Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0243
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83840-2|CAB46206.1| 609|Homo sapiens X-ray repair complementin... 44 5e-04
S38729-1|AAB22381.1| 609|Homo sapiens Ku autoantigen p70 subuni... 44 5e-04
M32865-1|AAA36155.1| 609|Homo sapiens protein ( Human Ku protei... 44 5e-04
J04611-1|AAA51733.1| 609|Homo sapiens G22P1 protein. 44 5e-04
J04607-1|AAA61177.1| 609|Homo sapiens G22P1 protein. 44 5e-04
CR542219-1|CAG47015.1| 609|Homo sapiens G22P1 protein. 44 5e-04
CR456492-1|CAG30378.1| 227|Homo sapiens G22P1 protein. 44 5e-04
BC072449-1|AAH72449.1| 609|Homo sapiens X-ray repair complement... 44 5e-04
BC018259-1|AAH18259.1| 609|Homo sapiens X-ray repair complement... 44 5e-04
BC012154-1|AAH12154.1| 609|Homo sapiens X-ray repair complement... 44 5e-04
BC010034-1|AAH10034.1| 609|Homo sapiens X-ray repair complement... 44 5e-04
BC008343-1|AAH08343.1| 609|Homo sapiens XRCC6 protein protein. 44 5e-04
AY870329-1|AAW34364.1| 609|Homo sapiens thyroid autoantigen 70k... 44 5e-04
>Z83840-2|CAB46206.1| 609|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 6 (Ku auto
protein.
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
>S38729-1|AAB22381.1| 609|Homo sapiens Ku autoantigen p70 subunit
protein.
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
>M32865-1|AAA36155.1| 609|Homo sapiens protein ( Human Ku protein
subunit mRNA, complete cds. ).
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
>J04611-1|AAA51733.1| 609|Homo sapiens G22P1 protein.
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
>J04607-1|AAA61177.1| 609|Homo sapiens G22P1 protein.
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
>CR542219-1|CAG47015.1| 609|Homo sapiens G22P1 protein.
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
>CR456492-1|CAG30378.1| 227|Homo sapiens G22P1 protein.
Length = 227
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 76 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 135
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 136 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 195
Query: 606 VPQL 617
VP L
Sbjct: 196 VPML 199
>BC072449-1|AAH72449.1| 609|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 6 (Ku auto
protein.
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
>BC018259-1|AAH18259.1| 609|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 6 (Ku auto
protein.
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
>BC012154-1|AAH12154.1| 609|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 6 (Ku auto
protein.
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
>BC010034-1|AAH10034.1| 609|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 6 (Ku auto
protein.
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
>BC008343-1|AAH08343.1| 609|Homo sapiens XRCC6 protein protein.
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
>AY870329-1|AAW34364.1| 609|Homo sapiens thyroid autoantigen 70kDa
(Ku antigen) protein.
Length = 609
Score = 44.0 bits (99), Expect = 5e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 264 QKDMLKNIINNVKFNYTPSMFENPKLQSLYRVIEAKALKQDDIEPFVDTTKPLNKIFNEI 443
Q +K I+ ++F Y FENP LQ +R +EA AL + E VD T P + N+
Sbjct: 458 QVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKR 517
Query: 444 DG---EQFYELFGPFGVT---AVKRNSEQNQLIPNYKRLADVNIDVLDPRVKDRKVNMYT 605
G ++F EL P V + N+ + + + + + L + + +T
Sbjct: 518 LGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFT 577
Query: 606 VPQL 617
VP L
Sbjct: 578 VPML 581
Score = 39.9 bits (89), Expect = 0.008
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 EEKSIEGSTTALKAMHQACIETKTVAICVICSRINSKPNIVALSPCTRPL-GLDIDI--- 174
EE + GS+T A+ C+E + A+C R N P VAL P L I +
Sbjct: 371 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPP 430
Query: 175 GFDVIPLPFSENVRDLSSLFSDEIADT 255
GF ++ LPF+++ R + F+++I T
Sbjct: 431 GFQLVFLPFADDKRKMP--FTEKIMAT 455
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,998,417
Number of Sequences: 237096
Number of extensions: 1902296
Number of successful extensions: 3733
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3733
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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