Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0247
(689 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF174119-1|AAD53865.1| 122|Homo sapiens immunoglobulin heavy ch... 32 2.2
AY909692-1|AAY57140.1| 120|Homo sapiens immunoglobulin heavy ch... 31 2.9
AY003796-1|AAK11768.1| 100|Homo sapiens immunoglobulin mu heavy... 31 3.9
AJ579163-1|CAE45417.1| 125|Homo sapiens immunoglobulin heavy ch... 31 3.9
EF544958-1|ABQ23147.1| 126|Homo sapiens immunoglobulin heavy ch... 31 5.1
DQ524055-1|ABI35567.1| 123|Homo sapiens immunoglobulin heavy ch... 30 6.8
DQ926115-1|ABI50644.1| 123|Homo sapiens immunoglobulin heavy ch... 30 8.9
DQ523988-1|ABI35500.1| 125|Homo sapiens immunoglobulin heavy ch... 30 8.9
AJ244986-1|CAB44120.1| 126|Homo sapiens immunoglobulin mu heavy... 30 8.9
>AF174119-1|AAD53865.1| 122|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 122
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 442 NLLTRDTITIDFPK--YSLKI*TNIAMNANAYWCHRCIQGNAQVLDLPGPRVWG 597
+L +R TI++D K +SLK+ + A + Y+C R ++ +++ L G VWG
Sbjct: 62 SLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVLETSSRDLYYYGMDVWG 115
>AY909692-1|AAY57140.1| 120|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 120
Score = 31.5 bits (68), Expect = 2.9
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 412 SKYLTDDLKANLLTRDTITIDFPKYSLKI*TNI--AMNANAYWCHRCIQGNAQVLDLPGP 585
+KY D +K R TI+ D K SL + N A + Y+C RC +G +D
Sbjct: 57 NKYYADSVKG----RFTISRDNAKNSLYLQMNSLRAEDTAVYYCARCARGGNTAMDSDAF 112
Query: 586 RVWG 597
+WG
Sbjct: 113 DIWG 116
>AY003796-1|AAK11768.1| 100|Homo sapiens immunoglobulin mu heavy
chain variable region protein.
Length = 100
Score = 31.1 bits (67), Expect = 3.9
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 442 NLLTRDTITIDFPK--YSLKI*TNIAMNANAYWCHRCIQGNAQVLDLPGPRVWG 597
+L +R TI++D K +SLK+ + A + Y+C R I G + G VWG
Sbjct: 37 SLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARTIFGVVNMYYYYGMDVWG 90
>AJ579163-1|CAE45417.1| 125|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 125
Score = 31.1 bits (67), Expect = 3.9
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 424 TDDLKANLLTRDTITIDFP--KYSLKI*TNIAMNANAYWCHRCIQGNAQVLDLPGPRVWG 597
T + +L +R I++D ++SLK+ + A + Y+C R + AQ+ D G VWG
Sbjct: 57 TTNYSPSLKSRVIISVDKSNNQFSLKVTSVTAADTAVYYCTRRCRWPAQLTDYYGLGVWG 116
>EF544958-1|ABQ23147.1| 126|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 126
Score = 30.7 bits (66), Expect = 5.1
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 442 NLLTRDTITIDFPK--YSLKI*TNIAMNANAYWCHRCIQGNAQVLDLPGPR--VWG 597
+L +R TI+ID K +SL++ + A + AY+C R + GNA P VWG
Sbjct: 62 SLKSRVTISIDTSKNQFSLRLSSLTAADTAAYFCARGLSGNAGRRGPPAKAMDVWG 117
>DQ524055-1|ABI35567.1| 123|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 123
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 442 NLLTRDTITIDFPK--YSLKI*TNIAMNANAYWCHRCIQGNAQVLDLPGPRVWG 597
+L +R TI++D K +SLK+ + A + Y+C R I G + G VWG
Sbjct: 61 SLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGIYGYVRGYYYYGMDVWG 114
>DQ926115-1|ABI50644.1| 123|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 123
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 403 YIHSKYLTDDLKANLLTRDTITIDFPK--YSLKI*TNIAMNANAYWCHRCIQGNAQVLDL 576
YIH + T+ +L +R T+++D K +SL++ + A +A Y+C R G + +
Sbjct: 50 YIHHSWSTNH-NPSLKSRVTMSVDTSKNLFSLRLRSVTATDAAVYYCARHNFGTVETGAI 108
Query: 577 PGPRVWG 597
+WG
Sbjct: 109 HAFDIWG 115
>DQ523988-1|ABI35500.1| 125|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 125
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 442 NLLTRDTITIDFPK--YSLKI*TNIAMNANAYWCHRCIQGNAQVLDLPGPRVWG 597
+L +R TI++D K +SLK+ + A + Y+C R + +A+ G VWG
Sbjct: 63 SLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVTSSARRRYYCGMDVWG 116
>AJ244986-1|CAB44120.1| 126|Homo sapiens immunoglobulin mu heavy
chain variable region protein.
Length = 126
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 442 NLLTRDTITIDFPK--YSLKI*TNIAMNANAYWCHRCIQGNAQVLDLPGPRVWG 597
+L +R TI++D K +SLK+ + A + Y+C R + G+ G VWG
Sbjct: 64 SLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARHMDGDDYYYYYYGMDVWG 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,612,912
Number of Sequences: 237096
Number of extensions: 1948487
Number of successful extensions: 10818
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10810
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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