Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0244
(662 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 39 2e-04
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 38 2e-04
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 36 0.002
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 36 0.002
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 33 0.008
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 33 0.011
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 32 0.014
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 32 0.019
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 31 0.025
AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 31 0.032
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 31 0.043
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 30 0.075
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 27 0.53
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 26 1.2
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 26 1.2
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 26 1.2
AY907825-1|AAX92637.1| 67|Anopheles gambiae antimicrobial pept... 25 2.8
AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 25 2.8
AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein. 24 4.9
AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein. 24 4.9
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 24 4.9
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 6.5
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 23 8.6
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 8.6
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 38.7 bits (86), Expect = 2e-04
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDHAT--TDCSR 453
C RC + GH A+ C ++P+C+KC H DC+R
Sbjct: 685 CIRCGVVGHMAKVCTSQPKCLKCGGPHTIGHPDCAR 720
Score = 25.8 bits (54), Expect = 1.2
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +1
Query: 349 QCHRCQLYGHSARNCNA----RPRCVKC-LDDHATTDCSRVKETATEPPSCVLCRKQGPR 513
+C+RC GH A +C + + C++C + H C T P C+ C GP
Sbjct: 661 RCYRCLELGHWAHDCRSPDDRQNMCIRCGVVGHMAKVC-------TSQPKCLKC--GGPH 711
Query: 514 PTTVDAPRLHGSARQ 558
T+ P SA Q
Sbjct: 712 --TIGHPDCARSALQ 724
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 38.3 bits (85), Expect = 2e-04
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +1
Query: 349 QCHRCQLYGHSARNCNARPR---CVKCLDDHATTDCSRVKE 462
QC+RC YGH+A C+ + R C +C +D C+R ++
Sbjct: 213 QCYRCYEYGHTAARCHGKDRSSKCHRCAEDKHEGPCTRERK 253
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 35.5 bits (78), Expect = 0.002
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDH--ATTDCSRVKETATEP 477
C RC L GH AR+C +C C H ++C+R + + P
Sbjct: 531 CIRCGLTGHKARSCQNEAKCALCGGAHHIGHSECARSAQRCSRP 574
Score = 27.5 bits (58), Expect = 0.40
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Frame = +1
Query: 349 QCHRCQLYGHSARNCNA----RPRCVKC-LDDHATTDCSRVKETA 468
+C RC GH A NC + + C++C L H C + A
Sbjct: 507 RCFRCLEMGHIASNCRSTADRQNLCIRCGLTGHKARSCQNEAKCA 551
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 35.5 bits (78), Expect = 0.002
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDHAT--TDCSR 453
C RC GH A++CNA +C C H +DC R
Sbjct: 387 CIRCGAEGHLAKDCNAEVKCAVCSGPHRVGHSDCVR 422
Score = 31.9 bits (69), Expect = 0.019
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +1
Query: 319 EAPYKRGTPGQCHRCQLYGHSARNCNA----RPRCVKC-LDDHATTDCS 450
EAP +C+RC GH AR C + + C++C + H DC+
Sbjct: 353 EAPAINLQQQRCYRCLERGHIARECRSPVDRQKACIRCGAEGHLAKDCN 401
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 33.1 bits (72), Expect = 0.008
Identities = 19/59 (32%), Positives = 23/59 (38%)
Frame = +1
Query: 319 EAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATEPPSCVLC 495
EAP G +C RC GH A C R +CL D + T C+LC
Sbjct: 455 EAPKVSGQLTRCFRCLERGHIAATCTGEDRSKRCL---RCGDQTHKASGCTNEVKCMLC 510
Score = 23.4 bits (48), Expect = 6.5
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +1
Query: 349 QCHRCQLYGHSARNCNARPRCVKCLDDH 432
+C RC H A C +C+ C H
Sbjct: 487 RCLRCGDQTHKASGCTNEVKCMLCGGAH 514
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 32.7 bits (71), Expect = 0.011
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +1
Query: 322 APYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRK 501
AP ++ + +C RC GH+ +C R CL H R + T P C++C
Sbjct: 281 APKQQQSAVRCFRCLERGHTTADCAGEDRSSLCL--HCGAADHRA-ASCTSDPKCIVC-- 335
Query: 502 QGPRPTTVDAPRLHGSARQ 558
GP + AP G Q
Sbjct: 336 GGPH--RIAAPMCKGPPSQ 352
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 32.3 bits (70), Expect = 0.014
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 346 GQCHRCQLYGHSARNCNARPRCVKCLDDHATTDC--SRVKETATEP 477
G C C GHSAR C + C +C H + C R+ E P
Sbjct: 375 GLCFNCLRKGHSARECRSTYVCQQCKRKHHSKLCKIGRLSEVEVVP 420
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 31.9 bits (69), Expect = 0.019
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDH 432
C RC GH A C A RC C H
Sbjct: 429 CIRCGTSGHLAATCEAEVRCASCAGPH 455
Score = 27.5 bits (58), Expect = 0.40
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = +1
Query: 319 EAPYKRGTPGQCHRCQLYGHSARNC----NARPRCVKC-LDDHATTDC 447
EAP+ +C+RC GH +R+C N C++C H C
Sbjct: 395 EAPHTPIEKLRCYRCLERGHVSRDCHSPVNHSNVCIRCGTSGHLAATC 442
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 31.5 bits (68), Expect = 0.025
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +1
Query: 349 QCHRCQLYGHSARNCNA----RPRCVKC-LDDHATTDC-SRVKETATEPP 480
+C+RC GH AR+C + + C++C D H C S +K A P
Sbjct: 389 RCYRCLERGHLARDCQSPVDRQQACIRCGADGHYAKSCTSEIKCAACNGP 438
Score = 29.1 bits (62), Expect = 0.13
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDH 432
C RC GH A++C + +C C H
Sbjct: 413 CIRCGADGHYAKSCTSEIKCAACNGPH 439
>AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein
protein.
Length = 298
Score = 31.1 bits (67), Expect = 0.032
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +1
Query: 319 EAPYKRGTPGQCHRCQLYGHSARNCNARPR---CVKC-LDDHATTDCSRVKETATEPPSC 486
EAP +C RC GH R C R C++C +H +C T C
Sbjct: 225 EAPKPSAESRRCFRCLERGHMVRECQGTNRSSLCIRCGAANHKAVNC-------TNDVKC 277
Query: 487 VLC 495
+LC
Sbjct: 278 LLC 280
Score = 26.2 bits (55), Expect = 0.92
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDH--ATTDCS 450
C RC H A NC +C+ C H A C+
Sbjct: 258 CIRCGAANHKAVNCTNDVKCLLCGGPHRIAAASCA 292
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 30.7 bits (66), Expect = 0.043
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDH 432
C RC GH AR+C++ +C C H
Sbjct: 500 CIRCGSEGHKARDCSSYVKCAACGGPH 526
Score = 29.9 bits (64), Expect = 0.075
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 298 RLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCNA----RPRCVKC-LDDHATTDCS 450
++ GV AP ++ +C+RC GH A C + + C++C + H DCS
Sbjct: 463 KIRGVEKAAPERQ----RCYRCLERGHLAHACRSSTDRQQLCIRCGSEGHKARDCS 514
Score = 23.0 bits (47), Expect = 8.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 102 GVHAPPGAHRYDTLCVPCGGTRSRPM 25
GV+ PPG+HR L P T ++ M
Sbjct: 7 GVNRPPGSHRPPGLSNPPTCTSAKMM 32
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 29.9 bits (64), Expect = 0.075
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDHATTD--CSR 453
C RC GH A C RC KC H D C R
Sbjct: 574 CIRCGQEGHKAGTCMEEIRCGKCDGPHVIGDRTCDR 609
Score = 28.7 bits (61), Expect = 0.17
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +1
Query: 349 QCHRCQLYGHSARNCNA----RPRCVKC-LDDHATTDC 447
+C+RC +GH+AR+C + + C++C + H C
Sbjct: 550 RCYRCLEHGHNARDCRSPVDRQNVCIRCGQEGHKAGTC 587
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 27.1 bits (57), Expect = 0.53
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLD 426
C R GH A C PRCV C D
Sbjct: 453 CLRGGEKGHFAATCRLPPRCVLCPD 477
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 25.8 bits (54), Expect = 1.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 352 CHRCQLYGHSARNC 393
CHRC+ GH R+C
Sbjct: 204 CHRCRKPGHMKRDC 217
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 25.8 bits (54), Expect = 1.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDD 429
C +C GH R C C+ C +D
Sbjct: 352 CIKCGQEGHKIRECPNAMTCLDCRED 377
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 25.8 bits (54), Expect = 1.2
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKC 420
C +C L GH + C +C+ C
Sbjct: 299 CWKCGLSGHKKQACTNSVKCLDC 321
Score = 25.4 bits (53), Expect = 1.6
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = +1
Query: 349 QCHRCQLYGHSARNCNARPR---CVKC-LDDHATTDCS 450
+C++C GH++ +C R C KC L H C+
Sbjct: 276 KCYKCWKVGHTSYHCREPDRSNLCWKCGLSGHKKQACT 313
>AY907825-1|AAX92637.1| 67|Anopheles gambiae antimicrobial peptide
defensin 3 protein.
Length = 67
Score = 24.6 bits (51), Expect = 2.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 361 CQLYGHSARNCNARPRCV 414
C + G A +CNA+ CV
Sbjct: 46 CHMSGRGAGSCNAKDECV 63
>AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin
GPCR protein.
Length = 634
Score = 24.6 bits (51), Expect = 2.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 602 AGRRSLWASGFRGRVCRALPWSL 534
A R + +R VC ALPW L
Sbjct: 610 ARRSGTYPRYYRDAVCNALPWDL 632
>AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein.
Length = 112
Score = 23.8 bits (49), Expect = 4.9
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +2
Query: 269 KIASCLRTVC---AYRGSP*RPPTNAALPGSATVANSMATPRVTAT 397
K+ L TVC A PPT P + TVA + T T T
Sbjct: 3 KVVVGLVTVCVLLAVTSGQIDPPTTTVAPATTTVAPTTTTVAPTTT 48
>AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein.
Length = 122
Score = 23.8 bits (49), Expect = 4.9
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +2
Query: 269 KIASCLRTVC---AYRGSP*RPPTNAALPGSATVANSMATPRVTAT 397
K+ L TVC A PPT P + TVA + T T T
Sbjct: 3 KVVVGLVTVCVLLAVTSGQIDPPTTTVAPATTTVAPTTTTVAPTTT 48
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 23.8 bits (49), Expect = 4.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 439 WSRDRLSTSRNAVARCSYARSGHRVGNGGT 350
W R ++ +AV S+AR G +GN GT
Sbjct: 126 WGSKRTNSRGDAVLE-SFARLGVTLGNAGT 154
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.4 bits (48), Expect = 6.5
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +1
Query: 445 CSRVKETATEP-PSCVLCRKQGPRPTTVDAPRL 540
C ++ T P CV CRK G V A L
Sbjct: 1169 CRQISPTVNSTEPVCVKCRKSGNSHQEVPADEL 1201
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 23.0 bits (47), Expect = 8.6
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 114 VLRRGVHAPPGAHRYDTLCVPCGGTRSRPMVVGC 13
V+ R + P + T VPC SRP + C
Sbjct: 45 VMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 23.0 bits (47), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 343 PGQCHRCQLYGHSARNC 393
PG C C GH R+C
Sbjct: 73 PGACFFCGQPGHKKRDC 89
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,228
Number of Sequences: 2352
Number of extensions: 15725
Number of successful extensions: 65
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -