Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0242
(695 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.45
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.45
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.45
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.45
AF264720-1|AAF75272.1| 126|Tribolium castaneum putative cytochr... 22 4.2
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 22 5.5
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 22 5.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 7.3
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 7.3
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 7.3
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 7.3
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 7.3
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 7.3
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 7.3
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 7.3
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 21 9.6
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 9.6
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 187 STATRAATPLGDRRPLDRASTWPAADPRVGVSLRERR 297
+ T A TP+ RR R T A + RV + ERR
Sbjct: 1447 ANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERR 1483
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 187 STATRAATPLGDRRPLDRASTWPAADPRVGVSLRERR 297
+ T A TP+ RR R T A + RV + ERR
Sbjct: 1447 ANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERR 1483
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 187 STATRAATPLGDRRPLDRASTWPAADPRVGVSLRERR 297
+ T A TP+ RR R T A + RV + ERR
Sbjct: 1447 ANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERR 1483
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 187 STATRAATPLGDRRPLDRASTWPAADPRVGVSLRERR 297
+ T A TP+ RR R T A + RV + ERR
Sbjct: 1447 ANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERR 1483
>AF264720-1|AAF75272.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q1 protein.
Length = 126
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 171 VLSTGGYKLSNVGYSIVHV 115
+++TGGY L +I+H+
Sbjct: 73 LITTGGYTLPKESNAIIHI 91
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.8 bits (44), Expect = 5.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 81 RAARPGRLHRVQRERYYNLHSRVYIPP 161
R R L R Q YYN SRV + P
Sbjct: 114 RGPRNSTLRRQQMSSYYN-ESRVMMSP 139
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.8 bits (44), Expect = 5.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 81 RAARPGRLHRVQRERYYNLHSRVYIPP 161
R R L R Q YYN SRV + P
Sbjct: 114 RGPRNSTLRRQQMSSYYN-ESRVMMSP 139
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 454 PSNRNALLLHGRNRRSGGTTNPCGLPRLTTS 546
PSN NA G +T+P G P +T+
Sbjct: 132 PSNSNATKSSGLTSPLSVSTSPPGKPATSTT 162
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 454 PSNRNALLLHGRNRRSGGTTNPCGLPRLTTS 546
PSN NA G +T+P G P +T+
Sbjct: 132 PSNSNATKSSGLTSPLSVSTSPPGKPATSTA 162
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 454 PSNRNALLLHGRNRRSGGTTNPCGLPRLTTS 546
PSN NA G +T+P G P +T+
Sbjct: 132 PSNSNATKSSGLTSPLSVSTSPPGKPATSTA 162
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 454 PSNRNALLLHGRNRRSGGTTNPCGLPRLTTS 546
PSN NA G +T+P G P +T+
Sbjct: 132 PSNSNATKSSGLTSPLSVSTSPPGKPATSTA 162
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 454 PSNRNALLLHGRNRRSGGTTNPCGLPRLTTS 546
PSN NA G +T+P G P +T+
Sbjct: 132 PSNSNATKSSGLTSPLSVSTSPPGKPATSTA 162
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 454 PSNRNALLLHGRNRRSGGTTNPCGLPRLTTS 546
PSN NA G +T+P G P +T+
Sbjct: 88 PSNSNATKSSGLTSPLSVSTSPPGKPATSTA 118
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 454 PSNRNALLLHGRNRRSGGTTNPCGLPRLTTS 546
PSN NA G +T+P G P +T+
Sbjct: 132 PSNSNATKSSGLTSPLSVSTSPPGKPATSTA 162
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 454 PSNRNALLLHGRNRRSGGTTNPCGLPRLTTS 546
PSN NA G +T+P G P +T+
Sbjct: 132 PSNSNATKSSGLTSPLSVSTSPPGKPATSTA 162
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 432 YTETLQLISQGGWR 391
Y E ++L +GGW+
Sbjct: 299 YNEIVELQKEGGWK 312
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -3
Query: 693 LRNRFHFCLHGKP 655
L ++++ C+HGKP
Sbjct: 487 LCDKYYRCVHGKP 499
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,442
Number of Sequences: 336
Number of extensions: 3271
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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