Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0249
(667 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 181 1e-44
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 156 5e-37
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 145 7e-34
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 144 1e-33
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 144 2e-33
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 143 3e-33
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 142 9e-33
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 140 4e-32
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 139 5e-32
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 133 3e-30
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 132 1e-29
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 128 9e-29
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 128 1e-28
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 128 1e-28
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 124 3e-27
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 123 4e-27
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 122 6e-27
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 122 1e-26
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 120 2e-26
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 119 7e-26
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 118 1e-25
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 116 7e-25
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 116 7e-25
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 113 3e-24
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 111 1e-23
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 111 1e-23
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 109 4e-23
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 106 4e-22
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 102 7e-21
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 100 3e-20
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 99 5e-20
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 3e-19
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 94 3e-18
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 92 1e-17
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 92 1e-17
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 91 2e-17
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 89 7e-17
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 89 9e-17
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 87 5e-16
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 86 8e-16
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 85 1e-15
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 84 3e-15
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 83 4e-15
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 83 6e-15
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 83 8e-15
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 83 8e-15
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 82 1e-14
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 81 2e-14
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 81 2e-14
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 81 2e-14
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 81 2e-14
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 81 3e-14
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 81 3e-14
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 79 7e-14
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 79 1e-13
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 78 2e-13
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 78 2e-13
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 77 5e-13
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 75 2e-12
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 75 2e-12
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 73 6e-12
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 72 1e-11
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 72 1e-11
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 72 1e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 72 1e-11
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 72 1e-11
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 72 1e-11
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 72 1e-11
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 71 3e-11
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 70 4e-11
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 70 4e-11
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 70 6e-11
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 70 6e-11
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 69 8e-11
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 69 1e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 68 2e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 68 2e-10
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 68 2e-10
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 67 3e-10
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 67 3e-10
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 67 4e-10
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 66 5e-10
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 66 5e-10
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 66 5e-10
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 66 9e-10
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 64 2e-09
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 64 2e-09
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 64 3e-09
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 64 3e-09
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 63 5e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 63 7e-09
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 62 9e-09
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 62 2e-08
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 58 3e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 57 3e-07
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 53 7e-06
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 3e-05
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 49 9e-05
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 49 9e-05
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 44 0.003
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 44 0.003
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 42 0.013
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 40 0.041
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 40 0.071
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 39 0.12
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.2
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 35 1.5
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.0
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.0
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 34 2.7
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 34 2.7
UniRef50_Q8SH27 Cluster: Cytochrome oxidase subunit I; n=1; Bolb... 34 3.5
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 3.5
UniRef50_Q54M80 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 181 bits (441), Expect = 1e-44
Identities = 90/144 (62%), Positives = 100/144 (69%)
Frame = +1
Query: 61 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 240
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 241 NLCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 420
NLCY + ++ + YFTSAT+IIAVPTGIKIF LAT HGTQIN
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQIN 126
Query: 421 YNPNIL*RLGFVFLFTVGGLTGVI 492
Y+P+IL LGFVFLFTVGGLTGVI
Sbjct: 127 YSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 156 bits (378), Expect = 5e-37
Identities = 71/86 (82%), Positives = 79/86 (91%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLAGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH
Sbjct: 181 LSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISH 240
Query: 191 IISQERGKKETFGCLGIIYAIQQLGY 268
+I E GKKETFG LG+IYA+ +G+
Sbjct: 241 MIFNESGKKETFGMLGMIYAMLTIGF 266
Score = 130 bits (313), Expect = 4e-29
Identities = 69/156 (44%), Positives = 88/156 (56%)
Frame = +1
Query: 196 FTRKRKKRNFWLFRNNLCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGI 375
F KK F + IG LGFIV AHH+FT+G+D+DTRAYFTSAT+IIA+PTGI
Sbjct: 243 FNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGI 302
Query: 376 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSXXXXXXXXXXXXXXXX 555
KIF +AT G ++ N IL +GF+FLFTVGGLTGV+L+NSS
Sbjct: 303 KIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGVVLSNSSVDVVLHDTYYGVAHFH 362
Query: 556 XXXQ*EQYLQLLGDLLTG*SLIYRPFIKFYILKIHF 663
+LG + + + + Y LKIHF
Sbjct: 363 YVLSMGAVFSILGGFIYWFPMFFGLMMNEYFLKIHF 398
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 145 bits (352), Expect = 7e-34
Identities = 64/86 (74%), Positives = 76/86 (88%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH
Sbjct: 197 LSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISH 256
Query: 191 IISQERGKKETFGCLGIIYAIQQLGY 268
I++ GKKE FG +G+++A+ +G+
Sbjct: 257 IVTYYSGKKEPFGYMGMVWAMMSIGF 282
Score = 129 bits (312), Expect = 5e-29
Identities = 57/84 (67%), Positives = 74/84 (88%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+IG LGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +
Sbjct: 279 SIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAV 338
Query: 436 L*RLGFVFLFTVGGLTGVILANSS 507
L LGF+FLFTVGGLTG++LANSS
Sbjct: 339 LWALGFIFLFTVGGLTGIVLANSS 362
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTYYVVAHFHYVLS
Sbjct: 364 DIVLHDTYYVVAHFHYVLS 382
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 144 bits (350), Expect = 1e-33
Identities = 64/85 (75%), Positives = 75/85 (88%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH
Sbjct: 197 LSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISH 256
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
+++ GKKE FG +G+++A+ +G
Sbjct: 257 VVAYYAGKKEPFGYMGMVWAMMAIG 281
Score = 130 bits (315), Expect = 2e-29
Identities = 60/84 (71%), Positives = 73/84 (86%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AIGLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +
Sbjct: 279 AIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPM 338
Query: 436 L*RLGFVFLFTVGGLTGVILANSS 507
L LGF+FLFTVGGLTG++LANSS
Sbjct: 339 LWALGFIFLFTVGGLTGIVLANSS 362
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTYYVVAHFHYVLS
Sbjct: 364 DIVLHDTYYVVAHFHYVLS 382
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 144 bits (349), Expect = 2e-33
Identities = 63/86 (73%), Positives = 76/86 (88%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH
Sbjct: 198 LSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISH 257
Query: 191 IISQERGKKETFGCLGIIYAIQQLGY 268
+++ GKKE FG +G+++A+ +G+
Sbjct: 258 VVTYYAGKKEPFGYMGMVWAMLSIGF 283
Score = 59.3 bits (137), Expect = 8e-08
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 391 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 507
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSS 363
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTYYVVAHFHYVLS
Sbjct: 365 DIALHDTYYVVAHFHYVLS 383
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 143 bits (347), Expect = 3e-33
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH
Sbjct: 197 LSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISH 256
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
+++ GKKE FG +G+++A+ +G
Sbjct: 257 VVTYYAGKKEPFGYMGMVWAMMAIG 281
Score = 130 bits (315), Expect = 2e-29
Identities = 60/84 (71%), Positives = 73/84 (86%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AIGLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +
Sbjct: 279 AIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPM 338
Query: 436 L*RLGFVFLFTVGGLTGVILANSS 507
L LGF+FLFTVGGLTG++LANSS
Sbjct: 339 LWALGFIFLFTVGGLTGIVLANSS 362
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTYYVVAHFHYVLS
Sbjct: 364 DIVLHDTYYVVAHFHYVLS 382
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 142 bits (343), Expect = 9e-33
Identities = 67/85 (78%), Positives = 74/85 (87%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLAGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH
Sbjct: 200 LSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISH 259
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
I+S G K FG LG++YA+ +G
Sbjct: 260 IVSTFSG-KPVFGYLGMVYAMISIG 283
Score = 122 bits (293), Expect = 1e-26
Identities = 55/83 (66%), Positives = 71/83 (85%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+IG+LGF+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +
Sbjct: 281 SIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPM 340
Query: 436 L*RLGFVFLFTVGGLTGVILANS 504
L +GF+FLFT+GGLTG++LANS
Sbjct: 341 LFAVGFIFLFTIGGLTGIVLANS 363
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTYYVVAHFHYVLS
Sbjct: 366 DIALHDTYYVVAHFHYVLS 384
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 140 bits (338), Expect = 4e-32
Identities = 70/99 (70%), Positives = 78/99 (78%)
Frame = +1
Query: 211 KKRNFWLFRNNLCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 390
KK F AIGLLGF+V AHH+FTVG+D+DTRAYFTSAT+IIAVPTGIK+F
Sbjct: 177 KKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKVFSW 236
Query: 391 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 507
LAT HGTQI Y+P L LGFVFLFTVGGLTGV+LANSS
Sbjct: 237 LATFHGTQILYSPVTLWTLGFVFLFTVGGLTGVVLANSS 275
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +2
Query: 146 EVYILILPGFGIISHIISQERGKKETFGCLGIIYAIQQLG 265
EVYILILPGFG+ISHIISQE GKKE FG LG+IYA+ +G
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIG 194
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTYYVVAHFHYVLS
Sbjct: 277 DIVLHDTYYVVAHFHYVLS 295
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 139 bits (337), Expect = 5e-32
Identities = 64/85 (75%), Positives = 74/85 (87%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLAGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SH
Sbjct: 197 LSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSH 256
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
I+S G K FG LG++YA+ +G
Sbjct: 257 IVSAFSG-KPVFGYLGMVYAMFSIG 280
Score = 116 bits (278), Expect = 7e-25
Identities = 53/84 (63%), Positives = 70/84 (83%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+IG+LGF+V +HH++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +
Sbjct: 278 SIGILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPM 337
Query: 436 L*RLGFVFLFTVGGLTGVILANSS 507
L LGF+ LFT+GGLTGVILAN+S
Sbjct: 338 LFALGFIALFTIGGLTGVILANAS 361
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 133 bits (322), Expect = 3e-30
Identities = 61/85 (71%), Positives = 73/85 (85%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
L++PVLAGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISH
Sbjct: 205 LAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISH 264
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
I+S +K FG +G++YA+ +G
Sbjct: 265 IVS-TFSRKPVFGYIGMVYAMVSIG 288
Score = 117 bits (281), Expect = 3e-25
Identities = 54/83 (65%), Positives = 70/83 (84%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+IG+LGFIV AHH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +
Sbjct: 286 SIGVLGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPM 345
Query: 436 L*RLGFVFLFTVGGLTGVILANS 504
L +GF+FLFT+GGLTG++LANS
Sbjct: 346 LFAIGFIFLFTIGGLTGIVLANS 368
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI+LHDTYYVVAHFHYVLS
Sbjct: 371 DISLHDTYYVVAHFHYVLS 389
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 132 bits (318), Expect = 1e-29
Identities = 61/84 (72%), Positives = 74/84 (88%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AIGLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +
Sbjct: 44 AIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPM 103
Query: 436 L*RLGFVFLFTVGGLTGVILANSS 507
L LGF+FLFTVGGLTG+ILANSS
Sbjct: 104 LWALGFIFLFTVGGLTGIILANSS 127
Score = 71.3 bits (167), Expect = 2e-11
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +2
Query: 131 FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYAIQQLG 265
FFGHPEVYILILPGFG+ISHI++ GKKE FG +G+++A+ +G
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIG 46
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTYYVVAHFHYVLS
Sbjct: 129 DIVLHDTYYVVAHFHYVLS 147
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 128 bits (310), Expect = 9e-29
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLAGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISH
Sbjct: 303 LSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISH 362
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
I++ KK FG L ++YA+ +G
Sbjct: 363 IVA-TFSKKPIFGYLPMVYALVAIG 386
Score = 94.3 bits (224), Expect = 2e-18
Identities = 44/83 (53%), Positives = 63/83 (75%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AIG LGF+V AHH++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++ +
Sbjct: 384 AIGGLGFVVWAHHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPM 443
Query: 436 L*RLGFVFLFTVGGLTGVILANS 504
+ LGF+FLFT+GG TG+IL+ +
Sbjct: 444 MFALGFIFLFTLGGTTGIILSQA 466
Score = 40.3 bits (90), Expect = 0.041
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = +3
Query: 495 SQFFYDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXNWI 611
SQ D HDTYYVVAHFHYV+S WI
Sbjct: 464 SQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWI 502
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 128 bits (309), Expect = 1e-28
Identities = 61/85 (71%), Positives = 70/85 (82%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLA AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS
Sbjct: 224 LSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIIST 283
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
+IS K FG LG++YA+ +G
Sbjct: 284 VIS-ANSNKNVFGYLGMVYAMMSIG 307
Score = 118 bits (283), Expect = 2e-25
Identities = 52/84 (61%), Positives = 72/84 (85%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+IGLLGFIV +HH++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +
Sbjct: 305 SIGLLGFIVWSHHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPM 364
Query: 436 L*RLGFVFLFTVGGLTGVILANSS 507
L LGFV +FT+GGL+GV+LAN+S
Sbjct: 365 LFALGFVVMFTIGGLSGVVLANAS 388
Score = 40.7 bits (91), Expect = 0.031
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
+I HDTYYVVAHFHYVLS
Sbjct: 390 NIAFHDTYYVVAHFHYVLS 408
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 128 bits (309), Expect = 1e-28
Identities = 61/85 (71%), Positives = 69/85 (81%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLAG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS
Sbjct: 198 LSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIIST 257
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
IS K FG LG++YA+ +G
Sbjct: 258 TIS-ANSNKSVFGYLGMVYAMCSIG 281
Score = 124 bits (298), Expect = 3e-27
Identities = 54/84 (64%), Positives = 75/84 (89%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+IG+LGF+V +HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++
Sbjct: 279 SIGILGFVVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSL 338
Query: 436 L*RLGFVFLFTVGGLTGVILANSS 507
L LGFVF+FT+GGL+GV+LAN+S
Sbjct: 339 LFALGFVFMFTIGGLSGVVLANAS 362
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXNWIIPYLQAFH*ILYTKNSFF 665
DI HDTYYVVAHFHYVLS WI L + +LY+K F+
Sbjct: 364 DIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLYSKAHFW 415
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 124 bits (298), Expect = 3e-27
Identities = 56/85 (65%), Positives = 69/85 (81%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVL+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH
Sbjct: 198 LSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISH 257
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
++S KK FG + ++YA+ +G
Sbjct: 258 VVS-TYSKKPVFGEISMVYAMASIG 281
Score = 76.2 bits (179), Expect = 7e-13
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 432
+IGLLGF+V +HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 279 SIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 123 bits (296), Expect = 4e-27
Identities = 55/84 (65%), Positives = 72/84 (85%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AIG+LGF+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + +
Sbjct: 256 AIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPL 315
Query: 436 L*RLGFVFLFTVGGLTGVILANSS 507
LGFVFLFT+GGLTG++LANSS
Sbjct: 316 FWALGFVFLFTLGGLTGIVLANSS 339
Score = 108 bits (260), Expect = 1e-22
Identities = 47/68 (69%), Positives = 57/68 (83%)
Frame = +2
Query: 62 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGI 241
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E FG LG+
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 242 IYAIQQLG 265
+YA+ +G
Sbjct: 251 VYAMIAIG 258
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
D+ LHDTYYVVAHFHYVLS
Sbjct: 341 DVVLHDTYYVVAHFHYVLS 359
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 122 bits (295), Expect = 6e-27
Identities = 56/85 (65%), Positives = 67/85 (78%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVL+ IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SH
Sbjct: 198 LSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSH 257
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
I+S KK FG + ++YA+ +G
Sbjct: 258 IVS-TYSKKPVFGEISMVYAMASIG 281
Score = 114 bits (274), Expect = 2e-24
Identities = 54/84 (64%), Positives = 69/84 (82%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+IGLLGF+V +HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I +
Sbjct: 279 SIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPM 338
Query: 436 L*RLGFVFLFTVGGLTGVILANSS 507
+ + F+FLFTVGGLTGV+LAN+S
Sbjct: 339 MFAIAFLFLFTVGGLTGVVLANAS 362
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 122 bits (293), Expect = 1e-26
Identities = 58/85 (68%), Positives = 68/85 (80%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
L+LPVLA AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS
Sbjct: 240 LALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQ 299
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
I+S +K FG LG+ YA+ +G
Sbjct: 300 IVS-TFSRKPVFGYLGMAYAMVAIG 323
Score = 108 bits (259), Expect = 1e-22
Identities = 48/82 (58%), Positives = 67/82 (81%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AIG++GF+V AHH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ +
Sbjct: 321 AIGVVGFVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPM 380
Query: 436 L*RLGFVFLFTVGGLTGVILAN 501
+ LGF+FLFTVGG+TGV+LAN
Sbjct: 381 VWALGFIFLFTVGGVTGVVLAN 402
Score = 41.5 bits (93), Expect = 0.018
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
D LHDTYYVVAHFHYVLS
Sbjct: 406 DDVLHDTYYVVAHFHYVLS 424
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 120 bits (290), Expect = 2e-26
Identities = 73/157 (46%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLAGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++ + H
Sbjct: 194 LSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDL-VSFH 252
Query: 191 IISQERGKKETFGCLGIIYAIQ-QLGY*DLLFEXXXXXXXXXXXXXXXXXXXXXXXXXXX 367
++ ++ +K + + + L Y DLLFE
Sbjct: 253 MLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFELIMYLPSESMLKLELVLHQQLSLLLSQ 312
Query: 368 XXXKFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 478
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 313 LGLKFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 119 bits (286), Expect = 7e-26
Identities = 55/85 (64%), Positives = 68/85 (80%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
+++PVLA AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SH
Sbjct: 201 VAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSH 260
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
II+ KK FG + +I A+ +G
Sbjct: 261 IIA-TFSKKRVFGHVPMIAAMLMIG 284
Score = 101 bits (241), Expect = 2e-20
Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Frame = +1
Query: 211 KKRNFWLFRNNLCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 390
KKR F IGL+GFIV AHH++T GID T+AYFT+AT++IA+PTGIK+F
Sbjct: 267 KKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAIPTGIKVFNW 326
Query: 391 LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLTGVILANS 504
+AT+ G I Y P GFV LFT+GG+TG+IL+N+
Sbjct: 327 IATMWGGSIWMYTPMYF-AAGFVVLFTIGGITGIILSNA 364
Score = 38.3 bits (85), Expect = 0.16
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
D ++HDT+YVV HFHYVLS
Sbjct: 367 DTSIHDTHYVVGHFHYVLS 385
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 118 bits (284), Expect = 1e-25
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLA IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SH
Sbjct: 287 LSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSH 346
Query: 191 IISQERGKKETFGCLGIIYAIQQL 262
I +FG G+I A+ +
Sbjct: 347 ICMSLSNNDSSFGYYGLICAMASI 370
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-YNPN 432
+I LG +V HH+F VG D T +F+S T+II VPTGIK+F L ++ + +P
Sbjct: 369 SIVCLGSVVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPI 428
Query: 433 IL*RLGFVFLFTVGGLTGVILANSS 507
+ +GF+FLFTVGG+TGV L+ S+
Sbjct: 429 VWWLVGFIFLFTVGGVTGVALSASA 453
Score = 38.7 bits (86), Expect = 0.12
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI HDT++VVAHFHYVLS
Sbjct: 455 DILFHDTWFVVAHFHYVLS 473
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 116 bits (278), Expect = 7e-25
Identities = 52/86 (60%), Positives = 68/86 (79%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
L+LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S
Sbjct: 215 LALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQ 274
Query: 191 IISQERGKKETFGCLGIIYAIQQLGY 268
I+ Q KK FG +G+IYA+ +G+
Sbjct: 275 IV-QVYAKKPIFGKIGMIYAMASIGF 299
Score = 107 bits (258), Expect = 2e-22
Identities = 48/84 (57%), Positives = 67/84 (79%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+IG LGF V +HH+FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +
Sbjct: 296 SIGFLGFCVWSHHMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPL 355
Query: 436 L*RLGFVFLFTVGGLTGVILANSS 507
L +GF+ LFT+GG+TGV++ANSS
Sbjct: 356 LYAVGFIVLFTIGGVTGVVIANSS 379
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 116 bits (278), Expect = 7e-25
Identities = 52/86 (60%), Positives = 68/86 (79%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
L+LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S
Sbjct: 215 LALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQ 274
Query: 191 IISQERGKKETFGCLGIIYAIQQLGY 268
I+ Q KK FG +G+IYA+ +G+
Sbjct: 275 IV-QVYAKKPIFGKIGMIYAMASIGF 299
Score = 37.1 bits (82), Expect = 0.38
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTR 327
+IG LGF V +HH+FTVG+D D R
Sbjct: 296 SIGFLGFCVWSHHMFTVGLDADKR 319
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 113 bits (273), Expect = 3e-24
Identities = 58/97 (59%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
Frame = +1
Query: 223 FWLFRNNLCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 402
FW F L AIG+LGFIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+
Sbjct: 236 FWFFGAML---AIGVLGFIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATV 292
Query: 403 HGTQIN--YNPNIL*RLGFVFLFTVGGLTGVILANSS 507
G+ N + + LGF+FLFT+GGLTG++L+NSS
Sbjct: 293 SGSGRNLIFTTPMAWALGFIFLFTIGGLTGIVLSNSS 329
Score = 83.4 bits (197), Expect = 4e-15
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 139
LSLPVLAGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 198 LSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTYYVVAHFHYVLS
Sbjct: 331 DILLHDTYYVVAHFHYVLS 349
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 111 bits (268), Expect = 1e-23
Identities = 51/76 (67%), Positives = 61/76 (80%)
Frame = +2
Query: 38 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 217
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSS-SNK 290
Query: 218 ETFGCLGIIYAIQQLG 265
FG +G++YA+ +G
Sbjct: 291 PIFGYIGMVYAMMSIG 306
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/69 (65%), Positives = 55/69 (79%)
Frame = +1
Query: 289 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 468
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFT 408
Query: 469 VGGLTGVIL 495
+GGL +L
Sbjct: 409 IGGLLNHLL 417
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 111 bits (267), Expect = 1e-23
Identities = 49/79 (62%), Positives = 62/79 (78%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
S+PVLA +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI
Sbjct: 201 SVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHI 260
Query: 194 ISQERGKKETFGCLGIIYA 250
+ + K FG +G+ +A
Sbjct: 261 LCRSSAKLHVFGKIGMSWA 279
Score = 99 bits (238), Expect = 5e-20
Identities = 48/86 (55%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
Frame = +1
Query: 259 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG---TQINYNP 429
I +GF+V HH+F G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + + +P
Sbjct: 283 IAWMGFLVWGHHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHP 342
Query: 430 NIL*RLGFVFLFTVGGLTGVILANSS 507
+ +G V LFT+GGLTGVILAN++
Sbjct: 343 STFWAIGVVLLFTIGGLTGVILANAA 368
Score = 38.7 bits (86), Expect = 0.12
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 519 LHDTYYVVAHFHYVLS 566
LHD+YYVVAHFHYVLS
Sbjct: 373 LHDSYYVVAHFHYVLS 388
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 109 bits (263), Expect = 4e-23
Identities = 52/66 (78%), Positives = 60/66 (90%)
Frame = +1
Query: 310 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 489
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 490 ILANSS 507
+LANSS
Sbjct: 61 VLANSS 66
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTYYVVAHFHYVLS
Sbjct: 68 DIVLHDTYYVVAHFHYVLS 86
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 106 bits (255), Expect = 4e-22
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 163
LSLPVLAGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 170 LSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 102 bits (245), Expect = 7e-21
Identities = 45/63 (71%), Positives = 52/63 (82%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
L+LPVL G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH
Sbjct: 203 LTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISH 262
Query: 191 IIS 199
+IS
Sbjct: 263 VIS 265
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 LCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN- 420
L I +LG +V HH++T G+++DTRAYFTS TI+I++PTG K+F + T +
Sbjct: 280 LAMGCIAVLGSLVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGM 339
Query: 421 YNPNIL*RLGFVFLFTVGGLTGVILANSS 507
+ + L L F+ FT GG TGVIL N++
Sbjct: 340 IHSSSLLSLLFICTFTFGGTTGVILGNAA 368
Score = 41.9 bits (94), Expect = 0.013
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
D+ LHDTYYV+AHFH+VLS
Sbjct: 370 DVALHDTYYVIAHFHFVLS 388
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 100 bits (240), Expect = 3e-20
Identities = 45/81 (55%), Positives = 63/81 (77%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
++LPVLAG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS
Sbjct: 200 ITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLIST 259
Query: 191 IISQERGKKETFGCLGIIYAI 253
I+ + G + F + +IY++
Sbjct: 260 IV-EVIGFRCVFSTVAMIYSM 279
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/81 (38%), Positives = 52/81 (64%)
Frame = +1
Query: 259 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 438
I +LG V AHH+F VG+D+D+RAYF +I+I +PT +K+F + + T + +
Sbjct: 282 IAILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVY 341
Query: 439 *RLGFVFLFTVGGLTGVILAN 501
+ F+F+F +G +TG+ L+N
Sbjct: 342 FVIMFIFMFLIGAVTGLFLSN 362
Score = 40.7 bits (91), Expect = 0.031
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTY+VV HFHYVLS
Sbjct: 366 DIMLHDTYFVVGHFHYVLS 384
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 99 bits (238), Expect = 5e-20
Identities = 46/80 (57%), Positives = 57/80 (71%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LS+PVLAG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS
Sbjct: 207 LSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISE 266
Query: 191 IISQERGKKETFGCLGIIYA 250
+ K FG + +A
Sbjct: 267 AVLFLTDKDRLFGQTSMTFA 286
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/83 (49%), Positives = 57/83 (68%)
Frame = +1
Query: 259 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 438
I +LG V HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P
Sbjct: 290 IAVLGTSVWGHHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWC 349
Query: 439 *RLGFVFLFTVGGLTGVILANSS 507
F+FLFTVGGL+G+IL+ +S
Sbjct: 350 WTYSFIFLFTVGGLSGIILSAAS 372
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXNWIIPYL 623
DI LHDTYYVVAHFHY LS W +PY+
Sbjct: 374 DIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLW-LPYM 410
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +1
Query: 313 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 477
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 93.9 bits (223), Expect = 3e-18
Identities = 45/81 (55%), Positives = 57/81 (70%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPV+ ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS
Sbjct: 203 LSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISL 262
Query: 191 IISQERGKKETFGCLGIIYAI 253
++S KE FG +I A+
Sbjct: 263 LLSTYT-TKEMFGNQTMILAM 282
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 331 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANS 504
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNA 367
Score = 37.1 bits (82), Expect = 0.38
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
D+ LHDT YVV HFH+VLS
Sbjct: 370 DLALHDTVYVVGHFHFVLS 388
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/68 (64%), Positives = 54/68 (79%)
Frame = +1
Query: 304 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 483
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 484 GVILANSS 507
G++LANSS
Sbjct: 356 GIVLANSS 363
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTYYVVAHFHYVLS
Sbjct: 365 DIALHDTYYVVAHFHYVLS 383
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LSLPVLA IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S
Sbjct: 181 LSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSS 240
Query: 191 II 196
I
Sbjct: 241 SI 242
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/89 (47%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 LCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQIN 420
L +I L+G +V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++
Sbjct: 258 LAMASIALIGSVVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMT 317
Query: 421 YNPNIL*RLGFVFLFTVGGLTGVILANSS 507
N ++ F+ F +GG +G+IL+N+S
Sbjct: 318 LNSLTFLQVSFIVSFAIGGTSGIILSNAS 346
Score = 35.9 bits (79), Expect = 0.88
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 435 FMKIRFCIFIHSRRINRCNFSQFFYDITLHDTYYVVAHFHYVLS 566
F+++ F + + S D LHDTYYVVAHFH V++
Sbjct: 323 FLQVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVA 366
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 91.1 bits (216), Expect = 2e-17
Identities = 44/90 (48%), Positives = 58/90 (64%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
LS PVLA A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS
Sbjct: 208 LSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISE 267
Query: 191 IISQERGKKETFGCLGIIYAIQQLGY*DLL 280
+I +K FG I Y+ + + L+
Sbjct: 268 VI-PVHARKPIFGYRAIAYSSLAISFLGLI 296
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AI LG IV AHH+FT G R +F + T++IAVPTGIKIF T+ G +I N +
Sbjct: 289 AISFLGLIVWAHHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAM 348
Query: 436 L*RLGFVFLFTVGGLTGVILAN 501
L GF+ F +GGLTGV++A+
Sbjct: 349 LFAFGFLSSFMIGGLTGVMVAS 370
Score = 38.7 bits (86), Expect = 0.12
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 507 YDITLHDTYYVVAHFHYVL 563
+DI +HDTY+VV HFHYVL
Sbjct: 373 FDIHVHDTYFVVGHFHYVL 391
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 89.4 bits (212), Expect = 7e-17
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
SLP+L AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 210 SLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLI 267
Query: 194 ISQERGKKETFGCLGIIYAIQQLG 265
++ K+ FG G++Y I +G
Sbjct: 268 LTSII-HKDIFGREGMMYCIISIG 290
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 CYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINY 423
C +IG++G+ V AHH+FTVG+DID+R+YF+ AT II++PT +K+F + T G
Sbjct: 285 CIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRG 344
Query: 424 NPNIL*RLGFVFLFTVGGLTGVILANSS 507
N + F+ F GG TG++L++ S
Sbjct: 345 NNSSWSFFSFLICFCFGGFTGLLLSSGS 372
Score = 37.1 bits (82), Expect = 0.38
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTY+VV HFH VLS
Sbjct: 374 DIMLHDTYFVVGHFHTVLS 392
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 89.0 bits (211), Expect = 9e-17
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 142
LSLPVLAGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 116 LSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/91 (34%), Positives = 36/91 (39%)
Frame = +3
Query: 393 SYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFYDITLHDTYYVVAHFHYVLSXX 572
SY + N N P FM IH + + DI LHDTYYVVAH HYVLS
Sbjct: 243 SYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSXDIILHDTYYVVAHXHYVLSMG 302
Query: 573 XXXXXXXXXXNWIIPYLQAFH*ILYTKNSFF 665
W P + KN+ F
Sbjct: 303 AVFAILAGIVQW-FPLFTGLTLTMNIKNTIF 332
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 86.6 bits (205), Expect = 5e-16
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
+ P+ A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I
Sbjct: 253 AFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLI 311
Query: 194 ISQERGKKETFGCLGIIYAIQQLG 265
+ + G+K FG ++Y+ +G
Sbjct: 312 LPKFSGRK-LFGFKFVVYSTLAIG 334
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/81 (40%), Positives = 52/81 (64%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AIG+L F V AHH+FT GID R+ F + ++ I++P+ +K+F + T+ ++ +
Sbjct: 332 AIGVLSFGVWAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPM 391
Query: 436 L*RLGFVFLFTVGGLTGVILA 498
L +GFV F +GG+TGV LA
Sbjct: 392 LFCIGFVQNFIIGGVTGVFLA 412
Score = 36.7 bits (81), Expect = 0.50
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVL 563
D+ LHDTYYVV HFH+++
Sbjct: 417 DLILHDTYYVVGHFHFIV 434
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 85.8 bits (203), Expect = 8e-16
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
+ P+L AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I
Sbjct: 285 AFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYI 342
Query: 194 ISQERGKKETFGCLGIIYAIQQLG 265
+ + G++ FG ++Y+ +G
Sbjct: 343 LPRFSGRR-LFGFKFVVYSTLAIG 365
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AIG+L F V AHH+F G+D RA F + ++ IAVP+ +K F + T+ I +
Sbjct: 363 AIGVLSFGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPM 422
Query: 436 L*RLGFVFLFTVGGLTGVILAN 501
L +GFV F +GG+TGV LA+
Sbjct: 423 LFSVGFVANFILGGVTGVFLAS 444
Score = 35.5 bits (78), Expect = 1.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVL 563
D+ LH TYYVV HFHY++
Sbjct: 448 DLVLHATYYVVGHFHYIV 465
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
L+LP L A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS
Sbjct: 216 LALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISE 275
Query: 191 II 196
+I
Sbjct: 276 VI 277
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/81 (41%), Positives = 54/81 (66%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AI LLG+ V AHH+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N ++
Sbjct: 297 AIVLLGYGVWAHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSL 356
Query: 436 L*RLGFVFLFTVGGLTGVILA 498
+ F+ F +GGLTG++ A
Sbjct: 357 HFAVAFLLQFVIGGLTGIMFA 377
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVL 563
D L DTY+VVAHFHYVL
Sbjct: 382 DWQLTDTYFVVAHFHYVL 399
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AIG LGF+V AHH+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N ++
Sbjct: 296 AIGFLGFLVWAHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSM 355
Query: 436 L*RLGFVFLFTVGGLTGVILAN 501
L +GF+ +F +GG++GV LA+
Sbjct: 356 LYAIGFISMFIIGGISGVTLAS 377
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/85 (49%), Positives = 53/85 (62%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
+ PVL A LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS +
Sbjct: 216 AFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEV 275
Query: 194 ISQERGKKETFGCLGIIYAIQQLGY 268
+ +K FG + Y+ +G+
Sbjct: 276 L-PTFSRKPIFGYAFVAYSGVAIGF 299
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 83.4 bits (197), Expect = 4e-15
Identities = 36/81 (44%), Positives = 56/81 (69%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
+ +P LAGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S
Sbjct: 153 VGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSE 212
Query: 191 IISQERGKKETFGCLGIIYAI 253
II ++ FG +++A+
Sbjct: 213 II-PVFARRPLFGYTSMVFAV 232
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AI + F + HH+F G+ TR F+ T++IAVPTGIKIF + T++ I++ +
Sbjct: 234 AITAVSFFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQM 293
Query: 436 L*RLGFVFLFTVGGLTGVIL 495
L LG VF+F +GGLTG+ L
Sbjct: 294 LYALGGVFMFLIGGLTGLPL 313
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 83.0 bits (196), Expect = 6e-15
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AI +LGF+V HH FT+G + A+F AT+II++PTG+K+F L TI+ ++ + I
Sbjct: 323 AISVLGFMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPI 382
Query: 436 L*RLGFVFLFTVGGLTGVILA 498
L LGF+ F++GG+TGV+LA
Sbjct: 383 LWTLGFMVTFSIGGMTGVLLA 403
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/79 (48%), Positives = 52/79 (65%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
S P+L GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S +
Sbjct: 243 SFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEV 302
Query: 194 ISQERGKKETFGCLGIIYA 250
+S GK+ FG +IYA
Sbjct: 303 VSTFAGKR-LFGHKSMIYA 320
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 82.6 bits (195), Expect = 8e-15
Identities = 39/85 (45%), Positives = 57/85 (67%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
L++P + A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S
Sbjct: 213 LAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSS 272
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
I++ ++ FG L ++ A+ G
Sbjct: 273 IVATFT-QRPVFGYLAMVMALIATG 296
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/82 (39%), Positives = 53/82 (64%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
A G+L F + HH+F G+ ++FT++++ IAVP G++IF LATI + +
Sbjct: 294 ATGVLAFGLWVHHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPF 353
Query: 436 L*RLGFVFLFTVGGLTGVILAN 501
L +GF+ +F +GGLTGV++A+
Sbjct: 354 LFVIGFIVVFVIGGLTGVMVAS 375
Score = 38.7 bits (86), Expect = 0.12
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 507 YDITLHDTYYVVAHFHYVL 563
+D +HDTY+VVAHFHYVL
Sbjct: 378 FDTQVHDTYFVVAHFHYVL 396
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 82.6 bits (195), Expect = 8e-15
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +2
Query: 20 PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 199
PVL A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+
Sbjct: 361 PVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVP 420
Query: 200 QERGKK--ETFGCLGIIYAIQQLGY 268
++ + IY + +GY
Sbjct: 421 HNNTRRVASKHHMIWAIYVMAYMGY 445
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/80 (30%), Positives = 47/80 (58%)
Frame = +1
Query: 268 LGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RL 447
+G++V HH++ VG+D +R +++ TI+I++P IK+ ++ + + L +
Sbjct: 443 MGYLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSM 502
Query: 448 GFVFLFTVGGLTGVILANSS 507
F+ LF V G TG+ L++ S
Sbjct: 503 SFLLLFLVAGFTGMWLSHVS 522
Score = 35.5 bits (78), Expect = 1.2
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
++++HDT+YVVAHFH +LS
Sbjct: 524 NVSMHDTFYVVAHFHIMLS 542
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 127
LSLPVLAGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 180 LSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 81.4 bits (192), Expect = 2e-14
Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 10/95 (10%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYIL 160
L+ P L +LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+
Sbjct: 227 LAFPALFVGSVMLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIV 286
Query: 161 ILPGFGIISHIISQERGKKETFGCLGIIYAIQQLG 265
LP FGI+S +IS +K FG +++AI +G
Sbjct: 287 ALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIG 320
Score = 66.5 bits (155), Expect = 5e-10
Identities = 33/82 (40%), Positives = 49/82 (59%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AIG L F+V AHH++ G+ +F + T+IIA+PT IK++ + T+ I+ +
Sbjct: 318 AIGALSFVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPM 377
Query: 436 L*RLGFVFLFTVGGLTGVILAN 501
L LGF+ F GGLTG+ L N
Sbjct: 378 LFALGFIITFVNGGLTGLFLGN 399
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 81.0 bits (191), Expect = 2e-14
Identities = 37/83 (44%), Positives = 59/83 (71%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AI ++G+ V AHH+FTVG+D+DTR YF+SAT++IA+PT IK+F + + + +
Sbjct: 36 AIAVVGYFVWAHHMFTVGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAW 95
Query: 436 L*RLGFVFLFTVGGLTGVILANS 504
+ F+ +F +GG+TG++LANS
Sbjct: 96 Y-VVAFLLMFLLGGVTGLVLANS 117
Score = 41.1 bits (92), Expect = 0.023
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
D+ +HD+YYVVAHFHYVLS
Sbjct: 120 DLVMHDSYYVVAHFHYVLS 138
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 149 VYILILPGFGIISHIISQERGKKETFGCLGIIYAI 253
VY++ILP FG++SH + G + LG++YA+
Sbjct: 1 VYVIILPVFGLVSHSL-HRGGLFSLYNMLGMVYAM 34
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 81.0 bits (191), Expect = 2e-14
Identities = 42/85 (49%), Positives = 54/85 (63%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
L P+L A +L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S
Sbjct: 223 LIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSE 281
Query: 191 IISQERGKKETFGCLGIIYAIQQLG 265
II +K FG +G+I+A +G
Sbjct: 282 II-PVFSRKPMFGYVGLIFATLSIG 305
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+IG L V AHH+F G + +F+ T +I+VPTG+K F + T+ I + +
Sbjct: 303 SIGALSMAVWAHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPM 360
Query: 436 L*RLGFVFLFTVGGLTGVILAN 501
+ +GF+ F GGLTG++LA+
Sbjct: 361 IWSVGFMATFLFGGLTGIMLAS 382
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 81.0 bits (191), Expect = 2e-14
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 127
LSLPVLAGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 197 LSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 80.6 bits (190), Expect = 3e-14
Identities = 36/73 (49%), Positives = 46/73 (63%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
+ LP L G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S
Sbjct: 223 IGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSE 282
Query: 191 IISQERGKKETFG 229
+ +K FG
Sbjct: 283 LF-PVYARKPLFG 294
Score = 58.0 bits (134), Expect = 2e-07
Identities = 38/122 (31%), Positives = 59/122 (48%)
Frame = +1
Query: 133 FWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTAIGLLGFIV*AHHIFTVGI 312
F++ ++Y ++ FS F +K F + I L IV AHH+F G
Sbjct: 263 FYSHPAVYVLVLPVFGIFSELFPVYARKPLFGYRFVAIASFGITFLSLIVWAHHMFYTGT 322
Query: 313 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 492
R F T++IA+PTG+K+F L T+ + N +L +G + F G+TGV+
Sbjct: 323 PNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVM 382
Query: 493 LA 498
LA
Sbjct: 383 LA 384
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 80.6 bits (190), Expect = 3e-14
Identities = 36/85 (42%), Positives = 55/85 (64%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
+ P L + +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +
Sbjct: 207 AFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEV 266
Query: 194 ISQERGKKETFGCLGIIYAIQQLGY 268
I +K FG +++AI +G+
Sbjct: 267 I-PVFARKRLFGYSSMVFAIVLIGF 290
Score = 79.4 bits (187), Expect = 7e-14
Identities = 42/96 (43%), Positives = 55/96 (57%)
Frame = +1
Query: 211 KKRNFWLFRNNLCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 390
+KR F IG LGF+V HH+FT G+ A F AT+ IA+PTGIKIF
Sbjct: 272 RKRLFGYSSMVFAIVLIGFLGFMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNW 331
Query: 391 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILA 498
L TI G + Y +L + F+ F +GG+TGV+LA
Sbjct: 332 LLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVMLA 367
Score = 36.3 bits (80), Expect = 0.66
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVL 563
D HDTY+VVAHFHYV+
Sbjct: 372 DYQFHDTYFVVAHFHYVI 389
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/81 (43%), Positives = 54/81 (66%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AI +LGF V HH FT+G +F AT++I++PTG+K+F L TI+ ++ + I
Sbjct: 322 AIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPI 381
Query: 436 L*RLGFVFLFTVGGLTGVILA 498
+ LGF+ F++GG+TGV+LA
Sbjct: 382 MWTLGFMITFSIGGMTGVLLA 402
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
S P+L A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S +
Sbjct: 242 SFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEV 301
Query: 194 ISQERGKKETFGCLGIIYA 250
S GK+ FG +IYA
Sbjct: 302 TSTFAGKR-LFGHHSMIYA 319
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 187
L+ PV+ G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S
Sbjct: 223 LATPVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMS 281
Query: 188 HIISQERGKKETFGCLGIIYA 250
+++ +K FG + Y+
Sbjct: 282 EVVA-TYSRKNIFGYRAVAYS 301
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +1
Query: 214 KRNFWLFRNNLCYTAIGL--LGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 387
++N + +R + Y+++G+ +GF HH+F G F T+I+ V T IK+F
Sbjct: 289 RKNIFGYRA-VAYSSLGIAFVGFFAWGHHMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFN 347
Query: 388 *LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 507
+ T++ + + GF+F GG+TG+ L S
Sbjct: 348 WVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVS 387
Score = 35.5 bits (78), Expect = 1.2
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVL 563
D+ HDTY+VVAHFH+++
Sbjct: 389 DVAWHDTYFVVAHFHFIM 406
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFG 178
+LP LA +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G
Sbjct: 203 ALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMG 262
Query: 179 IISHIISQERGKKETFGCLGI 241
++S +I Q ++ +G I
Sbjct: 263 LVSEVI-QRMARRRAYGYTAI 282
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/96 (34%), Positives = 52/96 (54%)
Frame = +1
Query: 202 RKRKKRNFWLFRNNLCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKI 381
R ++R + + AI + F V HH+FT D R AT+ +A+P+G+K+
Sbjct: 270 RMARRRAYGYTAIAISSVAIASISFAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSGVKV 329
Query: 382 FR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 489
F +AT++G +I +L L F+ F VGG+TGV
Sbjct: 330 FNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGV 365
Score = 37.1 bits (82), Expect = 0.38
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 426 P*YFMKIRFCIFIHSRRINRCNFSQFFYDITLHDTYYVVAHFHYVLS 566
P FM + F +F + F D+ LHDTY+V+ HFHY+++
Sbjct: 346 PMLFM-LTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVN 391
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 77.8 bits (183), Expect = 2e-13
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = +1
Query: 259 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 438
IG +GF V +HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L
Sbjct: 299 IGFMGFTVWSHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAML 358
Query: 439 *RLGFVFLFTVGGLTGVILA 498
+GF+ FT+GGL+G + A
Sbjct: 359 FAIGFIASFTIGGLSGFMHA 378
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
+ P + A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +
Sbjct: 218 AFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEV 277
Query: 194 ISQERGKKETFGCLGIIYAIQQLGY 268
I +K FG ++++ +G+
Sbjct: 278 I-PVHARKMLFGYSVMVFSTALIGF 301
Score = 36.3 bits (80), Expect = 0.66
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVL 563
D HDTY+VVAHFHYVL
Sbjct: 383 DAQQHDTYFVVAHFHYVL 400
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 76.6 bits (180), Expect = 5e-13
Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYILILPGF 175
L +PVL A +LL DR+ T FF GGGDPIL+QHLF FGHPEVYI+ILP +
Sbjct: 230 LFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAW 289
Query: 176 GIISHIIS 199
GI+ ++S
Sbjct: 290 GILGDVLS 297
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/99 (28%), Positives = 50/99 (50%)
Frame = +1
Query: 211 KKRNFWLFRNNLCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 390
+K + W + +L +V HH+F G+ F T++I++P+ + +
Sbjct: 301 RKPHHWYRGTVWAMVLVTVLSAMVYGHHMFMTGMSPLLGEGFMLFTLLISIPSMVVVVNW 360
Query: 391 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 507
+ T+ + Y+ +L LG VF+F VGGLTG+ L + S
Sbjct: 361 VLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDIS 399
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 166
LSLPVL+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 198 LSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
+++P L + +R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S
Sbjct: 195 IAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSE 254
Query: 191 IISQERGKKETFGCLGI 241
++ + ++E FG I
Sbjct: 255 LL-PKMARREIFGYTAI 270
Score = 52.8 bits (121), Expect = 7e-06
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = +1
Query: 289 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 468
HH+FT + + ++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F
Sbjct: 288 HHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFL 347
Query: 469 VGGLTGV 489
+GG+TGV
Sbjct: 348 LGGITGV 354
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 72.9 bits (171), Expect = 6e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 166
LSLPVLA +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 203 LSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
+LP L A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S I
Sbjct: 221 ALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSI 279
Query: 194 ISQERGKKETFGCLGIIYAIQQLGY 268
I ++ FG + I+ +I +G+
Sbjct: 280 IITFT-QRPIFGYIPIVLSIVAIGF 303
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/86 (38%), Positives = 57/86 (66%)
Frame = +1
Query: 244 LCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 423
L AIG +GF + HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G++
Sbjct: 296 LSIVAIGFIGFGLWVHHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKL 355
Query: 424 NPNIL*RLGFVFLFTVGGLTGVILAN 501
+L LGF +F +GGL+GV++A+
Sbjct: 356 ATPLLHVLGFFLIFIIGGLSGVMVAS 381
Score = 38.7 bits (86), Expect = 0.12
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 507 YDITLHDTYYVVAHFHYVL 563
+D+ HDTY+VVAHFHYVL
Sbjct: 384 FDMQAHDTYFVVAHFHYVL 402
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 72.1 bits (169), Expect = 1e-11
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYIL 160
LS PVL A +L+ DR+L TSFF AG GG P+L+QHLF F GHPEVYI+
Sbjct: 249 LSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIV 308
Query: 161 ILPGFGIISHIISQERGKKETFGCLGIIYAI 253
++P GI S +I+ +K FG +I +I
Sbjct: 309 LIPALGITSEVIA-TNARKPIFGYKAMIGSI 338
Score = 66.1 bits (154), Expect = 7e-10
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 259 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 438
I +L FIV AHH+F G++ + F T+IIAVP+ +K F + T+ I + P ++
Sbjct: 341 IAVLSFIVWAHHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMM 400
Query: 439 *RLGFVFLFTVGGLTGVILANSS 507
+G V +F GG+TG+IL N++
Sbjct: 401 FSIGLVSMFISGGVTGIILGNNA 423
Score = 38.3 bits (85), Expect = 0.16
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVL 563
DI LHDTYYVVAHFH V+
Sbjct: 425 DIQLHDTYYVVAHFHLVM 442
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +1
Query: 286 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT-QINYNPNIL*RLGFVFL 462
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ L
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILL 61
Query: 463 FTVGGLTGVILANS 504
FT+GG TGV++ N+
Sbjct: 62 FTLGGTTGVVMGNA 75
Score = 42.3 bits (95), Expect = 0.010
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
DI LHDTYY+VAHFH+VLS
Sbjct: 78 DIALHDTYYIVAHFHFVLS 96
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 139
L+LPVL+ +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 198 LTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/81 (40%), Positives = 53/81 (65%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AI +L F+V HH FT+G ++F+ T+ I++PTG+KIF L T++ +I++ +
Sbjct: 318 AISVLSFLVWTHHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPM 377
Query: 436 L*RLGFVFLFTVGGLTGVILA 498
L L F+ F +GG+TGV+LA
Sbjct: 378 LWALAFIPNFVIGGVTGVMLA 398
Score = 70.5 bits (165), Expect = 3e-11
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
+ PVL A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S I
Sbjct: 238 AFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEI 297
Query: 194 ISQERGKKETFG---CLGIIYAIQQLGY 268
IS +K+ FG +G I AI L +
Sbjct: 298 IS-SFARKQLFGYKAMVGSIIAISVLSF 324
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 71.7 bits (168), Expect = 1e-11
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
L+ PVL ++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP +IS
Sbjct: 216 LATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISE 275
Query: 191 IISQERGKKETFGCLGIIYA 250
++ +K FG + Y+
Sbjct: 276 VVC-AFSRKNIFGYKAVAYS 294
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +1
Query: 244 LCYTAIGL--LGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI 417
+ Y+++G+ +GF HH+FT G F ++ + + T IK+F AT++ I
Sbjct: 291 VAYSSLGIAFVGFFTWGHHMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSI 350
Query: 418 NYNPNIL*RLGFVFLFTVGGLTGVILANSS 507
+ GF+F GG+TG+ LA S
Sbjct: 351 YFATPFAYFAGFLFFLVFGGMTGIALATVS 380
Score = 34.3 bits (75), Expect = 2.7
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVL 563
D+ HDTY++VAHFH+++
Sbjct: 382 DVHWHDTYFIVAHFHFIM 399
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
++LP A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++
Sbjct: 199 VALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYE 258
Query: 191 II 196
++
Sbjct: 259 MV 260
Score = 41.5 bits (93), Expect = 0.018
Identities = 22/104 (21%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +1
Query: 190 YYFTRKRKKRNFWLFRNNL-CYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVP 366
Y + ++ + + + L + + ++GF AHH+F G+ + F T+
Sbjct: 257 YEMVPRFSRKPIYSYNSGLFAFVLLTIVGFSSWAHHMFATGMSFTEKTVFMLGTLAAVPA 316
Query: 367 TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILA 498
+ + +F +AT+ +I ++ ++ +G + LF G GV+ A
Sbjct: 317 SAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGAGGVLNA 360
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 70.5 bits (165), Expect = 3e-11
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 11/91 (12%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEVYIL 160
+LPVL A ++L DR + T FF P AGGG P+L+QHLF F+ HP VYI+
Sbjct: 236 ALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIM 295
Query: 161 ILPGFGIISHIISQERGKKETFGCLGIIYAI 253
ILP G++S I++ +K FG ++Y+I
Sbjct: 296 ILPAMGMVSDILAC-FSRKPIFGYKPMVYSI 325
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 244 LCYTAIGL--LGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI 417
+ Y+ G+ LGFIV HH+F G++ F AT++IA+P+ +K F L T++G ++
Sbjct: 321 MVYSICGIAGLGFIVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKV 380
Query: 418 NYNPNIL*RLGFVFLFTVGGLTGVILA 498
+ +L L FV +F +GGL+G+ +A
Sbjct: 381 QFTTPMLFALSFVSMFVIGGLSGIFMA 407
Score = 39.9 bits (89), Expect = 0.054
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVL 563
DI +HDTY++VAHFHYVL
Sbjct: 412 DIVIHDTYFIVAHFHYVL 429
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 70.1 bits (164), Expect = 4e-11
Identities = 32/82 (39%), Positives = 53/82 (64%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+I L F+V HH FT+G A F A+++I +PTG+KI+ + T+ +I ++ +
Sbjct: 342 SIAFLSFLVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPM 401
Query: 436 L*RLGFVFLFTVGGLTGVILAN 501
+ L F+FLF +GG+TG++LAN
Sbjct: 402 IYSLAFIFLFVIGGITGIMLAN 423
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
++P L L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I
Sbjct: 262 AMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEI 321
Query: 194 ISQERGKKETFGCLGIIYAIQQLGY 268
S G K FG +++A + +
Sbjct: 322 FSTFSG-KVLFGYKSLVWATISIAF 345
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 70.1 bits (164), Expect = 4e-11
Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 166
L+LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 215 LALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/81 (39%), Positives = 52/81 (64%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AIG + + V HH FT+G +F++AT+++ +PTG+K+F T+ ++ + P +
Sbjct: 341 AIGGISWGVWLHHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPM 400
Query: 436 L*RLGFVFLFTVGGLTGVILA 498
L LG +FL VGGLTG++LA
Sbjct: 401 LWALGALFLLLVGGLTGMMLA 421
Score = 66.9 bits (156), Expect = 4e-10
Identities = 35/84 (41%), Positives = 49/84 (58%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
+ P+L A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS I
Sbjct: 261 AFPILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEI 320
Query: 194 ISQERGKKETFGCLGIIYAIQQLG 265
I +K FG ++ A +G
Sbjct: 321 I-PTFAEKPLFGYATMVIATFAIG 343
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 69.7 bits (163), Expect = 6e-11
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 20 PVLAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 196
P++ G +LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +I
Sbjct: 210 PLMVGG-ALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVI 266
Query: 197 SQERGK 214
S GK
Sbjct: 267 STFSGK 272
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/79 (30%), Positives = 47/79 (59%)
Frame = +1
Query: 265 LLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 444
++ F+V HH+F G +I TR +++ TI+I++P + + + T++ ++ Y +L
Sbjct: 289 IISFVVWMHHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFA 348
Query: 445 LGFVFLFTVGGLTGVILAN 501
+G + F +GG TGV L +
Sbjct: 349 VGALLNFIIGGSTGVYLGS 367
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +1
Query: 295 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 468
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 469 VGGLTGVILANSS 507
GG TGVIL N +
Sbjct: 60 FGGTTGVILGNGA 72
Score = 41.9 bits (94), Expect = 0.013
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVLS 566
D+ LHDTYYV+AHFH+VLS
Sbjct: 74 DVALHDTYYVIAHFHFVLS 92
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
SL L A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ +
Sbjct: 208 SLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEV 267
Query: 194 ISQERGKKETFGCLGIIYA 250
S +K FG +++A
Sbjct: 268 AS-TFARKPLFGYRQMVWA 285
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/80 (42%), Positives = 51/80 (63%)
Frame = +1
Query: 259 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 438
I +LG +V AHH+FTVG + F T +IAVPTG+K+F + T+ G ++ +
Sbjct: 289 IVVLGTMVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLY 348
Query: 439 *RLGFVFLFTVGGLTGVILA 498
LGF+F F +GG+TGV+L+
Sbjct: 349 WVLGFIFNFLLGGITGVMLS 368
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 11/73 (15%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYI 157
L+ VL A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI
Sbjct: 234 LAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYI 293
Query: 158 LILPGFGIISHII 196
ILP GI+SHI+
Sbjct: 294 AILPAMGIVSHIL 306
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/84 (32%), Positives = 48/84 (57%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+IG L ++V HH+F G++ + F+ T+II +P + L +++G+++ N
Sbjct: 326 SIGFLSYVVWGHHMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSAS 385
Query: 436 L*RLGFVFLFTVGGLTGVILANSS 507
L LGF+ +F GG++G LA S
Sbjct: 386 LFALGFISMFVSGGVSGFFLAQPS 409
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
++ P + A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S
Sbjct: 223 IAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSM 282
Query: 191 II 196
I+
Sbjct: 283 IV 284
Score = 66.1 bits (154), Expect = 7e-10
Identities = 32/82 (39%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Frame = +1
Query: 262 GLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPN 432
G F + HH+FT GI + +F++A++ +A+P+GI++F +ATI ++ + P+
Sbjct: 306 GFFSFGLWVHHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPS 365
Query: 433 IL*RLGFVFLFTVGGLTGVILA 498
+ LGF+F+FTVGG+TGV++A
Sbjct: 366 LF-VLGFLFIFTVGGVTGVMVA 386
Score = 37.9 bits (84), Expect = 0.22
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVL 563
D +HDTY+VVAHFHYVL
Sbjct: 391 DFQVHDTYFVVAHFHYVL 408
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 187
+++P ++ A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 233 VAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = +1
Query: 265 LLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 444
L+GF V HH+F GI A+F +A+++I++P+ + +F +ATI + + L
Sbjct: 317 LIGFEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYF 376
Query: 445 LGFVFLFTVGGLTGVILA 498
GFV +F VGG++GV+ A
Sbjct: 377 AGFVLMFVVGGVSGVMTA 394
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/82 (41%), Positives = 52/82 (63%)
Frame = +1
Query: 253 TAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 432
+AI LGFIV HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N
Sbjct: 329 SAIASLGFIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTV 388
Query: 433 IL*RLGFVFLFTVGGLTGVILA 498
L + F+ +F VGGL+G+ +A
Sbjct: 389 TLNCIAFLSMFIVGGLSGIFMA 410
Score = 59.7 bits (138), Expect = 6e-08
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYIL 160
+LPVL + + DR T FF P+G GG P+L+QHLF F+ HP VYI+
Sbjct: 239 ALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQPLLWQHLFWFYSHPAVYIM 298
Query: 161 ILPGFGIISHIISQERGKKETFGCLGIIY---AIQQLGY 268
+LP G++S ++S +K FG +++ AI LG+
Sbjct: 299 LLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASLGF 336
Score = 37.5 bits (83), Expect = 0.29
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 510 DITLHDTYYVVAHFHYVL 563
D+ HDTY++VAHFHY+L
Sbjct: 415 DVYFHDTYFIVAHFHYIL 432
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 67.3 bits (157), Expect = 3e-10
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = +1
Query: 118 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCY 252
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCY 46
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 66.9 bits (156), Expect = 4e-10
Identities = 36/80 (45%), Positives = 47/80 (58%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
+S P+L + + DR L+T F+ GG +LY +L +GHPEVYILILP FGI S
Sbjct: 236 ISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSE 295
Query: 191 IISQERGKKETFGCLGIIYA 250
IIS K F + +IYA
Sbjct: 296 IISY-ICVKSVFSYISLIYA 314
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/81 (37%), Positives = 51/81 (62%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
+I +L F+V HH FT+G + +F+ +T+IIA+PTG+KIF + TI + +
Sbjct: 317 SITVLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILF 376
Query: 436 L*RLGFVFLFTVGGLTGVILA 498
+ F+ +F++GG +GVIL+
Sbjct: 377 FWFISFIIIFSIGGFSGVILS 397
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 66.5 bits (155), Expect = 5e-10
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AI L+ IV HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I
Sbjct: 296 AIVLVSCIVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPT 355
Query: 436 L*RLGFVFLFTVGGLTGVIL 495
+GF+F F +GG+TGV L
Sbjct: 356 YWLIGFIFNFLIGGITGVSL 375
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 190
L+L L A + + L S F+P GG P+LYQ F F+ HP VY+++LP GI +
Sbjct: 215 LTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAE 274
Query: 191 IISQERGKKETFGCLGIIYAI 253
+ S +K FG ++Y++
Sbjct: 275 VAS-TMARKPLFGYRVMVYSM 294
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 66.5 bits (155), Expect = 5e-10
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2
Query: 17 LPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 196
+PVL A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I+
Sbjct: 199 VPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIV 258
Query: 197 S 199
+
Sbjct: 259 A 259
Score = 59.7 bits (138), Expect = 6e-08
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +1
Query: 259 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 438
I LL V HH++ G+ R T++I++P G+ + + T++G I++ +L
Sbjct: 280 IVLLSGEVWIHHLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLVGTLYGGSISFETPML 339
Query: 439 *RLGFVFLFTVGGLTGVILA 498
LGF+FLF +GGLTGV LA
Sbjct: 340 YALGFIFLFLIGGLTGVPLA 359
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +2
Query: 20 PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 199
P++ G+I +L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++
Sbjct: 243 PLIIGSI-LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLP 301
Query: 200 QERGK 214
GK
Sbjct: 302 TFVGK 306
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/80 (37%), Positives = 53/80 (66%)
Frame = +1
Query: 259 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 438
+ L F + AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+ + +
Sbjct: 321 MSFLSFGLWAHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMH 380
Query: 439 *RLGFVFLFTVGGLTGVILA 498
LGF+F+F +GG+TGV++A
Sbjct: 381 FILGFLFIFVLGGMTGVMVA 400
Score = 33.1 bits (72), Expect = 6.2
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 507 YDITLHDTYYVVAHFHYVL 563
+++ HD+Y+VVAH HYVL
Sbjct: 404 FNLQAHDSYFVVAHLHYVL 422
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 65.7 bits (153), Expect = 9e-10
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +1
Query: 193 YFTRKRKKRNFWLFRNNLCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 372
Y K FW +CY +G V HH+FTVG+D++T +F+S T+II VPTG
Sbjct: 21 YVKNKYVSSCFWFLWFVVCYVFNMCMGSSVWGHHMFTVGLDVNTAVFFSSVTMIIRVPTG 80
Query: 373 IKIFR*LATIHGTQINYNPNIL 438
IK+F L + +++N IL
Sbjct: 81 IKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 64.5 bits (150), Expect = 2e-09
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +2
Query: 14 SLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 193
+ P + A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I
Sbjct: 283 AFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMI 342
Query: 194 I 196
+
Sbjct: 343 V 343
Score = 56.4 bits (130), Expect = 6e-07
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +1
Query: 244 LCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGT--- 411
L L F + HH+FT GI + ++F +A+ +A+P+G+++F +AT G
Sbjct: 359 LALVGTAFLSFGLWVHHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATG 418
Query: 412 QINYNPNIL*RLGFVFLFTVGGLTGVILA 498
++ L LGF+F+F +GGLTGV++A
Sbjct: 419 RVRIATPTLFILGFLFIFVLGGLTGVMVA 447
Score = 32.7 bits (71), Expect = 8.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 507 YDITLHDTYYVVAHFHYVL 563
+D HD+Y++VAH HYVL
Sbjct: 451 FDWQAHDSYFIVAHLHYVL 469
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 241 NLCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 420
N + +G +V HH+F VG D+ T +F+S T+II VPTGIK+F L + ++
Sbjct: 14 NWLWFLLGAYSNVVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHC 73
Query: 421 YNPNIL-*RLGFVFLFTVGGLTG 486
N I+ +GF+FLFT+GG G
Sbjct: 74 LNTVIVWWIIGFIFLFTMGGRQG 96
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +2
Query: 20 PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 196
P++AG + + +R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 243 PLIAGDLLFEM-ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/79 (35%), Positives = 49/79 (62%)
Frame = +1
Query: 262 GLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL* 441
G L F + HH+FT G+ + +F++A+ + +PTGI++F +AT+ ++ +L
Sbjct: 322 GFLSFGLWVHHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLW 381
Query: 442 RLGFVFLFTVGGLTGVILA 498
G + +FT GGLTGV++A
Sbjct: 382 IAGGLAVFTAGGLTGVMVA 400
Score = 33.5 bits (73), Expect = 4.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 507 YDITLHDTYYVVAHFHYVL 563
+D +HDTY++VAH HY L
Sbjct: 404 FDWQVHDTYFIVAHLHYTL 422
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = +2
Query: 20 PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 196
P++ G+I + L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 217 PLILGSILLEL-ERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/81 (37%), Positives = 50/81 (61%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
A+G+L F + HH+FT GI A+F++A+ ++AVPT +++F + T+ + +
Sbjct: 294 ALGVLSFGLWVHHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPM 353
Query: 436 L*RLGFVFLFTVGGLTGVILA 498
L L F F +GGLTGV++A
Sbjct: 354 LWLLAFFATFVIGGLTGVMVA 374
Score = 35.1 bits (77), Expect = 1.5
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 507 YDITLHDTYYVVAHFHYVL 563
+D +HDTY++VAH HYVL
Sbjct: 378 FDWQVHDTYFIVAHLHYVL 396
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -2
Query: 126 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDN 10
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSES 38
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 62.9 bits (146), Expect = 7e-09
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 181
L+LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 215 LALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = +2
Query: 20 PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 196
P++ G+I + L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 217 PLILGSILLEL-ERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPN 432
++ +L F + HH+FT GI A F++A+ ++AVPT +++F + T+ GT P
Sbjct: 294 SLAVLSFGLWVHHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP- 352
Query: 433 IL*RLGFVFLFTVGGLTGVILA 498
++ L F F +GGLTGV++A
Sbjct: 353 MMWILAFFATFVIGGLTGVMVA 374
Score = 33.1 bits (72), Expect = 6.2
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 507 YDITLHDTYYVVAHFHYVL 563
+D +HDT+++VAH HYVL
Sbjct: 378 FDWQVHDTHFIVAHLHYVL 396
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 166
LSLP+LAG IT+LL+DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 30 LSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +1
Query: 244 LCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 408
L AI LG +V AHH+F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 39 LAMLAIVCLGSVVWAHHMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 131 FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYAI 253
FFGHPEVY+LILP FGI+SHI FG G++ A+
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAM 41
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/100 (30%), Positives = 51/100 (51%)
Frame = +1
Query: 196 FTRKRKKRNFWLFRNNLCYTAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGI 375
FT +R W + + L F+V HH+F GI++ + F + TI I++P +
Sbjct: 283 FTGRRLVGRKWFI---ISMVLVALQSFVVWMHHMFLTGINLPIKTIFMATTIGISLPFDL 339
Query: 376 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIL 495
+F + T+ ++ + L LG + LF +GG+TGV L
Sbjct: 340 MVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITGVFL 379
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Frame = +2
Query: 26 LAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYILILPG 172
L A+ IL +D L T++F D G +L+ HLF FFGHPEVYI+ P
Sbjct: 213 LLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIVFFPA 272
Query: 173 FGIISHIISQERGKK 217
G+++ G++
Sbjct: 273 LGVMAECFQTFTGRR 287
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +1
Query: 295 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 384
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +1
Query: 19 TCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 141
TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 112 TCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 316 IDTRAYFTSATIIIAVPTGIKIFR*LAT 399
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDP 88
LSLPVLA IT+LLTDRNLNT+FFDP
Sbjct: 186 LSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Frame = +2
Query: 20 PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 199
P + G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 230 PEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
Score = 34.3 bits (75), Expect = 2.7
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +1
Query: 256 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 435
AI + +V HH F GI + T I++PT + I +AT+ G + + I
Sbjct: 307 AISVDSVMVFLHHTFMTGIVFAWLMADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPI 366
Query: 436 L*RLGFVFLFTVGGLTGV 489
L L F +GG++GV
Sbjct: 367 LFALAASTSFMIGGVSGV 384
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = -3
Query: 410 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQTINPN 267
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT P+
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQTTLPS 98
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +1
Query: 10 IITTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 129
I++TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 95 IVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNT 73
LSLPVLAGAIT+LLTDRN+NT
Sbjct: 181 LSLPVLAGAITMLLTDRNMNT 201
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 40.3 bits (90), Expect = 0.041
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +1
Query: 259 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 438
+ + G + HH FT D + T T +++PTG + TI G ++ N +L
Sbjct: 372 VSMSGAMSGVHHYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAAVL 430
Query: 439 *RLGFVFLFTVGGLTGVILAN 501
L + F +GGLTG+ A+
Sbjct: 431 LVLMAMMNFLIGGLTGIFNAD 451
Score = 36.7 bits (81), Expect = 0.50
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 74 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 196
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 39.5 bits (88), Expect = 0.071
Identities = 27/80 (33%), Positives = 38/80 (47%)
Frame = +1
Query: 7 EIITTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNF 186
+ TT S S +N N SKL++I+ S PN I ILI T L+ N T I
Sbjct: 100 DYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNSTSIRNRI 159
Query: 187 SYYFTRKRKKRNFWLFRNNL 246
++ +K N ++NNL
Sbjct: 160 THLHNIFSQKSNILYYKNNL 179
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 133
LS PVLA AIT+L R N SFF P G P + F F
Sbjct: 187 LSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 95 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 211
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 483 RCNFSQFFYDITLHDTYYVVAHFHYV 560
R SQ D T HDTYYVVAH HY+
Sbjct: 28 RIALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 143 PEVYILILPGFGIISHIISQERGKK 217
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 101 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 214
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 381 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQF 503
F MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQF 64
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 34.3 bits (75), Expect = 2.7
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 11 LSLPVLAGAITILLTDR 61
LSLPVLAGAIT+LLTDR
Sbjct: 138 LSLPVLAGAITMLLTDR 154
>UniRef50_Q8SH27 Cluster: Cytochrome oxidase subunit I; n=1;
Bolbophorus damnificus|Rep: Cytochrome oxidase subunit I
- Bolbophorus damnificus
Length = 125
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -3
Query: 374 IPVGTAIIIVAEVKYARVSISIPTVNI**AQTINPNNPI 258
IPVG I IV E+ + S PT+NI TI+PN I
Sbjct: 57 IPVGIPITIVVELNNTSLRNSNPTINIWWTHTIHPNTTI 95
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 107 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 214
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q54M80 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 484
Score = 33.5 bits (73), Expect = 4.7
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 SLYFNFTRIWYNFSYYFTRKRKKRNFWLFR-NNLCYTAIGLLGFIV 282
S + N ++ YN +YF +K+KK+ +F+ + Y+ I LL FI+
Sbjct: 47 SEFLNLKQLKYNLKFYFIKKKKKKKKRIFKFISTLYSFISLLVFIL 92
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,831,347
Number of Sequences: 1657284
Number of extensions: 8324058
Number of successful extensions: 17485
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 16861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17437
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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