Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0244
(662 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18) 39 0.004
SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 38 0.010
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 38 0.010
SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 38 0.010
SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34) 38 0.010
SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 38 0.010
SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 38 0.010
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 38 0.010
SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 38 0.010
SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046) 38 0.010
SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 38 0.010
SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 38 0.010
SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 38 0.010
SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 38 0.010
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 38 0.010
SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38) 38 0.010
SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 37 0.017
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 37 0.017
SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051
SB_28748| Best HMM Match : zf-CCHC (HMM E-Value=0.0022) 35 0.051
SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05) 35 0.051
SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_30386| Best HMM Match : zf-CCHC (HMM E-Value=0.0024) 34 0.12
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 31 0.84
SB_2337| Best HMM Match : zf-CCHC (HMM E-Value=0.0064) 31 0.84
SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_4194| Best HMM Match : Gal_Lectin (HMM E-Value=3.4e-18) 31 1.1
SB_34988| Best HMM Match : zf-CCHC (HMM E-Value=3e-12) 30 1.5
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_29559| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 30 1.5
SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038) 30 1.9
SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 30 1.9
SB_41986| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_23731| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_7525| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-08) 30 1.9
SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 29 2.6
SB_53919| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 29 2.6
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_38788| Best HMM Match : rve (HMM E-Value=4e-06) 29 2.6
SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 29 2.6
SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_48337| Best HMM Match : zf-CCHC (HMM E-Value=9.3) 29 3.4
SB_46068| Best HMM Match : zf-CCHC (HMM E-Value=0.0034) 29 3.4
SB_35030| Best HMM Match : Peptidase_A16_N (HMM E-Value=4.3e-05) 29 3.4
SB_34577| Best HMM Match : zf-CCHC (HMM E-Value=9.3) 29 3.4
SB_17795| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 29 3.4
SB_208| Best HMM Match : zf-C2H2 (HMM E-Value=1.7) 29 3.4
SB_55909| Best HMM Match : Sushi (HMM E-Value=2.3e-31) 29 3.4
SB_52621| Best HMM Match : Peptidase_A16_N (HMM E-Value=2.4e-05) 29 3.4
SB_29912| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00036) 29 3.4
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 29 4.5
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 29 4.5
SB_31317| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029) 28 5.9
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_48624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018) 28 7.8
SB_29933| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.8
>SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 304 SGVTVEAPYKRGTPGQ-CHRCQLYGHSARNCNARPRCVKCLD-DHATTDC 447
S + + P K+ +PG+ C+RC GH AR+C +C KC + H DC
Sbjct: 106 SHIARDCPEKKESPGESCYRCGKSGHFARDCTDDTKCYKCGNTGHIRRDC 155
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNA---RPRCVKCLD-DHATTDCSRVKE 462
C+RC + GH AR+C+A R C +C + H DC K+
Sbjct: 56 CYRCNMSGHFARDCDAESSRDVCYRCQETGHFARDCPNEKK 96
>SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18)
Length = 1138
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 292 RVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKET 465
R R+ ++ P K+ + +CHRC GH A + C+ +C KC C + K+T
Sbjct: 137 RDRILTFILDNPSKQNSFVRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQT 196
Query: 466 ATEPPSCVLCRKQGPRPTTV 525
+ + S + +G +P+ V
Sbjct: 197 SGKAKSASGPKSKGRKPSHV 216
>SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 204 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 263
Query: 520 TV 525
V
Sbjct: 264 HV 265
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 124 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 183
Query: 520 TV 525
V
Sbjct: 184 HV 185
>SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 508
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 133 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 192
Query: 520 TV 525
V
Sbjct: 193 HV 194
>SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34)
Length = 863
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 196 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 255
Query: 520 TV 525
V
Sbjct: 256 HV 257
>SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 382
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 230 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 289
Query: 520 TV 525
V
Sbjct: 290 HV 291
>SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 612
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 263
Query: 520 TV 525
V
Sbjct: 264 HV 265
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 261 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 320
Query: 520 TV 525
V
Sbjct: 321 HV 322
>SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 403
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 124 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 183
Query: 520 TV 525
V
Sbjct: 184 HV 185
>SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046)
Length = 338
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 87 GRCHRCNRQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 146
Query: 520 TV 525
V
Sbjct: 147 HV 148
>SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 438
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 184 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 243
Query: 520 TV 525
V
Sbjct: 244 HV 245
>SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 54 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 113
Query: 520 TV 525
V
Sbjct: 114 HV 115
>SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 263
Query: 520 TV 525
V
Sbjct: 264 HV 265
>SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 297
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 263
Query: 520 TV 525
V
Sbjct: 264 HV 265
>SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 295
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 202 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 261
Query: 520 TV 525
V
Sbjct: 262 HV 263
>SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 204 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 263
Query: 520 TV 525
V
Sbjct: 264 HV 265
>SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 204 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 263
Query: 520 TV 525
V
Sbjct: 264 HV 265
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 84 GRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 143
Query: 520 TV 525
V
Sbjct: 144 HV 145
>SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 1116
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 162 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 221
Query: 520 TV 525
V
Sbjct: 222 HV 223
>SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 899
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 204 GRCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 263
Query: 520 TV 525
V
Sbjct: 264 HV 265
>SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC GH A + C+ C KC C + K+T+ + S + +G +P+
Sbjct: 1021 GRCHRCNKQGHKAADCRCSQNHHCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 1080
Query: 520 TV 525
V
Sbjct: 1081 HV 1082
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATEPPS 483
C+ C GH A C A C KC H T+ C RV+ + PPS
Sbjct: 305 CYNCTKGGHMATKCKAG-NCAKCNSRHHTSICDRVQSSL--PPS 345
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATEPPS 483
C+ C GH A C A C KC H T+ C RV+ + PPS
Sbjct: 199 CYNCTKGGHMATKCKAG-NCAKCNSRHHTSICDRVQSSL--PPS 239
>SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 35.1 bits (77), Expect = 0.051
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 346 GQCHRCQLYGHSARNCNARPRCVKCLDDHAT 438
G C C +GH RNC + C+ C + H T
Sbjct: 342 GLCWGCLTWGHDNRNCKIKKTCISCRELHPT 372
>SB_28748| Best HMM Match : zf-CCHC (HMM E-Value=0.0022)
Length = 297
Score = 35.1 bits (77), Expect = 0.051
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 346 GQCHRCQLYGHSARN--CNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPT 519
G+CHRC H A + C+ +C KC C + K+T+ + S + +G +P+
Sbjct: 204 GRCHRCNKQAHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKGRKPS 263
Query: 520 TV 525
V
Sbjct: 264 HV 265
>SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05)
Length = 410
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKC 420
P +RL ++ Y G P +C C GH C R RC +C
Sbjct: 131 PRTMRLRSFPIKLWYP-GQPAECGYCHQVGHPISTCPVRGRCFRC 174
>SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1322
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 349 QCHRCQLYGHSARNCNARPRCVKCLDDHATTDC--SRVKETATEPPS 483
+C C GH+ C RC+ C H DC + +E EPPS
Sbjct: 527 RCFNCSESGHTRAACYMDQRCMLCGGSHEVDDCTFNCQREEEGEPPS 573
>SB_30386| Best HMM Match : zf-CCHC (HMM E-Value=0.0024)
Length = 90
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 349 QCHRCQLYGHSARNCNARPRCVKCLDDHATTDC--SRVKETATEPPS 483
+C C GH+ C RC+ C H DC + +E EPPS
Sbjct: 19 RCFNCSESGHTRAACYMDQRCMLCGGSHEVDDCTFNCQREEEGEPPS 65
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 331 KRGTPGQCHRCQLYGHSARNCNARPR-CVKCLD-DHATTDCSRVKETATEP 477
K TP CH Q AR C PR C CL H T+C +++ P
Sbjct: 870 KNVTPNSCHHSQREADHAREC---PRCCFSCLKRGHPQTECRSIQKYEKGP 917
>SB_2337| Best HMM Match : zf-CCHC (HMM E-Value=0.0064)
Length = 422
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNC-NARPRCVKCLDDHATTDCSRV-- 456
P R+ +G ++ Y G P C RC GH + C R R + + TT+ R+
Sbjct: 182 PARLTTNGASLSFKYT-GQPQSCLRCSEIGHGVKECTKPRRRPHRRRREELTTEQERMQC 240
Query: 457 -KETATEPP 480
+E T PP
Sbjct: 241 AQEEETLPP 249
>SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1
Query: 340 TPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATE 474
T QC +C H A+ ++ VKC+DD TTD S +E E
Sbjct: 124 TGKQCIKCSKMNHFAKMYKSKVTSVKCVDDD-TTDESTEEEDDDE 167
>SB_4194| Best HMM Match : Gal_Lectin (HMM E-Value=3.4e-18)
Length = 368
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 304 SGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTD 444
SG V P+K T +C Q + + CN +PRC +D+ T+
Sbjct: 39 SGSAV-CPHKNATNTRCVGKQAFAKIPKKCNGKPRCNVIIDETFFTE 84
>SB_34988| Best HMM Match : zf-CCHC (HMM E-Value=3e-12)
Length = 469
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Frame = +1
Query: 331 KRGTPGQCHRCQLYGHSARNCNARPRCVKCLDD-HATTDCSRV-----KETATEPPSCVL 492
KR +CH C GH A +C C H TT R+ E P C
Sbjct: 119 KRSMYIRCHNCNERGHMAVDCPDPKDCPDLWRQYHRTTQVGRIVQPTEDEDTDRPVYCYN 178
Query: 493 CRKQG 507
C K+G
Sbjct: 179 CAKEG 183
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +1
Query: 283 SPHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNC----NARPRCVKCLD-DHATTDC 447
SP SG T + RG+ G CH+C GH AR C C KC + H + +C
Sbjct: 362 SPFGYGSSGTTGRSD--RGS-GTCHKCGEVGHFARECPTGRGQSDTCHKCGETGHYSREC 418
Query: 448 SRVKETATEP 477
+ +P
Sbjct: 419 PTLGNGGLDP 428
>SB_29559| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 858
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCV--KCLDDHATTDCSRVK 459
P R+ + G ++ Y G P C RC GH ++C R + DD+ T+ S +
Sbjct: 210 PARLTVQGYSLGFRYT-GQPPSCVRCSQIGHYVKDCTRLRRRTHRRRRDDNNDTESSEER 268
Query: 460 ETATE 474
T E
Sbjct: 269 PTDRE 273
>SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038)
Length = 447
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Frame = +1
Query: 325 PYKRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLDDHATTDCSRVK------ETATEP 477
P +R P + +R + +SA R RC CL +H +CS+VK +
Sbjct: 20 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVKLPKDRINILRKF 79
Query: 478 PSCVLCRKQGPR 513
C +C K+G R
Sbjct: 80 GRCFICLKKGHR 91
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +1
Query: 346 GQCHRCQLYGHSARNCNARPRCVKCLDDHATTDC---SRVKETATEPPS 483
G+C C GH + C + C C H + C RV E T S
Sbjct: 80 GRCFICLKKGHRSNECFNKDGCSDCRGRHHVSICYERERVNENVTNGAS 128
>SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 668
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Frame = +1
Query: 325 PYKRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLDDHATTDCSRVK------ETATEP 477
P +R P + +R + +SA R RC CL +H +CS+VK +
Sbjct: 296 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVKLPKDRINILRKF 355
Query: 478 PSCVLCRKQGPR 513
C +C K+G R
Sbjct: 356 GRCFICLKKGHR 367
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +1
Query: 346 GQCHRCQLYGHSARNCNARPRCVKCLDDHATTDC---SRVKETATEPPS 483
G+C C GH + C + C C H + C RV E T S
Sbjct: 356 GRCFICLKKGHRSNECFNKDGCSDCRGRHHVSICYERERVNENVTNGAS 404
>SB_41986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 456
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 660 SPTRKTVGQPEPVRKPVSARGAPKSLG 580
S T++T+G PE +RKP G ++LG
Sbjct: 323 SETQRTLGDPENLRKPREPSGTQRTLG 349
>SB_23731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1133
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Frame = +1
Query: 262 GQENCLMSPHRVRL--SGVTVEAPYKRG-----TPGQCHRCQLYGHSARNCNARPRCVK- 417
GQ+ CL+ R RL P+K C C GH A +C + RC+K
Sbjct: 152 GQDRCLVCEDRHRLVYCDSFKSKPFKERRKIVYNKRLCRNCLKEGHFADSCPSSGRCLKE 211
Query: 418 -C-LDDHATTDCSRVKETATE 474
C L H RV E+ +E
Sbjct: 212 GCGLKHHTLLHSERVDESKSE 232
>SB_7525| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-08)
Length = 256
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLD-DHATTDCSRVKET 465
C C +GH+ R C C KC + H + DC + ET
Sbjct: 109 CMECSDFGHTRRKC-PNIECRKCKERGHISFDCPKHDET 146
>SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 468
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 447
C C GH CN R C KC H T+ C
Sbjct: 112 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 142
>SB_53919| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 289
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 447
C C GH CN R C KC H T+ C
Sbjct: 175 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 205
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 447
C C GH CN R C KC H T+ C
Sbjct: 337 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 367
>SB_38788| Best HMM Match : rve (HMM E-Value=4e-06)
Length = 956
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 349 QCHRCQLYGHSARNCNARPRCVKCLDDH 432
QCH CQ GH A C + + V +DDH
Sbjct: 201 QCHNCQKIGHFATVCQSAKQ-VHEVDDH 227
>SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 449
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDHATTDC 447
C C GH CN R C KC H T+ C
Sbjct: 112 CFNCGRTGHRENKCNGR-GCYKCKARHHTSLC 142
>SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 325 PYKRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLDDHATTDCSRVK 459
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 89 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVK 136
>SB_48337| Best HMM Match : zf-CCHC (HMM E-Value=9.3)
Length = 146
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 325 PYKRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLDDHATTDCSRVK 459
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 89 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVK 136
>SB_46068| Best HMM Match : zf-CCHC (HMM E-Value=0.0034)
Length = 193
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +1
Query: 346 GQCHRCQLY--GHSARNCNARPRCVKCLDDHAT 438
G C C L GH + +C P C KC H T
Sbjct: 99 GYCFNCGLEKPGHGSSSCPDLPACTKCPGRHLT 131
>SB_35030| Best HMM Match : Peptidase_A16_N (HMM E-Value=4.3e-05)
Length = 353
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 325 PYKRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLDDHATTDCSRVK 459
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 296 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVK 343
>SB_34577| Best HMM Match : zf-CCHC (HMM E-Value=9.3)
Length = 146
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 325 PYKRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLDDHATTDCSRVK 459
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 89 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVK 136
>SB_17795| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 272
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 325 PYKRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLDDHATTDCSRVK 459
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 215 PDERPAPQEQNRGKQGPNSASALTTAGTRKRCAFCLGEHQEDECSKVK 262
>SB_208| Best HMM Match : zf-C2H2 (HMM E-Value=1.7)
Length = 836
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 245 CYEHHIVREFXAPAVHPVHTYDG 177
CY HH +RE PA+HPV +G
Sbjct: 799 CYTHHDIRE-NRPAIHPVLQENG 820
>SB_55909| Best HMM Match : Sushi (HMM E-Value=2.3e-31)
Length = 526
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Frame = +1
Query: 328 YKRGTPGQCHRCQLYGH----SARNCNARP 405
Y GTPGQC++C+ + S +CNA P
Sbjct: 272 YGPGTPGQCYKCRKGSYKKFPSPEDCNACP 301
>SB_52621| Best HMM Match : Peptidase_A16_N (HMM E-Value=2.4e-05)
Length = 332
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 325 PYKRGTPGQCHRCQLYGHSAR---NCNARPRCVKCLDDHATTDCSRVK 459
P +R P + +R + +SA R RC CL +H +CS+VK
Sbjct: 275 PDERPAPQEQNRGKQGPNSASALATAGTRKRCAFCLGEHQEDECSKVK 322
>SB_29912| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00036)
Length = 618
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKC 420
P +R+ ++ Y G P Q C H +C R RC KC
Sbjct: 59 PRNLRVRSFPIKLWYP-GQPTQFAYCHQMAHLISSCPVRGRCFKC 102
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +1
Query: 352 CHRCQLYGHSARNC-NARP---RCVKCLDD-HATTDC 447
CH+C GH AR C NA +C KC + H +C
Sbjct: 466 CHKCNEEGHFARECPNADSGGNKCFKCNESGHFAREC 502
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 132 LDVEQIKNDLVGQSYPVISVHRMHSGRXKFAYDMVLVALEAHRRAR 269
LD+E LV Q + + + H +H G + + V L H+R +
Sbjct: 688 LDIEGCMGTLVDQEWIMTTAHCLHVGAYQLQPQFIKVELGVHKRGQ 733
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/94 (28%), Positives = 44/94 (46%)
Frame = +3
Query: 3 ARGNIRRP*VLTAYLRKERIGYHTYALQEERELRVVIRGVPKELDVEQIKNDLVGQSYPV 182
A + P ++T L E + T AL E R P L +++I+N +VGQ
Sbjct: 167 AESVVALPILITPNLAHEDLFVLTKALVARLESSS--RPEPMVLSLDRIRN-VVGQDRFD 223
Query: 183 ISVHRMHSGRXKFAYDMVLVALEAHRRARKLPHV 284
+HR+ S + KF +D V A R+ ++P +
Sbjct: 224 DYIHRLPSQQQKFCFDAVQQYGTAIDRSIEMPEL 257
>SB_31317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 316 VEAPYKRGTPGQCHRCQLYGHSARNCNAR 402
VEA RG P HRC + A+ C AR
Sbjct: 628 VEADSSRGRPPSVHRCHIRKGGAQWCKAR 656
>SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKC 420
C+RC H AR+C A +C C
Sbjct: 3 CYRCHDPSHFARDCRAPIQCATC 25
>SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2306
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 331 KRGTPGQCHRCQLYGHSARN--CNARPR-CVKC 420
++G C+RC + GH +++ C AR R C KC
Sbjct: 1521 EKGKGKHCYRCGMEGHFSKDPECKARGRMCNKC 1553
>SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029)
Length = 846
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLD 426
C+RC H AR+C A +C C D
Sbjct: 136 CYRCLDPSHFARDCRAPIQCATCGD 160
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 326 PTNAALPGSATVANSMATPRVTATRDRVA 412
P A+PG+ V+ ++ATP TA + A
Sbjct: 48 PGTTAVPGTTAVSETVATPETTAAPETTA 76
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 326 PTNAALPGSATVANSMATPRVTATRDRVA 412
P A+PG+ V+ ++ATP TA + A
Sbjct: 1980 PGTTAVPGTTAVSETVATPETTAAPETTA 2008
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 326 PTNAALPGSATVANSMATPRVTATRDRVA 412
P A+PG+ V+ ++ATP TA + A
Sbjct: 3135 PGTTAVPGTTAVSETVATPETTAAPETTA 3163
>SB_48624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 813
Score = 27.9 bits (59), Expect = 7.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 331 KRGTPGQCHRCQLYGHSARNC 393
+R +CH C +GH+ R+C
Sbjct: 78 RRNKGPRCHHCHKFGHTKRDC 98
>SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018)
Length = 1066
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 346 GQCHRCQLYGHSARNCNARPRCVKCLDDHAT 438
G C C H AR+C + C C HAT
Sbjct: 598 GICFACLKPRHLARDCKEKRECSICKKRHAT 628
>SB_29933| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 420
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Frame = +1
Query: 313 TVEAPYKRGTPGQCH--RCQLYGHSARNCNARP----RCVKCLDDHATTDCSRVKETATE 474
T + PYK G+C + QL H + +P CV+C + + T +
Sbjct: 319 TGQKPYKCDVCGKCFTLKAQLKKHLMIHSRQKPYECDECVECFSESGNLKRHLMIHTGQK 378
Query: 475 PPSCVLCRK 501
P C +C K
Sbjct: 379 PYKCDVCGK 387
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,375,208
Number of Sequences: 59808
Number of extensions: 474585
Number of successful extensions: 1741
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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