFSSPMTSN 92
+++ S G++ P P RS++ TPR KV S+PMT+N
Sbjct: 140 EKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRPKVSLSAPMTTN 191
>UniRef50_Q1AUD2 Cluster: Alpha-mannosidase; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: Alpha-mannosidase -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 1063
Score = 33.1 bits (72), Expect = 7.0
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +2
Query: 254 SLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDVMKLNKAGFNVPESYSLLKMPPVGCL 433
SL + G T AGV ++A A +P+ P PE+ L++ +
Sbjct: 943 SLFPHPGDWTQAGVVEEAFALNSPLFAAEGAP-------------PEAAGLVEAEGLPLA 989
Query: 434 ISALKKAEDRQEVILRLFNP--AESATVMRL 520
+ ALK+AE+ + ++LRL+ P A V+RL
Sbjct: 990 LGALKRAEEGEGLVLRLYEPRGARGRAVLRL 1020
>UniRef50_Q5CX36 Cluster: DNA repair helicase; n=3;
Cryptosporidium|Rep: DNA repair helicase -
Cryptosporidium parvum Iowa II
Length = 1108
Score = 33.1 bits (72), Expect = 7.0
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -3
Query: 256 TRRQESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAKVFFSSPMT-SNSRNP 80
T ++ES+ + I+IP+ PGL S+ S+P K S+ ++ S+P T S+++N
Sbjct: 926 TTKEESKGEENNTNNKIIIPKPFPGLISKVSVPWKRVKTSSPCSESRNSTPWTFSSNKNE 985
Query: 79 S 77
S
Sbjct: 986 S 986
>UniRef50_Q4PDQ7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 614
Score = 33.1 bits (72), Expect = 7.0
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +2
Query: 215 PGLTTTWSAFLSPSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDVMKLNKAGFNVPE 394
P T ++ P+ ++ G P +A A + N IPW ++KL++ G VP+
Sbjct: 427 PSSTGSYVGDAIPAFVTIVGIPLFFNIAYGLIAGICCYIALNGIPWIILKLSR-GQLVPD 485
Query: 395 SYSLLKMPPVGCLISA 442
+ +K P ++SA
Sbjct: 486 GWDTMKEPWGARMVSA 501
>UniRef50_Q1E779 Cluster: Putative uncharacterized protein; n=2;
Eurotiomycetidae|Rep: Putative uncharacterized protein -
Coccidioides immitis
Length = 538
Score = 33.1 bits (72), Expect = 7.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 40 PYRKGVTAWLSLAKGYVNLKSSVKRRKPLPLRCCVAWAYW 159
P KG + + KG+V++ SSV RR P + C+ W W
Sbjct: 308 PKPKGENVFHLMIKGWVSMFSSV-RRYPEAFKLCIGWVLW 346
>UniRef50_Q3WB12 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 496
Score = 32.7 bits (71), Expect = 9.2
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 250 RQESRPRSCESGTGILIPEGRPGLKSR-SSLPSKPT-PRSNVMAKVFFSSPMTSNSRNPS 77
RQ RPRS + G + RPG + R S++ S+P PR A S+P+ +
Sbjct: 206 RQYHRPRSADRGGWFVPHHDRPGEEPRPSAVDSRPAFPRLPGHADQLGSAPVLDGAAPAR 265
Query: 76 LKTAMPLRP 50
A PLRP
Sbjct: 266 RHRAGPLRP 274
>UniRef50_A6GGQ2 Cluster: Peptidase C14, caspase catalytic subunit
p20; n=1; Plesiocystis pacifica SIR-1|Rep: Peptidase
C14, caspase catalytic subunit p20 - Plesiocystis
pacifica SIR-1
Length = 1224
Score = 32.7 bits (71), Expect = 9.2
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 90 EFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRG 236
E EV+ E T A LLR VG G+ L R + + P+ + LRG
Sbjct: 438 ELEVVSERDPTIAAVLLREVGEQGRASELWRSAANASLGRPLSHAVLRG 486
>UniRef50_A1CC45 Cluster: Transcription initiation factor IIF
subunit alpha, putative; n=7; Eurotiomycetidae|Rep:
Transcription initiation factor IIF subunit alpha,
putative - Aspergillus clavatus
Length = 717
Score = 32.7 bits (71), Expect = 9.2
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +3
Query: 75 SEGLREFEV-IGEEKKTFA--ITLLRGVGLLGKEDLLLRPG 188
S+ LR F IGE K+ I +++ VG+ GKED LLRPG
Sbjct: 670 SDLLRIFRPRIGESKENHRKFIAIVKDVGVYGKEDRLLRPG 710
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,296,446
Number of Sequences: 1657284
Number of extensions: 16401998
Number of successful extensions: 41851
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 39706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41802
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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