Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0252
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.11 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    27   0.19 
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    26   0.25 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   5.4  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   5.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   5.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.4  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 386 SSNAFRFEGWGSRCNYTETLELISQGGWRI 475
           + N+ ++ G      Y E +EL  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +1

Query: 100 ILLTSVQDRKII---IVY-SFLVYFLFASSSYSCHLIACSSPIVQPSPYFYY 243
           ++   VQ  KI+   +VY SFL     A   Y CH+   +   V+   YF+Y
Sbjct: 261 VICVLVQSEKIVWLHLVYISFLGIICAADVFYICHVCYATIQEVRAKIYFFY 312


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 316 RLKAYTTSGHGFSERESKIWLSDFGSKNKAKV 221
           R KA   +  G SER+ KIW  +  +K + +V
Sbjct: 184 RRKAELANSLGLSERQVKIWFQNRRAKERKQV 215


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 133  IIVYSFLVYFLFASSSYSCHLIACSSPIVQPSPYFYY 243
            ++  SFL     A   Y CH+   +   V+   YF+Y
Sbjct: 995  LVYISFLGIICAADVFYICHVCYATIQEVRAKIYFFY 1031



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 100 ILLTSVQDRKIIIVYSFLVYFLFASS-SYSCHLIACSS 210
           +++ S Q   + ++Y FLV  ++A+   Y CH + CS+
Sbjct: 620 VIVQSEQIAWLHLLYIFLVGIMYAADVFYICH-VCCST 656


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 583 PDETSKLASFFIYCLDGWKSSEPTW 509
           P E  KL +FF+  L  W    PT+
Sbjct: 6   PLEAFKLNTFFLKALTVWHVENPTY 30


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 310 KAYTTSGHGFSERESKIWLSDFGSKNKAKVV 218
           K +  + HG       IW  D+ +K   KV+
Sbjct: 197 KTFFGARHGLETLSQLIWWDDYETKGALKVL 227


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 632 GVGYEPGAKLNPEILPT 682
           G  Y PG++ +P ++PT
Sbjct: 753 GQAYFPGSRFHPFLIPT 769


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 392 NAFRFEGWGSRCNYTETLELISQGGW 469
           +A R+ G      Y E +E  + GGW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 305 SFKPLLVVGPLVSPHD*VPPPRLFLP*SS 391
           +FK  + +G    P    PPP  F P +S
Sbjct: 189 AFKRTIALGAFYQPLQPFPPPYPFYPGTS 217


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 332 PLVSPHD*VPPP 367
           P V PH  VPPP
Sbjct: 12  PTVLPHQEVPPP 23


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 286 GFSERESKIWLSDFGSKNK 230
           G SER+ KIW  +  +K +
Sbjct: 195 GLSERQIKIWFQNRRAKER 213


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 280 SERESKIWLSDFGSKNK 230
           +ER+ KIW  +   KNK
Sbjct: 283 TERQVKIWFQNRRMKNK 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,966
Number of Sequences: 336
Number of extensions: 4012
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)