Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0254
(714 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC128137-1|AAI28138.1| 417|Homo sapiens protein phosphatase 4, ... 33 0.77
BC128136-1|AAI28137.1| 417|Homo sapiens protein phosphatase 4, ... 33 0.77
BC110889-1|AAI10890.1| 360|Homo sapiens PPP4R2 protein protein. 33 0.77
BC100281-1|AAI00282.1| 271|Homo sapiens PPP4R2 protein protein. 33 0.77
AJ271448-1|CAB93534.2| 495|Homo sapiens protein phosphatase 4 r... 33 0.77
AF327345-1|AAL56006.1| 417|Homo sapiens hypothetical protein SB... 33 0.77
BC034607-1|AAH34607.1| 1142|Homo sapiens ASPM protein protein. 31 4.1
AY971956-1|AAY46814.1| 1892|Homo sapiens abnormal spindle-like m... 31 4.1
AY971955-1|AAY46813.1| 1062|Homo sapiens abnormal spindle-like m... 31 4.1
AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like m... 31 4.1
AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle) ... 31 4.1
AL353809-3|CAH72550.1| 1142|Homo sapiens asp (abnormal spindle) ... 31 4.1
AK001411-1|BAA91676.1| 726|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein. 31 4.1
AL121673-4|CAC28600.1| 430|Homo sapiens C20orf59 protein. 31 5.4
AL121673-2|CAH72268.1| 436|Homo sapiens C20orf59 protein. 31 5.4
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 30 7.2
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 30 7.2
AF457575-1|AAM10835.1| 326|Homo sapiens death effector domain-c... 30 7.2
>BC128137-1|AAI28138.1| 417|Homo sapiens protein phosphatase 4,
regulatory subunit 2 protein.
Length = 417
Score = 33.5 bits (73), Expect = 0.77
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 247 QESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAKVFFSSPMTSN 92
+++ S G++ P P RS++ TPR KV S+PMT+N
Sbjct: 140 EKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRPKVSLSAPMTTN 191
>BC128136-1|AAI28137.1| 417|Homo sapiens protein phosphatase 4,
regulatory subunit 2 protein.
Length = 417
Score = 33.5 bits (73), Expect = 0.77
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 247 QESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAKVFFSSPMTSN 92
+++ S G++ P P RS++ TPR KV S+PMT+N
Sbjct: 140 EKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRPKVSLSAPMTTN 191
>BC110889-1|AAI10890.1| 360|Homo sapiens PPP4R2 protein protein.
Length = 360
Score = 33.5 bits (73), Expect = 0.77
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 247 QESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAKVFFSSPMTSN 92
+++ S G++ P P RS++ TPR KV S+PMT+N
Sbjct: 83 EKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRPKVSLSAPMTTN 134
>BC100281-1|AAI00282.1| 271|Homo sapiens PPP4R2 protein protein.
Length = 271
Score = 33.5 bits (73), Expect = 0.77
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 247 QESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAKVFFSSPMTSN 92
+++ S G++ P P RS++ TPR KV S+PMT+N
Sbjct: 84 EKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRPKVSLSAPMTTN 135
>AJ271448-1|CAB93534.2| 495|Homo sapiens protein phosphatase 4
regulatory subunit 2 protein.
Length = 495
Score = 33.5 bits (73), Expect = 0.77
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 247 QESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAKVFFSSPMTSN 92
+++ S G++ P P RS++ TPR KV S+PMT+N
Sbjct: 218 EKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRPKVSLSAPMTTN 269
>AF327345-1|AAL56006.1| 417|Homo sapiens hypothetical protein
SBBI57 protein.
Length = 417
Score = 33.5 bits (73), Expect = 0.77
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 247 QESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAKVFFSSPMTSN 92
+++ S G++ P P RS++ TPR KV S+PMT+N
Sbjct: 140 EKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRPKVSLSAPMTTN 191
>BC034607-1|AAH34607.1| 1142|Homo sapiens ASPM protein protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 559 MMDEHITTEENQGSNLSGPFLPGYPIRP-IVSRITIHWAVVLQRRD 693
M E I ++ + S++S PF+P P+R IVSR+ W + RRD
Sbjct: 1077 MNTERILYKQKKNSSISIPFIPETPVRTRIVSRLKPDWVL---RRD 1119
>AY971956-1|AAY46814.1| 1892|Homo sapiens abnormal spindle-like
microcephaly associated splice variant 1 protein.
Length = 1892
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 559 MMDEHITTEENQGSNLSGPFLPGYPIRP-IVSRITIHWAVVLQRRD 693
M E I ++ + S++S PF+P P+R IVSR+ W + RRD
Sbjct: 1827 MNTERILYKQKKNSSISIPFIPETPVRTRIVSRLKPDWVL---RRD 1869
>AY971955-1|AAY46813.1| 1062|Homo sapiens abnormal spindle-like
microcephaly associated splice variant 3 protein.
Length = 1062
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 559 MMDEHITTEENQGSNLSGPFLPGYPIRP-IVSRITIHWAVVLQRRD 693
M E I ++ + S++S PF+P P+R IVSR+ W + RRD
Sbjct: 997 MNTERILYKQKKNSSISIPFIPETPVRTRIVSRLKPDWVL---RRD 1039
>AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like
microcephaly-associated protein protein.
Length = 3477
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 559 MMDEHITTEENQGSNLSGPFLPGYPIRP-IVSRITIHWAVVLQRRD 693
M E I ++ + S++S PF+P P+R IVSR+ W + RRD
Sbjct: 3412 MNTERILYKQKKNSSISIPFIPETPVRTRIVSRLKPDWVL---RRD 3454
>AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle)
homolog, microcephaly associated (Drosophila) protein.
Length = 3477
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 559 MMDEHITTEENQGSNLSGPFLPGYPIRP-IVSRITIHWAVVLQRRD 693
M E I ++ + S++S PF+P P+R IVSR+ W + RRD
Sbjct: 3412 MNTERILYKQKKNSSISIPFIPETPVRTRIVSRLKPDWVL---RRD 3454
>AL353809-3|CAH72550.1| 1142|Homo sapiens asp (abnormal spindle)
homolog, microcephaly associated (Drosophila) protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 559 MMDEHITTEENQGSNLSGPFLPGYPIRP-IVSRITIHWAVVLQRRD 693
M E I ++ + S++S PF+P P+R IVSR+ W + RRD
Sbjct: 1077 MNTERILYKQKKNSSISIPFIPETPVRTRIVSRLKPDWVL---RRD 1119
>AK001411-1|BAA91676.1| 726|Homo sapiens protein ( Homo sapiens
cDNA FLJ10549 fis, clone NT2RP2001976, moderately
similar to Mus musculus calmodulin-binding protein SHA1
mRNA. ).
Length = 726
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 559 MMDEHITTEENQGSNLSGPFLPGYPIRP-IVSRITIHWAVVLQRRD 693
M E I ++ + S++S PF+P P+R IVSR+ W + RRD
Sbjct: 661 MNTERILYKQKKNSSISIPFIPETPVRTRIVSRLKPDWVL---RRD 703
>AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein.
Length = 3477
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 559 MMDEHITTEENQGSNLSGPFLPGYPIRP-IVSRITIHWAVVLQRRD 693
M E I ++ + S++S PF+P P+R IVSR+ W + RRD
Sbjct: 3412 MNTERILYKQKKNSSISIPFIPETPVRTRIVSRLKPDWVL---RRD 3454
>AL121673-4|CAC28600.1| 430|Homo sapiens C20orf59 protein.
Length = 430
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 212 SPGLTTTWSAFLSPSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPW 352
S GLT W ++ LLS A GV Q+R PV +N++PW
Sbjct: 184 SGGLTLLWVWYVYRYLLSEKDLILALGVLAQSR----PVSRHNRVPW 226
>AL121673-2|CAH72268.1| 436|Homo sapiens C20orf59 protein.
Length = 436
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 212 SPGLTTTWSAFLSPSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPW 352
S GLT W ++ LLS A GV Q+R PV +N++PW
Sbjct: 190 SGGLTLLWVWYVYRYLLSEKDLILALGVLAQSR----PVSRHNRVPW 232
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 30.3 bits (65), Expect = 7.2
Identities = 24/71 (33%), Positives = 32/71 (45%)
Frame = -3
Query: 301 LSYTSGGWRTGITQ*TRRQESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAK 122
LS T T +T T S P + E GTGI I G +S+P TP + A
Sbjct: 3007 LSRTPADTSTPVTTSTEASSS-PTTAE-GTGIPISTPSEGSTPLTSIPVSTTPVAIPEAS 3064
Query: 121 VFFSSPMTSNS 89
++P+ SNS
Sbjct: 3065 TLSTTPVDSNS 3075
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 30.3 bits (65), Expect = 7.2
Identities = 24/71 (33%), Positives = 32/71 (45%)
Frame = -3
Query: 301 LSYTSGGWRTGITQ*TRRQESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAK 122
LS T T +T T S P + E GTGI I G +S+P TP + A
Sbjct: 3007 LSRTPADTSTPVTTSTEASSS-PTTAE-GTGIPISTPSEGSTPLTSIPVSTTPVAIPEAS 3064
Query: 121 VFFSSPMTSNS 89
++P+ SNS
Sbjct: 3065 TLSTTPVDSNS 3075
>AF457575-1|AAM10835.1| 326|Homo sapiens death effector
domain-containing protein FLAME-3 protein.
Length = 326
Score = 30.3 bits (65), Expect = 7.2
Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
Frame = -3
Query: 286 GGWRTGITQ*TRRQESRPRSCESGTGILIPEGRPGLKSRSSLPSKPTPRSNVMAKVFFSS 107
G W TG R++ SR R SG G P + S P++P+ V +
Sbjct: 145 GQWETGSPPTKRQRRSRGRP--SGGARRRRRGAPAAPQQQSEPARPSSEGKVTCDIRLRV 202
Query: 106 PMTSNSRNPSLKTAM-PLRPSCKAT*LSIFHTGT 8
P+L+ + RP A L +F T
Sbjct: 203 RAEYREHGPALEQGVASRRPQALARQLDVFGQAT 236
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,797,714
Number of Sequences: 237096
Number of extensions: 2625442
Number of successful extensions: 6401
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6401
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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