Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0244
(662 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 59 6e-09
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 57 2e-08
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 56 4e-08
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 56 4e-08
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 56 4e-08
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 56 4e-08
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 55 8e-08
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 55 8e-08
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 55 8e-08
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 55 8e-08
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 54 2e-07
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 54 2e-07
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 52 7e-07
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 52 7e-07
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 51 1e-06
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 45 8e-05
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 44 1e-04
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 44 1e-04
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 39 0.007
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 39 0.007
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 39 0.007
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 36 0.049
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 36 0.065
AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alph... 31 1.8
AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-P... 31 1.8
AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-P... 31 1.8
U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding pr... 30 3.2
AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p pro... 30 3.2
AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE... 30 3.2
AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD... 30 3.2
AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC... 30 3.2
AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB... 30 3.2
AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA... 30 3.2
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 29 4.3
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 29 4.3
AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p pro... 29 4.3
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 29 4.3
AY122257-1|AAM52769.1| 1608|Drosophila melanogaster SD08305p pro... 29 5.6
AE014298-473|AAN09090.1| 294|Drosophila melanogaster CG3526-PB,... 29 7.5
M97693-1|AAA29023.1| 732|Drosophila melanogaster ets DNA bindin... 28 9.9
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 28 9.9
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 58.8 bits (136), Expect = 6e-09
Identities = 26/55 (47%), Positives = 30/55 (54%)
Frame = +1
Query: 310 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATE 474
+TVE P+KR P QC CQ YGH+ C P CV C D H + C KE A E
Sbjct: 26 ITVEEPHKRNAPVQCTNCQEYGHTRSYCTLAPVCVVCGDLHDSKQCQINKENACE 80
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +1
Query: 262 GQENCLMSPHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATT 441
G + ++S ++ V +E + P QC+RCQ + H+ +C PRC+KC DH ++
Sbjct: 626 GSHDKIISLKQIGGQRVDIERKNRTREPVQCYRCQGFRHAKNSCMKPPRCMKCAGDHLSS 685
Query: 442 DCSRVKETATEPPSCVLC 495
C++ + T P +CV C
Sbjct: 686 CCTKPRST---PATCVNC 700
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 56.0 bits (129), Expect = 4e-08
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = +1
Query: 262 GQENCLMSPHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATT 441
G + ++S ++ V +E + P QC+RCQ + H+ +C PRC+KC +H ++
Sbjct: 618 GSHDKILSLKQIGGQRVDIERKNRTRDPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSS 677
Query: 442 DCSRVKETATEPPSCVLCRKQ 504
C++ + T P +CV C Q
Sbjct: 678 CCTKPR---TTPATCVNCSGQ 695
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 56.0 bits (129), Expect = 4e-08
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +1
Query: 310 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKE 462
+TVE P+KR P QC CQ YGH+ C + CV C + H T +C + K+
Sbjct: 370 ITVEEPHKRINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKNKD 420
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 56.0 bits (129), Expect = 4e-08
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = +1
Query: 262 GQENCLMSPHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATT 441
G + ++S ++ V +E + P QC+RCQ + H+ +C PRC+KC +H ++
Sbjct: 596 GSHDKILSLKQIGGQRVDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSS 655
Query: 442 DCSRVKETATEPPSCVLCRKQ 504
C++ + T P +CV C Q
Sbjct: 656 CCTKPR---TTPATCVNCSGQ 673
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 56.0 bits (129), Expect = 4e-08
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +1
Query: 310 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKE 462
+TVE P+KR P QC CQ YGH+ C + CV C + H T +C + K+
Sbjct: 214 ITVEEPHKRINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKNKD 264
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 55.2 bits (127), Expect = 8e-08
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 301 LSGVTVEAPYKRGT--PGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATE 474
L G TV+ KR + P QCHRCQ +GH+ C +C+KC HAT C++ K
Sbjct: 776 LGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL--- 832
Query: 475 PPSCVLC 495
P +C C
Sbjct: 833 PATCANC 839
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 55.2 bits (127), Expect = 8e-08
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 301 LSGVTVEAPYKRGT--PGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATE 474
L G TV+ KR + P QCHRCQ +GH+ C +C+KC HAT C++ K
Sbjct: 699 LGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL--- 755
Query: 475 PPSCVLC 495
P +C C
Sbjct: 756 PATCANC 762
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 55.2 bits (127), Expect = 8e-08
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 301 LSGVTVEAPYKRGT--PGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATE 474
L G TV+ KR + P QCHRCQ +GH+ C +C+KC HAT C++ K
Sbjct: 699 LGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL--- 755
Query: 475 PPSCVLC 495
P +C C
Sbjct: 756 PATCANC 762
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 55.2 bits (127), Expect = 8e-08
Identities = 27/67 (40%), Positives = 34/67 (50%)
Frame = +1
Query: 310 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATEPPSCV 489
V +E KR QCHRCQ GH+A+ C CVKC +H DC+R + E +C
Sbjct: 273 VVIEPLRKRNAIVQCHRCQQIGHTAKYCRKAHICVKCAGEHPAKDCTRPR---IELCTCY 329
Query: 490 LCRKQGP 510
C Q P
Sbjct: 330 NCGGQHP 336
Score = 35.1 bits (77), Expect = 0.086
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 42 YLRKERIGYHTYALQEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVH 194
+L E +H Y L+E+R RV ++G+ QIK++L + V+ +H
Sbjct: 180 WLEIEEYEFHCYQLKEDRPYRVCVKGLHHSTLHHQIKDELEKIGHKVLDIH 230
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 301 LSGVTVEAPYKRGT--PGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATE 474
L G TV+ KR + P QCHRCQ +GH+ C +C+KC HA+ C++ K
Sbjct: 776 LGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHASVSCTKPKNL--- 832
Query: 475 PPSCVLC 495
P +C C
Sbjct: 833 PATCANC 839
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +1
Query: 310 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATEPPSCV 489
V +E + P QC+RCQ + HS +C PRC+KC H ++ C++ + T P +CV
Sbjct: 649 VDIERKNRTREPVQCYRCQGFRHSKNSCMRPPRCMKCAGGHLSSCCTKPR---TTPATCV 705
Query: 490 LC 495
C
Sbjct: 706 NC 707
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 52.0 bits (119), Expect = 7e-07
Identities = 24/81 (29%), Positives = 43/81 (53%)
Frame = +1
Query: 262 GQENCLMSPHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATT 441
G + ++S ++ V +E + P QC+RCQ + H+ +C PRC+K +H ++
Sbjct: 211 GSHDKILSLKQIGGQRVDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSS 270
Query: 442 DCSRVKETATEPPSCVLCRKQ 504
C++ + T P +CV C Q
Sbjct: 271 CCTKPR---TTPATCVNCSGQ 288
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 52.0 bits (119), Expect = 7e-07
Identities = 24/81 (29%), Positives = 43/81 (53%)
Frame = +1
Query: 262 GQENCLMSPHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATT 441
G + ++S ++ V +E + P QC+RCQ + H+ +C PRC+K +H ++
Sbjct: 211 GSHDKILSLKQIGGQRVDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSS 270
Query: 442 DCSRVKETATEPPSCVLCRKQ 504
C++ + T P +CV C Q
Sbjct: 271 CCTKPR---TTPATCVNCSGQ 288
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +1
Query: 343 PGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATEPPSCVLC 495
P QCHRCQ +GH+ C +C+KC HAT C++ K P +C C
Sbjct: 2 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCANC 49
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 45.2 bits (102), Expect = 8e-05
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKC-LDDHATTDCSRV 456
P ++ +S TV+ P +C CQL GH++++C P CV C L H C+R+
Sbjct: 182 PSKLTVSWHTVKVSEYIPNPMRCKSCQLLGHTSKHCKNPPACVSCNLAPHLPVPCTRI 239
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = +1
Query: 310 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHAT 438
VTVE +R QC RCQ++GHS C P C KC H T
Sbjct: 357 VTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMT 399
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 45 LRKERIGYHTYALQEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVH 194
L K + + L+EE+ RVV++G+ + QI+ Y V++++
Sbjct: 254 LNKLNCQFWHHQLKEEKPYRVVLKGIHANVPSSQIEQAFSDHGYEVLNIY 303
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = +1
Query: 310 VTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHAT 438
VTVE +R QC RCQ++GHS C P C KC H T
Sbjct: 391 VTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMT 433
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 45 LRKERIGYHTYALQEERELRVVIRGVPKELDVEQIKNDLVGQSYPVISVH 194
L K + + L+EE+ RVV++G+ + QI+ Y V++++
Sbjct: 288 LNKLNCQFWHHQLKEEKPYRVVLKGIHANVPSSQIEQAFSDHGYEVLNIY 337
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 349 QCHRCQLYGHSARNC-NARPRCVKCLD-DHATTDCSRVKETATEPPSCVLCRKQG 507
+C++C +GH AR C RC +C H + DC T + P+C C K G
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTG 105
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 349 QCHRCQLYGHSARNC-NARPRCVKCLD-DHATTDCSRVKETATEPPSCVLCRKQG 507
+C++C +GH AR C RC +C H + DC T + P+C C K G
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTG 105
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 349 QCHRCQLYGHSARNC-NARPRCVKCLD-DHATTDCSRVKETATEPPSCVLCRKQG 507
+C++C +GH AR C RC +C H + DC T + P+C C K G
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTG 105
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 35.9 bits (79), Expect = 0.049
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKET 465
P VR+ TV P +C +C +GH C + C+ C + T D E
Sbjct: 166 PEIVRIGYETVRVRDYIPLPLRCKKCLRFGHPTPICKSVETCINCSETKHTND----GEK 221
Query: 466 ATEPPSCVLCR 498
T +C+ CR
Sbjct: 222 CTNEKNCLNCR 232
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 35.5 bits (78), Expect = 0.065
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 322 APYKRGTPGQ--CHRCQLYGHSARNCNARPRCVKCLDD 429
APY + C RC +GH A+ C A PRC+ C D
Sbjct: 419 APYCKSVDRSDCCLRCGEHGHKAKGCVAPPRCLICSSD 456
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +1
Query: 343 PGQCHRCQLYGHSARNCNARPR---CVKCLD-DHATTDCSRVKETATEPPSCVLC 495
P +C RC +GH A C + R C++C + H C PP C++C
Sbjct: 406 PIRCFRCLEFGHRAPYCKSVDRSDCCLRCGEHGHKAKGC-------VAPPRCLIC 453
>AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin
alpha1,2 protein.
Length = 3367
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +1
Query: 319 EAPYKRGTPGQCHRCQLYGHSARNCNARP-----RCVKCLDDHATTDC 447
+ PY+ G G+C CQ YGH A +C P C C ++ A +C
Sbjct: 440 DRPYQMG--GECEICQCYGH-AESCTYDPFLDKGICQSCSNNTAGIEC 484
>AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-PA,
isoform A protein.
Length = 2731
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +1
Query: 319 EAPYKRGTPGQCHRCQLYGHSARNCNARP-----RCVKCLDDHATTDC 447
+ PY+ G G+C CQ YGH A +C P C C ++ A +C
Sbjct: 440 DRPYQMG--GECEICQCYGH-AESCTYDPFLDKGICQSCSNNTAGIEC 484
>AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-PB,
isoform B protein.
Length = 3375
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +1
Query: 319 EAPYKRGTPGQCHRCQLYGHSARNCNARP-----RCVKCLDDHATTDC 447
+ PY+ G G+C CQ YGH A +C P C C ++ A +C
Sbjct: 440 DRPYQMG--GECEICQCYGH-AESCTYDPFLDKGICQSCSNNTAGIEC 484
>U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding
protein lark protein.
Length = 352
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNC 393
P +V++S V G P QC+RC GH ++ C
Sbjct: 148 PLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p
protein.
Length = 352
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNC 393
P +V++S V G P QC+RC GH ++ C
Sbjct: 148 PLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE,
isoform E protein.
Length = 352
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNC 393
P +V++S V G P QC+RC GH ++ C
Sbjct: 148 PLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD,
isoform D protein.
Length = 352
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNC 393
P +V++S V G P QC+RC GH ++ C
Sbjct: 148 PLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC,
isoform C protein.
Length = 352
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNC 393
P +V++S V G P QC+RC GH ++ C
Sbjct: 148 PLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB,
isoform B protein.
Length = 352
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNC 393
P +V++S V G P QC+RC GH ++ C
Sbjct: 148 PLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA,
isoform A protein.
Length = 352
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 286 PHRVRLSGVTVEAPYKRGTPGQCHRCQLYGHSARNC 393
P +V++S V G P QC+RC GH ++ C
Sbjct: 148 PLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +1
Query: 361 CQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATEPPSCVLC 495
C G +CN KCL + +C R K P+C C
Sbjct: 497 CNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPTCSYC 541
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A
protein.
Length = 3712
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +1
Query: 361 CQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATEPPSCVLC 495
C G +CN KCL + +C R K P+C C
Sbjct: 497 CNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPTCSYC 541
>AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p
protein.
Length = 186
Score = 29.5 bits (63), Expect = 4.3
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 349 QCHRCQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATEPPSCVLCRKQGPRPTTVD 528
+C RC GH A +C + +C T + K + C LC +G + T+ D
Sbjct: 99 RCFRCLEEGHIAAHCRSTVDRSQCCFRCGT---AGHKAECPKEAKCFLCASRGNQATSAD 155
Query: 529 -APRLHGSARQ 558
AP + AR+
Sbjct: 156 GAPDVATKARE 166
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +1
Query: 361 CQLYGHSARNCNARPRCVKCLDDHATTDCSRVKETATEPPSCVLC 495
C G +CN KCL + +C R K P+C C
Sbjct: 497 CNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPTCSYC 541
>AY122257-1|AAM52769.1| 1608|Drosophila melanogaster SD08305p protein.
Length = 1608
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 636 QPEPVRKPVSARGAPKSLGQRF*GARLPGASVEPWGIHG 520
QPEPV +P + R G R PGASV P + G
Sbjct: 1434 QPEPVHEPGAQRNHVHHDGSGAGWRRRPGASVRPSAVGG 1472
>AE014298-473|AAN09090.1| 294|Drosophila melanogaster CG3526-PB,
isoform B protein.
Length = 294
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +1
Query: 283 SPHRVRLSGVTVEAPYKRG---TPGQCH-RCQLYGHSARNCNARPRCVKCLDDHATTDC 447
+P +RLSG + P +R T G C+ RC G++ R R +C+ CLD +DC
Sbjct: 68 TPFALRLSG-SPSMPRRRQIGHTSGHCNVRCDGCGNN-RMTFYRYKCLHCLDYDLCSDC 124
>M97693-1|AAA29023.1| 732|Drosophila melanogaster ets DNA binding
domain protein protein.
Length = 732
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 509 HGQLPWMPQGSTEAPGKRAP*NRWPKDFGAPRAETGFRTGS 631
+G P MPQGS++APG A N P+ + ++ R S
Sbjct: 503 NGSSPSMPQGSSQAPGSPAGQNWNPQQQSQQQQQSPQRPAS 543
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 28.3 bits (60), Expect = 9.9
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Frame = +1
Query: 352 CHRCQLYGHSARNCNARPRCVKCLDDHAT-----TDCSRVKETATEPPSCVLCRKQGPRP 516
C C GH R+C + C C H T S ++T PP+ +Q PRP
Sbjct: 464 CLNCFARGHQLRDCTSMHSCFTCKGRHHTLLHRSPPNSENASSSTSPPT-----QQLPRP 518
Query: 517 TTVDA 531
++ +A
Sbjct: 519 SSRNA 523
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,061,618
Number of Sequences: 53049
Number of extensions: 721902
Number of successful extensions: 2106
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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