Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0253
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   9.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   9.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   9.0  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.0  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.0  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 163 IEVYLGDIGIYFSNYRLVYRVSQK*WIILKHLHSRA 56
           I ++    G+Y S++ LV     + + +LK L+ RA
Sbjct: 128 IMMFFRMFGLYLSSFILVCISVDRFYAVLKPLYLRA 163


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 163 IEVYLGDIGIYFSNYRLVYRVSQK*WIILKHLHSRA 56
           I ++    G+Y S++ LV     + + +LK L+ RA
Sbjct: 128 IMMFFRMFGLYLSSFILVCISVDRFYAVLKPLYLRA 163


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 499 FVCENPLDIDIRFD*KVPTPP 437
           ++ ++PL     FD K+P PP
Sbjct: 719 YMLQSPLTPHEAFDVKLPPPP 739


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 499 FVCENPLDIDIRFD*KVPTPP 437
           ++ ++PL     FD K+P PP
Sbjct: 611 YMLQSPLTPHEAFDVKLPPPP 631


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = +2

Query: 398  VLTIMFLVQSSYGRWRWNFSIKSNI 472
            ++  +  ++  Y   +W F +K+NI
Sbjct: 1281 LIVFLLTLKKDYLHIKWPFGVKTNI 1305


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = +2

Query: 398  VLTIMFLVQSSYGRWRWNFSIKSNI 472
            ++  +  ++  Y   +W F +K+NI
Sbjct: 1281 LIVFLLTLKKDYLHIKWPFGVKTNI 1305


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 386 QKGSVLTIMFLVQSSYGRWRWN 451
           Q   +LT++  + S   +WR+N
Sbjct: 127 QPHQILTLLMDIDSLITKWRYN 148


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 386 QKGSVLTIMFLVQSSYGRWRWN 451
           Q   +LT++  + S   +WR+N
Sbjct: 287 QPHQILTLLMDIDSLITKWRYN 308


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 386 QKGSVLTIMFLVQSSYGRWRWN 451
           Q   +LT++  + S   +WR+N
Sbjct: 287 QPHQILTLLMDIDSLITKWRYN 308


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = +1

Query: 268 RKTLCWCNNYGVI-KINRYNEMVRLNSDIKPSTNNSNHSPSEGQCAH 405
           R+   W  N  +  K N   +  +  ++   +TNN NH    G   H
Sbjct: 285 RQVKIWFQNRRMKNKKNSQRQAAQQQNNNNAATNNQNHHHHAGHHIH 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,904
Number of Sequences: 336
Number of extensions: 3293
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)