Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0242
(695 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S72379-1|AAB20671.1| 453|Drosophila melanogaster vestigial prot... 34 0.16
AE013599-1607|AAF58444.1| 453|Drosophila melanogaster CG3830-PA... 34 0.16
AY058279-1|AAL13508.1| 1148|Drosophila melanogaster GH03118p pro... 33 0.49
AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-P... 33 0.49
BT023900-1|ABA81834.1| 1576|Drosophila melanogaster LP13775p pro... 32 0.86
AE013599-1871|AAF58260.1| 856|Drosophila melanogaster CG13942-P... 32 0.86
BT001448-1|AAN71203.1| 306|Drosophila melanogaster GH26660p pro... 29 4.6
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro... 29 4.6
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P... 29 4.6
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P... 29 4.6
AE014134-2359|AAF53310.1| 417|Drosophila melanogaster CG16850-P... 29 6.0
>S72379-1|AAB20671.1| 453|Drosophila melanogaster vestigial
protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.16
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 94 GRAARVTHSHARTHARTYVRARTHSHTHT 8
G A HS RTHA + A TH H+HT
Sbjct: 144 GAAGHSLHSSHRTHAHSLAHAHTHPHSHT 172
Score = 33.9 bits (74), Expect = 0.21
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 76 THSHARTHARTYVRARTHSHTH 11
TH+H+ HA T+ + TH+HTH
Sbjct: 156 THAHSLAHAHTHPHSHTHTHTH 177
>AE013599-1607|AAF58444.1| 453|Drosophila melanogaster CG3830-PA
protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.16
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 94 GRAARVTHSHARTHARTYVRARTHSHTHT 8
G A HS RTHA + A TH H+HT
Sbjct: 144 GAAGHSLHSSHRTHAHSLAHAHTHPHSHT 172
Score = 33.9 bits (74), Expect = 0.21
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 76 THSHARTHARTYVRARTHSHTH 11
TH+H+ HA T+ + TH+HTH
Sbjct: 156 THAHSLAHAHTHPHSHTHTHTH 177
>AY058279-1|AAL13508.1| 1148|Drosophila melanogaster GH03118p protein.
Length = 1148
Score = 32.7 bits (71), Expect = 0.49
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -1
Query: 356 PRCNKKYLYKVGRDESVSAQRRSRRLTPTRGSAAGQVLARSRG 228
P +K +Y G + V A +SR + TRG+ AGQ+ R RG
Sbjct: 1041 PDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRG 1083
>AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-PD,
isoform D protein.
Length = 2964
Score = 32.7 bits (71), Expect = 0.49
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -1
Query: 356 PRCNKKYLYKVGRDESVSAQRRSRRLTPTRGSAAGQVLARSRG 228
P +K +Y G + V A +SR + TRG+ AGQ+ R RG
Sbjct: 2857 PDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRG 2899
>BT023900-1|ABA81834.1| 1576|Drosophila melanogaster LP13775p
protein.
Length = 1576
Score = 31.9 bits (69), Expect = 0.86
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 85 ARVTHSHARTHARTYVRARTHSHTHTRA 2
AR +HSH+ +HA ++ + HSH H +
Sbjct: 186 ARQSHSHSHSHAHSHSNSHGHSHGHAHS 213
>AE013599-1871|AAF58260.1| 856|Drosophila melanogaster CG13942-PA
protein.
Length = 856
Score = 31.9 bits (69), Expect = 0.86
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 85 ARVTHSHARTHARTYVRARTHSHTHTRA 2
AR +HSH+ +HA ++ + HSH H +
Sbjct: 124 ARQSHSHSHSHAHSHSNSHGHSHGHAHS 151
>BT001448-1|AAN71203.1| 306|Drosophila melanogaster GH26660p
protein.
Length = 306
Score = 29.5 bits (63), Expect = 4.6
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 190 TATRAATPLGDRRPLDRASTWPAADPR-VGVSLRERRCALTLSSRP 324
T AA R+P + TWPA PR V S R R+ T RP
Sbjct: 9 TGKHAARRKRLRKPQASSKTWPAPSPRTVEPSARPRKSGKTPKGRP 54
>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p
protein.
Length = 1413
Score = 29.5 bits (63), Expect = 4.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 85 ARVTHSHARTHARTYVRARTHSHTHTRA 2
A TH+HA +H+ ++ + TH H +
Sbjct: 104 ATATHTHAHSHSHSHAHSHTHPQPHAHS 131
>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
isoform A protein.
Length = 1413
Score = 29.5 bits (63), Expect = 4.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 85 ARVTHSHARTHARTYVRARTHSHTHTRA 2
A TH+HA +H+ ++ + TH H +
Sbjct: 104 ATATHTHAHSHSHSHAHSHTHPQPHAHS 131
>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
isoform B protein.
Length = 1700
Score = 29.5 bits (63), Expect = 4.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 85 ARVTHSHARTHARTYVRARTHSHTHTRA 2
A TH+HA +H+ ++ + TH H +
Sbjct: 391 ATATHTHAHSHSHSHAHSHTHPQPHAHS 418
>AE014134-2359|AAF53310.1| 417|Drosophila melanogaster CG16850-PA
protein.
Length = 417
Score = 29.1 bits (62), Expect = 6.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 73 HSHARTHARTYVRARTHSH 17
HSHA +H Y + +HSH
Sbjct: 106 HSHAHSHGHAYAHSHSHSH 124
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,947,052
Number of Sequences: 53049
Number of extensions: 644097
Number of successful extensions: 2126
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1998
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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