Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0247
(689 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 23 2.4
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 23 2.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.1
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 22 4.1
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 7.2
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 7.2
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 9.5
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 9.5
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 9.5
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 641 IRRRNLTPPDYSL*TPHTLGPGRSSTWALPWM 546
I +N P Y + PH +G + PWM
Sbjct: 87 ISPQNTPPAGYPMDVPHGMGSPGVNVPEYPWM 118
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 641 IRRRNLTPPDYSL*TPHTLGPGRSSTWALPWM 546
I +N P Y + PH +G + PWM
Sbjct: 87 ISPQNTPPAGYPMDVPHGMGSPGVNVPEYPWM 118
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 35 RMRWLPELVGNVM*ML 82
R RW+P + N+M +L
Sbjct: 877 RRRWVPSTIANIMDLL 892
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 35 RMRWLPELVGNVM*ML 82
R RW+P + N+M +L
Sbjct: 877 RRRWVPSTIANIMDLL 892
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 35 RMRWLPELVGNVM*ML 82
R RW+P + N+M +L
Sbjct: 877 RRRWVPSTIANIMDLL 892
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 35 RMRWLPELVGNVM*ML 82
R RW+P + N+M +L
Sbjct: 877 RRRWVPSTIANIMDLL 892
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 233 ERIFRYESLGFLTFRSKTLQIG 298
ERI+ Y S GFL + QIG
Sbjct: 318 ERIYFYWSFGFLIIQRFIHQIG 339
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 233 ERIFRYESLGFLTFRSKTL 289
ERI+ Y S GFL R+ L
Sbjct: 318 ERIYFYWSFGFLIVRTVCL 336
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 233 ERIFRYESLGFLTFRSKTL 289
ERI+ Y S GFL R+ L
Sbjct: 318 ERIYFYWSFGFLIVRTVCL 336
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 195 GDVFNLSTCFPCLNAF 242
G+ NL TC C N +
Sbjct: 507 GETINLQTCVRCPNNY 522
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +2
Query: 11 EQTINYWIRMRWLPELVGNVM 73
E+ N+W+R + GNV+
Sbjct: 154 ERNSNHWVRSGLFALITGNVL 174
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +2
Query: 11 EQTINYWIRMRWLPELVGNVM 73
E+ N+W+R + GNV+
Sbjct: 110 ERNSNHWVRSGLFALITGNVL 130
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,473
Number of Sequences: 336
Number of extensions: 3508
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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