Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0239
(687 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 160 3e-38
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 160 3e-38
UniRef50_UPI0001553738 Cluster: PREDICTED: hypothetical protein;... 158 1e-37
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 146 6e-34
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 140 4e-32
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 121 2e-26
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 120 3e-26
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 116 4e-25
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 101 2e-20
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 97 4e-19
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 96 8e-19
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 91 3e-17
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 87 4e-16
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 87 4e-16
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 85 1e-15
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 84 3e-15
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 83 5e-15
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 81 3e-14
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 80 4e-14
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 79 8e-14
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 79 8e-14
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 79 1e-13
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 78 2e-13
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 77 4e-13
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 77 4e-13
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 77 5e-13
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 76 9e-13
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 75 1e-12
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 75 1e-12
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 75 1e-12
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 75 2e-12
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 75 2e-12
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 75 2e-12
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 74 3e-12
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 74 3e-12
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 74 4e-12
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 73 9e-12
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 73 9e-12
UniRef50_UPI0000E495C3 Cluster: PREDICTED: hypothetical protein;... 72 1e-11
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 72 1e-11
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 72 1e-11
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 72 2e-11
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 71 2e-11
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 71 3e-11
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 71 3e-11
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 71 3e-11
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 71 3e-11
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 70 5e-11
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 70 5e-11
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 69 8e-11
UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n... 69 8e-11
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 69 8e-11
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 69 1e-10
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 69 1e-10
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 69 1e-10
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 69 1e-10
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 69 1e-10
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 1e-10
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 69 1e-10
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 69 1e-10
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 69 1e-10
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 68 2e-10
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 68 2e-10
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 68 2e-10
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 68 2e-10
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 68 2e-10
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 68 2e-10
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 68 2e-10
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 67 4e-10
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 67 4e-10
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 66 6e-10
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 66 6e-10
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 66 6e-10
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 66 6e-10
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 66 6e-10
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 66 8e-10
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 66 8e-10
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 66 8e-10
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 66 8e-10
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 66 8e-10
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 66 1e-09
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 66 1e-09
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 66 1e-09
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 65 1e-09
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 65 1e-09
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 65 1e-09
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 1e-09
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 65 1e-09
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 65 2e-09
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 65 2e-09
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 65 2e-09
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 65 2e-09
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 65 2e-09
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 2e-09
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 64 2e-09
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 64 2e-09
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 64 2e-09
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 3e-09
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 64 4e-09
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 4e-09
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 64 4e-09
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 64 4e-09
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 64 4e-09
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 64 4e-09
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 64 4e-09
UniRef50_Q015D2 Cluster: DEAD/DEAH box helicase family protein /... 63 5e-09
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 63 5e-09
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 63 5e-09
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 63 7e-09
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 63 7e-09
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 63 7e-09
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 63 7e-09
UniRef50_Q7RNB9 Cluster: Helicase conserved C-terminal domain, p... 63 7e-09
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 63 7e-09
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 63 7e-09
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 63 7e-09
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 63 7e-09
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 62 9e-09
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 62 9e-09
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 62 9e-09
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 62 9e-09
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 9e-09
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 62 9e-09
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 62 9e-09
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 9e-09
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 9e-09
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 62 9e-09
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 62 9e-09
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 62 1e-08
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 1e-08
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 62 1e-08
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 1e-08
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 62 2e-08
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 2e-08
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 62 2e-08
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 62 2e-08
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 62 2e-08
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 62 2e-08
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 61 2e-08
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 61 2e-08
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 2e-08
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 61 2e-08
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 61 2e-08
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 61 2e-08
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 61 2e-08
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 61 3e-08
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 61 3e-08
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 61 3e-08
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 61 3e-08
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_Q2H6N4 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 61 3e-08
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 61 3e-08
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 60 4e-08
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 60 4e-08
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 60 4e-08
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 60 4e-08
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 60 4e-08
UniRef50_Q9N341 Cluster: Putative uncharacterized protein; n=2; ... 60 4e-08
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 60 4e-08
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 60 4e-08
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 60 4e-08
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 60 4e-08
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 60 4e-08
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 60 4e-08
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 60 4e-08
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 60 5e-08
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 5e-08
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 5e-08
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 60 5e-08
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 60 5e-08
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 60 5e-08
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 60 5e-08
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 60 5e-08
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 60 5e-08
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 60 5e-08
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 60 7e-08
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 60 7e-08
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 60 7e-08
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 7e-08
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 60 7e-08
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 60 7e-08
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 60 7e-08
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 60 7e-08
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 7e-08
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 60 7e-08
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 60 7e-08
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 60 7e-08
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 60 7e-08
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 60 7e-08
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 59 9e-08
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 59 9e-08
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 59 9e-08
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 59 9e-08
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 59 9e-08
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 59 9e-08
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 59 9e-08
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 59 9e-08
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 59 9e-08
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 59 9e-08
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 59 9e-08
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 59 1e-07
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 59 1e-07
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 59 1e-07
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 59 1e-07
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 59 1e-07
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 59 1e-07
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 59 1e-07
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 59 1e-07
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 59 1e-07
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 59 1e-07
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 59 1e-07
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 58 2e-07
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 58 2e-07
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 58 2e-07
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 58 2e-07
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 58 2e-07
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 58 2e-07
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 58 2e-07
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 58 2e-07
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 58 2e-07
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 58 2e-07
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 58 2e-07
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 58 2e-07
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 58 2e-07
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 58 2e-07
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 58 2e-07
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 2e-07
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 58 2e-07
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 2e-07
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 58 2e-07
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 58 2e-07
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 58 2e-07
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 58 2e-07
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 58 2e-07
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 58 2e-07
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 58 2e-07
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 58 2e-07
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 58 2e-07
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 58 2e-07
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 58 2e-07
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 58 3e-07
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 3e-07
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 58 3e-07
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 58 3e-07
UniRef50_A2ZD51 Cluster: Putative uncharacterized protein; n=7; ... 58 3e-07
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 58 3e-07
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 58 3e-07
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 58 3e-07
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 58 3e-07
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 58 3e-07
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 57 4e-07
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 57 4e-07
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 57 4e-07
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 57 4e-07
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 57 4e-07
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 57 4e-07
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 57 4e-07
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 57 4e-07
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 57 4e-07
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 57 5e-07
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 57 5e-07
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 57 5e-07
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 57 5e-07
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 57 5e-07
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 57 5e-07
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 57 5e-07
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 57 5e-07
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 57 5e-07
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 57 5e-07
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 57 5e-07
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 57 5e-07
UniRef50_A0E4U1 Cluster: Chromosome undetermined scaffold_79, wh... 57 5e-07
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 57 5e-07
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 57 5e-07
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 56 6e-07
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 6e-07
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 56 6e-07
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 56 6e-07
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 56 6e-07
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 56 6e-07
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 56 6e-07
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 56 6e-07
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 56 6e-07
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 56 6e-07
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 56 8e-07
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 56 8e-07
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 8e-07
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 56 8e-07
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 8e-07
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 56 8e-07
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 56 8e-07
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 8e-07
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 56 8e-07
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 56 8e-07
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 56 8e-07
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 56 8e-07
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 56 8e-07
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 56 8e-07
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 56 1e-06
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 56 1e-06
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 56 1e-06
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 56 1e-06
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 56 1e-06
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 56 1e-06
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 56 1e-06
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 56 1e-06
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 56 1e-06
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 56 1e-06
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 56 1e-06
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 56 1e-06
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 56 1e-06
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 56 1e-06
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 56 1e-06
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 55 1e-06
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 55 1e-06
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 55 1e-06
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 55 1e-06
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 55 1e-06
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 55 1e-06
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 55 1e-06
UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 55 1e-06
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 55 1e-06
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 55 1e-06
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 55 2e-06
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 55 2e-06
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 55 2e-06
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 55 2e-06
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 55 2e-06
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 55 2e-06
UniRef50_Q7QV50 Cluster: GLP_435_34658_36088; n=1; Giardia lambl... 55 2e-06
UniRef50_Q61FS8 Cluster: Putative uncharacterized protein CBG115... 55 2e-06
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 55 2e-06
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 55 2e-06
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 55 2e-06
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 55 2e-06
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 55 2e-06
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 55 2e-06
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 55 2e-06
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 55 2e-06
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 55 2e-06
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 55 2e-06
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 55 2e-06
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 2e-06
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 54 2e-06
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 54 2e-06
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 54 2e-06
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 54 2e-06
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 54 2e-06
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q4UDY7 Cluster: RNA helicase, putative; n=2; Theileria|... 54 2e-06
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 54 2e-06
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 54 2e-06
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 54 2e-06
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 54 2e-06
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 54 3e-06
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 54 3e-06
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 54 3e-06
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 54 3e-06
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 54 3e-06
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 54 3e-06
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 54 3e-06
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 54 3e-06
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 54 3e-06
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 54 3e-06
UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;... 54 3e-06
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 54 3e-06
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 54 3e-06
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 54 4e-06
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 54 4e-06
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 54 4e-06
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 54 4e-06
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 54 4e-06
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_Q00Y68 Cluster: ATP-dependent RNA helicase; n=3; Ostreo... 54 4e-06
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 54 4e-06
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 54 4e-06
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 54 4e-06
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 54 4e-06
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 54 4e-06
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 54 4e-06
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 53 6e-06
UniRef50_Q08BL1 Cluster: Zgc:153386; n=2; Danio rerio|Rep: Zgc:1... 53 6e-06
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 53 6e-06
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 53 6e-06
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 53 6e-06
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 53 6e-06
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 53 6e-06
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 53 6e-06
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 53 6e-06
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 53 6e-06
UniRef50_A2X7L1 Cluster: Putative uncharacterized protein; n=1; ... 53 6e-06
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 53 6e-06
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 53 6e-06
UniRef50_Q4Q1G8 Cluster: DEAD/DEAH box helicase, putative; n=3; ... 53 6e-06
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 53 6e-06
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 53 6e-06
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 53 6e-06
UniRef50_A2E0F8 Cluster: DEAD/DEAH box helicase family protein; ... 53 6e-06
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 53 6e-06
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 53 6e-06
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 53 6e-06
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 53 6e-06
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 53 6e-06
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 53 6e-06
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 53 6e-06
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 53 6e-06
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 53 8e-06
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 53 8e-06
UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD (Asp-... 53 8e-06
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 53 8e-06
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 53 8e-06
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 53 8e-06
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 53 8e-06
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 53 8e-06
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 53 8e-06
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 53 8e-06
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 53 8e-06
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 53 8e-06
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 53 8e-06
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 53 8e-06
UniRef50_A7AR78 Cluster: DEAD box RNA helicase, putative; n=1; B... 53 8e-06
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 53 8e-06
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 53 8e-06
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 52 1e-05
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 52 1e-05
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 52 1e-05
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 52 1e-05
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_A2FQ89 Cluster: Type III restriction enzyme, res subuni... 52 1e-05
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 52 1e-05
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 52 1e-05
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 52 1e-05
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 52 1e-05
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 52 1e-05
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 52 1e-05
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 52 1e-05
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 52 1e-05
UniRef50_A7SVK2 Cluster: Predicted protein; n=1; Nematostella ve... 52 1e-05
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 52 1e-05
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 52 1e-05
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 52 1e-05
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 52 1e-05
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 52 1e-05
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 52 1e-05
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 52 1e-05
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 52 1e-05
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 52 1e-05
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 52 2e-05
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 52 2e-05
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 52 2e-05
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 52 2e-05
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 52 2e-05
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 52 2e-05
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 52 2e-05
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 52 2e-05
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 52 2e-05
UniRef50_A2G247 Cluster: Helicase conserved C-terminal domain co... 52 2e-05
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 52 2e-05
UniRef50_Q5UQD1 Cluster: Putative ATP-dependent RNA helicase R45... 52 2e-05
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 52 2e-05
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 52 2e-05
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 51 2e-05
UniRef50_UPI00015564E6 Cluster: PREDICTED: similar to DEAD (Asp-... 51 2e-05
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 51 2e-05
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 51 2e-05
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 51 2e-05
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 51 2e-05
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 51 2e-05
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 51 2e-05
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 51 2e-05
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 51 2e-05
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 51 2e-05
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 160 bits (389), Expect = 3e-38
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
EWKL+TLCDLY+TL+I QAVIF NTRRKVDWLTE MH RDFTVSA+HGDMDQ+ER+VIMR
Sbjct: 217 EWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMR 276
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+FR+GSSRVLITTDLLARGIDVQQV
Sbjct: 277 EFRSGSSRVLITTDLLARGIDVQQV 301
Score = 93.9 bits (223), Expect = 3e-18
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = +1
Query: 85 FKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELENGS 264
F+ LS ++QV+LLSATMP +VLEV++ FMRDPVRILV+KEELTLEGIKQFYI +E E
Sbjct: 160 FQKLSTNIQVVLLSATMPAEVLEVTKKFMRDPVRILVKKEELTLEGIKQFYINVERE--E 217
Query: 265 WKLCVTCMIH 294
WKL C ++
Sbjct: 218 WKLDTLCDLY 227
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +2
Query: 509 SCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTGS*QESTGRDIEDFYHTSIVEMP 685
S VINYDLP+NRENY NFVT + RDIE FY+T++ EMP
Sbjct: 302 SLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEE-DKRVLRDIETFYNTTVEEMP 359
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 160 bits (389), Expect = 3e-38
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
EWKL+TLCDLY+TL+I QAVIF NTRRKVDWLTE MH RDFTVSA+HGDMDQ+ER+VIMR
Sbjct: 258 EWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMR 317
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+FR+GSSRVLITTDLLARGIDVQQV
Sbjct: 318 EFRSGSSRVLITTDLLARGIDVQQV 342
Score = 137 bits (331), Expect = 3e-31
Identities = 65/94 (69%), Positives = 80/94 (85%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
IK+FVLDEADEMLSRGFKDQI+++F+ L+ +QV+LLSATMP DVLEV++ FMRDP+RIL
Sbjct: 177 IKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRIL 236
Query: 193 VQKEELTLEGIKQFYIAIELENGSWKLCVTCMIH 294
V+KEELTLEGIKQFYI +E E WKL C ++
Sbjct: 237 VKKEELTLEGIKQFYINVERE--EWKLDTLCDLY 268
Score = 50.0 bits (114), Expect = 5e-05
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +2
Query: 509 SCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTGS*QESTGRDIEDFYHTSIVEMP 685
S VINYDLP+NRENY NFVT + RDIE FY+T++ EMP
Sbjct: 343 SLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEE-DKRILRDIETFYNTTVEEMP 400
>UniRef50_UPI0001553738 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 490
Score = 158 bits (384), Expect = 1e-37
Identities = 72/85 (84%), Positives = 80/85 (94%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
EWKL+TLCDLY+TL+I QAVIF NTRRKVDWLTE MH RDFTVSA+HGDMDQ+ER+VIMR
Sbjct: 350 EWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMR 409
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+FR+GSSRVLITTDLLA GIDVQQV
Sbjct: 410 EFRSGSSRVLITTDLLAHGIDVQQV 434
Score = 41.9 bits (94), Expect = 0.014
Identities = 27/59 (45%), Positives = 31/59 (52%)
Frame = +2
Query: 509 SCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTGS*QESTGRDIEDFYHTSIVEMP 685
S VINYDLP+NRENY NFVT + RDIE FY+T + EMP
Sbjct: 435 SLVINYDLPTNRENY---------IHRKGVAINFVTEE-DKRILRDIETFYNTPVEEMP 483
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 146 bits (353), Expect = 6e-34
Identities = 65/86 (75%), Positives = 80/86 (93%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
+EWKL TLCDLY+TL+I QAVIF NTRRKVDWLTE++ +DFTVSAMHGDM+Q+ R+++M
Sbjct: 113 QEWKLPTLCDLYETLTITQAVIFVNTRRKVDWLTENLLGKDFTVSAMHGDMEQKTRDLVM 172
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
++FR+GSSR+LITTDLLARGIDVQQV
Sbjct: 173 KEFRSGSSRILITTDLLARGIDVQQV 198
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 509 SCVINYDLPSNRENY 553
S VINYDLP+NRENY
Sbjct: 199 SLVINYDLPANRENY 213
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 140 bits (338), Expect = 4e-32
Identities = 62/85 (72%), Positives = 75/85 (88%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
EWK +TLCDLYDTL+I QAVIFCNT+RKVDWLTE M +FTVS+MHGDM Q+ERE IM+
Sbjct: 262 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 321
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+FR+G+SRVLI+TD+ ARG+DV QV
Sbjct: 322 EFRSGASRVLISTDVWARGLDVPQV 346
Score = 116 bits (280), Expect = 4e-25
Identities = 52/94 (55%), Positives = 75/94 (79%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
IK+ VLDEADEML++GFK+QI+DV++ L QV+L+SAT+P ++LE++ FM DP+RIL
Sbjct: 181 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL 240
Query: 193 VQKEELTLEGIKQFYIAIELENGSWKLCVTCMIH 294
V+++ELTLEGIKQF++A+E E WK C ++
Sbjct: 241 VKRDELTLEGIKQFFVAVERE--EWKFDTLCDLY 272
Score = 40.7 bits (91), Expect = 0.033
Identities = 24/59 (40%), Positives = 27/59 (45%)
Frame = +2
Query: 509 SCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTGS*QESTGRDIEDFYHTSIVEMP 685
S +INYDLP+NRE Y NFV RDIE +Y T I EMP
Sbjct: 347 SLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKND-DIRILRDIEQYYSTQIDEMP 404
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 121 bits (291), Expect = 2e-26
Identities = 55/85 (64%), Positives = 69/85 (81%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E KLE+LC LY TL+I QAVIF NTR+K +WLT+ + +DFTVS +H +M Q ER+ M+
Sbjct: 208 EKKLESLCGLYSTLTITQAVIFVNTRKKAEWLTQELMSKDFTVSVLHSEMGQSERDTTMK 267
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+FR+GSSRV ITTDLL+RGIDVQQV
Sbjct: 268 EFRSGSSRVFITTDLLSRGIDVQQV 292
Score = 114 bits (274), Expect = 2e-24
Identities = 53/84 (63%), Positives = 67/84 (79%)
Frame = +1
Query: 4 ANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 183
A I+L VLDEAD+ML GFKDQIH++F L +VQ ILLSATMP VLE ++ FM+DPV
Sbjct: 124 AKAIRLLVLDEADQMLGNGFKDQIHEIFCKLPTNVQAILLSATMPAHVLEATKMFMQDPV 183
Query: 184 RILVQKEELTLEGIKQFYIAIELE 255
+IL+++EELT+EGI+QFYI E E
Sbjct: 184 KILIKREELTMEGIQQFYIKTETE 207
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 120 bits (289), Expect = 3e-26
Identities = 51/85 (60%), Positives = 73/85 (85%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
EWK +TL +LY+ + IAQA+I+CNT+++VD L + + ++ TVSAMHG+MDQ+ R++IM+
Sbjct: 325 EWKFDTLVELYNNIEIAQAIIYCNTKKRVDELRDKLIEKNMTVSAMHGEMDQQNRDLIMK 384
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+FRTG+SRVLITTDLL+RGID+ QV
Sbjct: 385 EFRTGTSRVLITTDLLSRGIDIHQV 409
Score = 112 bits (270), Expect = 7e-24
Identities = 52/86 (60%), Positives = 69/86 (80%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+KLF+LDEADEML RGFKDQI+ +F+ L D+QV L SATM ++LE+++ FMRDP IL
Sbjct: 244 LKLFILDEADEMLGRGFKDQINKIFQNLPHDIQVALFSATMAPEILEITKQFMRDPATIL 303
Query: 193 VQKEELTLEGIKQFYIAIELENGSWK 270
V+ ++LTL+GIKQFYIA++ E WK
Sbjct: 304 VKNDDLTLDGIKQFYIALDKE--EWK 327
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +2
Query: 515 VINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTGS*QESTGRDIEDFYHTSIVEMP 685
VINYDLP +E+Y NFV + ++ E +Y T IVEMP
Sbjct: 412 VINYDLPLKKESYIHRIGRSGRFGRKGVAINFVVPA-DAKFLKETEKYYQTQIVEMP 467
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 116 bits (280), Expect = 4e-25
Identities = 52/94 (55%), Positives = 75/94 (79%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
IK+ VLDEADEML++GFK+QI+DV++ L QV+L+SAT+P ++LE++ FM DP+RIL
Sbjct: 160 IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL 219
Query: 193 VQKEELTLEGIKQFYIAIELENGSWKLCVTCMIH 294
V+++ELTLEGIKQF++A+E E WK C ++
Sbjct: 220 VKRDELTLEGIKQFFVAVERE--EWKFDTLCDLY 251
Score = 103 bits (248), Expect = 3e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
EWK +TLCDLYDTL+I QAVIFCNT+RKVDWLTE M +FTVS+MHGDM Q+ERE IM
Sbjct: 241 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIM 299
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 101 bits (242), Expect = 2e-20
Identities = 46/93 (49%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 ANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD-P 180
A ++L V+DEAD+ML +GF D ++ KM+ D+Q+ L SAT P +++E+S+ F+RD
Sbjct: 196 ATFMRLLVVDEADQMLDQGFSDNFAEILKMVPGDIQIALFSATFPQEIIELSKQFLRDGT 255
Query: 181 VRILVQKEELTLEGIKQFYIAIELENGSWKLCV 279
+ILV+KE+LTLEGI+QFYIAI+ E+ +K+ V
Sbjct: 256 AKILVKKEQLTLEGIRQFYIAIQQEDQKFKVLV 288
Score = 93.9 bits (223), Expect = 3e-18
Identities = 37/83 (44%), Positives = 64/83 (77%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L +LY L+++Q+++FCN+++ VD L + + FTVS +H M+Q+ERE +M++F
Sbjct: 283 KFKVLVELYKNLTVSQSILFCNSKKTVDDLYDKLTAEGFTVSKIHSQMEQKEREQVMQEF 342
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G++R+L++TDL+ RGIDVQQ+
Sbjct: 343 KKGAARILVSTDLMGRGIDVQQL 365
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 97.1 bits (231), Expect = 4e-19
Identities = 44/83 (53%), Positives = 63/83 (75%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L D+Y ++SI +A+IF N++ VD+++E + F V+ +H +DQ ER+ IMR F
Sbjct: 321 KFDCLLDIYGSVSIQKAIIFANSKNAVDYISEQLQQHGFGVAPIHAGLDQLERDRIMRDF 380
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
RTG++RVLI+TDLLARGIDVQQV
Sbjct: 381 RTGTARVLISTDLLARGIDVQQV 403
Score = 91.9 bits (218), Expect = 1e-17
Identities = 39/78 (50%), Positives = 57/78 (73%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
K+ VLDEAD+MLS F +Q++D+ + DVQ++L SAT+ + + FM DP RIL+
Sbjct: 239 KMAVLDEADQMLSDNFIEQVNDIMEYFPEDVQILLFSATISQSIFHIMNTFMNDPFRILI 298
Query: 196 QKEELTLEGIKQFYIAIE 249
+KE+LTLEGIKQFY+ ++
Sbjct: 299 KKEQLTLEGIKQFYVDVQ 316
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 95.9 bits (228), Expect = 8e-19
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
+WK ETLCDLY+ SI Q+VIFC T++K +WL M +FTV +H M Q++R IMR
Sbjct: 246 DWKFETLCDLYEIASITQSVIFCQTKQKCEWLVNKMLESNFTVVQIHEGMSQQQRNEIMR 305
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
++ G RVLI TD+L R +D++ V
Sbjct: 306 DYKQGIKRVLIGTDILRRCLDIEYV 330
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/94 (38%), Positives = 60/94 (63%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K+ +LDEADEML K ++ +FK L Q +L++AT+ D+L+ F +P+ I+
Sbjct: 165 LKMIILDEADEMLIDESKSLVYCIFKYLPPKPQYVLVTATLSQDILDFIEKFFNNPLVIM 224
Query: 193 VQKEELTLEGIKQFYIAIELENGSWKLCVTCMIH 294
++ ELTLEGI+QF+I ++ E+ WK C ++
Sbjct: 225 DKRNELTLEGIQQFFIQVDKED--WKFETLCDLY 256
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 90.6 bits (215), Expect = 3e-17
Identities = 43/86 (50%), Positives = 63/86 (73%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KL+ LC L+DT+ I +++IF NTR LTE + + +TVSA+HG + QR R+ +++F
Sbjct: 272 KLDKLCGLFDTMEITRSIIFVNTRHHAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEF 331
Query: 441 RTGSSRVLITTDLLARGIDVQQVPAS 518
++GSSR+LITTDL RGIDV + PA+
Sbjct: 332 QSGSSRILITTDL--RGIDVLRAPAA 355
Score = 78.6 bits (185), Expect = 1e-13
Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I++FVLDEADE+L RGFKDQIH + + L Q SA+M + LE+ R +M PV I+
Sbjct: 189 IRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQFGFFSASMSHEALEMCRKYMNKPVEII 247
Query: 193 VQKEELTLEGI--KQFYIAIELENGSW-KLC 276
V ++E LEGI KQFY+ +E E+ KLC
Sbjct: 248 VPRDE-ELEGINVKQFYVNVEKEDCKLDKLC 277
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 87.0 bits (206), Expect = 4e-16
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
EWK +TL D+Y +++I +AVIF N+ K +WL M FTV+ +HG M +R I
Sbjct: 238 EWKFDTLIDIYQSIAIEKAVIFVNSVEKGNWLKGKMVDSGFTVALVHGQMTMDDRAKITE 297
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+FR+G +RVLI TD+ +RGIDV+ V
Sbjct: 298 EFRSGEARVLIATDVFSRGIDVRNV 322
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = +1
Query: 4 ANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 183
A ++ VLDEADEML+ FK I D+ + L Q ++++AT+ DV+E++ +R+ V
Sbjct: 156 AEKVQSVVLDEADEMLT-SFKSTIMDILQKL-PHAQKVIVTATVSADVVELATAHLRNSV 213
Query: 184 RILVQKEELTLEGIKQFYIAIELENGSWK 270
I V ++ELTL GI Q+ + +EN WK
Sbjct: 214 EIRVPRDELTLTGIDQY--VVRVENEEWK 240
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 87.0 bits (206), Expect = 4e-16
Identities = 39/94 (41%), Positives = 61/94 (64%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
H +++ +F+LDEAD+ML GF++ I D+F+ D Q IL SATMP +L+++R F RDP
Sbjct: 145 HLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDRQTILFSATMPQPILDITRRFQRDP 204
Query: 181 VRILVQKEELTLEGIKQFYIAIELENGSWKLCVT 282
+ + ++ELT+ I+Q YI + + LC T
Sbjct: 205 QFVKITRKELTVPQIEQTYIEVRERDKLEALCRT 238
Score = 86.6 bits (205), Expect = 5e-16
Identities = 42/83 (50%), Positives = 55/83 (66%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KLE LC D + A++FCNT+R VD L M R + V A+HGDM Q++R+ +M +F
Sbjct: 231 KLEALCRTLDMNNPELALVFCNTKRTVDDLMSRMQARGYFVEALHGDMKQQQRDRVMARF 290
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R+GS VLI TD+ ARGIDV V
Sbjct: 291 RSGSIDVLIATDVAARGIDVDDV 313
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
R+ K + LC++Y +++I QA+IFC TRR WLT M VS + G++ +R I+
Sbjct: 322 RKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASII 381
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
++FR G +VLITT++ ARGIDV+QV
Sbjct: 382 QRFRDGKEKVLITTNVCARGIDVKQV 407
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +1
Query: 13 IKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
I++FVLDEAD M+ ++GF D + + L ++ Q++L SAT D V + + DP I
Sbjct: 241 IRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVI 300
Query: 190 LVQKEELTLEGIKQFYIAIELENGSWK-LC 276
++KEELTL I+Q+Y+ E ++ LC
Sbjct: 301 KLRKEELTLNNIRQYYVLCEHRKDKYQALC 330
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 84.2 bits (199), Expect = 3e-15
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+ETLC + D ++IFC T+R D L + R + A+HGDM QRER+ +M F
Sbjct: 228 KIETLCRIIDAQQPPISLIFCRTKRNADELARVLTSRGYNADALHGDMSQRERDHVMHGF 287
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G++++L+ TDL ARG+D++ V
Sbjct: 288 RQGNTKILVATDLAARGLDIELV 310
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/88 (38%), Positives = 47/88 (53%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K VLDEADEML GF I + + Q L SAT+PD+V E+ FM+ P IL
Sbjct: 146 LKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTFLFSATLPDEVRELGTKFMKQPEIIL 205
Query: 193 VQKEELTLEGIKQFYIAIELENGSWKLC 276
++ E T+ I+Q+Y + LC
Sbjct: 206 IESPERTVPEIEQYYYQVNSRRKIETLC 233
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 83.4 bits (197), Expect = 5e-15
Identities = 36/87 (41%), Positives = 57/87 (65%)
Frame = +3
Query: 249 IREWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVI 428
I E KL L D+++TL + Q +IFCNT RK +W+ + +F V +HG + Q+ER I
Sbjct: 232 IEENKLLALLDIFETLLVGQVLIFCNTIRKANWIHNKLLANNFNVGLIHGRVIQKERTNI 291
Query: 429 MRQFRTGSSRVLITTDLLARGIDVQQV 509
+ FR G +R L+TTD+ +RG+++ +V
Sbjct: 292 FKNFRDGKTRALVTTDVSSRGLNIPEV 318
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/81 (44%), Positives = 61/81 (75%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I+ FVLDEAD ++++ FK I ++++ L++ VQ+I+ SAT+P L+ + F+ DPV IL
Sbjct: 153 IRTFVLDEADILMNKNFKIDIFNIYRYLNSKVQIIICSATIPLYTLQAASKFLLDPVMIL 212
Query: 193 VQKEELTLEGIKQFYIAIELE 255
++KEE+ ++ IKQFYI++ +E
Sbjct: 213 MRKEEINIDKIKQFYISVFIE 233
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/92 (41%), Positives = 56/92 (60%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+ L L +++ I Q VIFCN++ VDWL ++ + +H D+ +RE + F
Sbjct: 289 KVRVLSSLLESVPIVQGVIFCNSKHTVDWLHNALRKQKHPCERIHADLPAFDRETTVANF 348
Query: 441 RTGSSRVLITTDLLARGIDVQQVPASSTMICH 536
R G +R+LI+TDLLARG DVQQV T +C+
Sbjct: 349 RAGKTRLLISTDLLARGFDVQQV----TFVCN 376
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/86 (45%), Positives = 54/86 (62%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
R+ K + +LY L++A +VIFC+T+ V WL E+M R V +HGDM ER +
Sbjct: 848 RDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTI 907
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
F+ G +VLITT++ ARGIDV QV
Sbjct: 908 IHFKRGDFKVLITTNVFARGIDVAQV 933
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 IKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQVILLSATMPDDVLEVSRCFMRDP 180
I+ VLDEAD M+ +GF D ++ M+ S VQ +L SAT + V+ + +++
Sbjct: 764 IRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKNA 823
Query: 181 VRILVQKEELTLEGIKQFYI 240
+ +++++EE L IKQFY+
Sbjct: 824 IVVMLKREEQALPNIKQFYV 843
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 79.4 bits (187), Expect = 8e-14
Identities = 35/83 (42%), Positives = 53/83 (63%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KL++LC + D+ I ++FC T++ V LTE++ R + +HGD+ Q +R+ +MR+F
Sbjct: 230 KLDSLCRIIDSEQIDLGILFCRTKKGVAELTEALQARGYIADGLHGDLTQSQRDAVMRKF 289
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R S LI TD+ ARGIDV V
Sbjct: 290 RDSSIEFLIATDVAARGIDVGNV 312
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/92 (39%), Positives = 52/92 (56%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
H NT+ +LDEADEML GF D I + + + + Q +L SATMP + ++SR +M DP
Sbjct: 147 HVNTV---ILDEADEMLDMGFIDDIESILRQVKNERQTLLFSATMPPAIKKLSRKYMNDP 203
Query: 181 VRILVQKEELTLEGIKQFYIAIELENGSWKLC 276
+ + + E+T I QFY + N LC
Sbjct: 204 QTVSINRREVTAPSIDQFYYKVLERNKLDSLC 235
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 79.4 bits (187), Expect = 8e-14
Identities = 40/92 (43%), Positives = 56/92 (60%)
Frame = +3
Query: 234 LHCN*IREWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQR 413
+ C ++E K E LC LY ++I +VIF TR D + M VSA+HG +
Sbjct: 315 MDCPSLKE-KYEVLCKLYGLMTIGSSVIFVKTRESADEIQRRMEADGHKVSALHGAFQGQ 373
Query: 414 EREVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
ER+ ++ FR+G S+VLITT++LARGIDV V
Sbjct: 374 ERDQLLDDFRSGKSKVLITTNVLARGIDVSSV 405
Score = 56.0 bits (129), Expect = 8e-07
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+KL V+DEAD ML + G +Q V ML +Q +L SAT PD V + F ++
Sbjct: 239 LKLLVVDEADNMLDQQGLGEQCVRVKNMLPKTIQTLLFSATFPDHVKSYAEKFAPQANQM 298
Query: 190 LVQKEELTLEGIKQFYI 240
++++ELT++GI Q Y+
Sbjct: 299 KLRQQELTVKGISQMYM 315
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/87 (40%), Positives = 54/87 (62%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
+ KLE L L D +++FCNT+RKVD L + +R + +HGD+ Q +R+ +M
Sbjct: 228 DMKLELLSRLLDLHDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMS 287
Query: 435 QFRTGSSRVLITTDLLARGIDVQQVPA 515
+F+ G+ +L+ TD+ ARGIDV V A
Sbjct: 288 KFKKGNIEILVATDVAARGIDVGGVEA 314
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/81 (35%), Positives = 51/81 (62%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N IK +LDEADEML GF++ I + + + + Q +L SAT+P ++L++++ + +P
Sbjct: 146 NNIKTVILDEADEMLDMGFREDIEYILEDIPYERQFLLFSATLPQEILQLAQRYQTNPEI 205
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
+ V K ELT ++Q Y ++
Sbjct: 206 VKVTKHELTTPDVEQKYFEVK 226
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
+ ETLC + D A+IFC T++ VD + E M R + V MHGDM Q R +R+F
Sbjct: 232 RFETLCRVLDFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKF 291
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ GS L+ TD+ ARGIDV+ V
Sbjct: 292 KEGSLDFLVATDVAARGIDVESV 314
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR-DPV 183
N I VLDEADEML+ GF D + ++ K L D Q +L SATMP + +++R +M+ D
Sbjct: 147 NDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDRQTLLFSATMPPQIKKLARNYMKEDTK 206
Query: 184 RILVQKEELTLEGIKQFYIAIELENGSWKLC 276
I ++K LT+ I+QFY I+ + LC
Sbjct: 207 HIAIKKSSLTVSKIEQFYFEIKHRDRFETLC 237
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 77.0 bits (181), Expect = 4e-13
Identities = 34/85 (40%), Positives = 54/85 (63%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K E L L + ++ A++FCNT+ +VD + E + R + A+HGD++Q++R+ +M F
Sbjct: 235 KGEALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMSGF 294
Query: 441 RTGSSRVLITTDLLARGIDVQQVPA 515
R GS +L+ TD+ RGIDV V A
Sbjct: 295 RKGSIEILVATDVAGRGIDVNNVEA 319
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
H + IK+ VLDEADEML GF++ + + K AD Q I+ SATM DDVL + + F P
Sbjct: 149 HLDEIKIVVLDEADEMLDMGFREDMEFILKDTPADRQTIMFSATMTDDVLTLMKKFQNHP 208
Query: 181 VRILVQKEELTLEGIKQFYIAIE 249
I V ++L+ I+Q Y I+
Sbjct: 209 QIIDVTHQKLSAPKIEQIYYEIQ 231
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 77.0 bits (181), Expect = 4e-13
Identities = 31/87 (35%), Positives = 57/87 (65%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
R+ K+E L +++ SI QA++F T+R D + +H F+V+A+HGD Q R +
Sbjct: 228 RDKKMELLNEVFGVESIDQALVFTRTKRSADKCSSYLHTLGFSVAALHGDKSQSVRSKTL 287
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQVP 512
+F+ G +++L+ TD+ ARG+D++++P
Sbjct: 288 EKFKNGKTKILVATDIAARGLDIKELP 314
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I V DEAD M GF I + KML Q +L SAT P +V+ + ++DP+RI
Sbjct: 149 IDTLVFDEADRMFDMGFIHDIKQIVKMLPEKRQNLLFSATYPSEVMSLCNSMLKDPLRIQ 208
Query: 193 VQKEELTLEGIKQFYIAIE 249
++++ T I Q I ++
Sbjct: 209 IEEQNSTALNIIQRVILVD 227
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 76.6 bits (180), Expect = 5e-13
Identities = 30/83 (36%), Positives = 53/83 (63%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+E L + ++ QA++FC T+++VD + E ++ R + +HGDM QRER ++ F
Sbjct: 226 KIEGLVSILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSF 285
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G + +L+ TD+ ARG+D+ V
Sbjct: 286 KAGKTELLVATDVAARGLDIPDV 308
Score = 53.2 bits (122), Expect = 6e-06
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +1
Query: 4 ANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 183
A IK+ +LDEADEML GF D I + L+ Q +L SAT+P + + + F+
Sbjct: 141 AAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYK 200
Query: 184 RILVQKEELTLEGIKQFY 237
+ + E T+ I+Q Y
Sbjct: 201 TVKLVGREKTVPAIRQVY 218
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 75.8 bits (178), Expect = 9e-13
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K +TL L D S A++F T+R+VD L E+++LR + +HGD+ Q +R V +R+F
Sbjct: 228 KFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKF 287
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G+ VL+ TD+ ARG+D+ V
Sbjct: 288 KEGAIEVLVATDVAARGLDISGV 310
Score = 71.7 bits (168), Expect = 2e-11
Identities = 30/81 (37%), Positives = 51/81 (62%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N + V+DEADEML+ GF D I + + ++ Q +L SATMP + ++ FM +P
Sbjct: 144 NNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEH 203
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
+ V+ +E+T+ I+QFY+ ++
Sbjct: 204 VKVKAKEMTVSNIQQFYLEVQ 224
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 75.4 bits (177), Expect = 1e-12
Identities = 31/85 (36%), Positives = 51/85 (60%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
+E K LC+LY L+IAQ ++FC TRR WL ESM V + G+M +R ++
Sbjct: 286 KEEKFSALCNLYGCLTIAQTIVFCQTRRMASWLAESMTREGHQVGVLSGEMTVEQRAAVI 345
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQ 506
++R G +VL+TT++ +R +++
Sbjct: 346 ERYREGKEKVLVTTNVCSRAAGLRR 370
Score = 39.9 bits (89), Expect = 0.057
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 88 KMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYI 240
++L Q++ SAT D V E + + +P I +++EE TL+ I+QFYI
Sbjct: 231 RLLPKGCQMLFFSATFEDSVWEFAERIIPEPNYIRLKREEETLDNIRQFYI 281
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KLET+ L +A+ FCNT+ D L+ + +R T A+HGD+ QR RE ++ F
Sbjct: 239 KLETMVALLTHGGYERAIAFCNTKNMTDRLSGLLQMRGITAQAIHGDIQQRIREKTLQAF 298
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G RVL+ TD+ ARG+D+ V
Sbjct: 299 REGKMRVLVATDVAARGLDIDDV 321
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/94 (30%), Positives = 50/94 (53%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
++ VLDEAD ML GF + + + + + L SAT+ +V+++S + RDPV I+
Sbjct: 156 VETVVLDEADRMLDMGFIHDVTRILDQIKSRKNLGLFSATISREVMDISWVYQRDPVEIV 215
Query: 193 VQKEELTLEGIKQFYIAIELENGSWKLCVTCMIH 294
V+ +E I+Q+ I +E + V + H
Sbjct: 216 VRPDEENKPDIQQYRIDLEGRGDKLETMVALLTH 249
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 75.4 bits (177), Expect = 1e-12
Identities = 30/80 (37%), Positives = 55/80 (68%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ + L VLDEAD+ML GF++ I ++ + + Q ++LSAT P ++L++SR F ++P+
Sbjct: 146 DAVSLVVLDEADQMLDMGFREDIEEILSHIPKERQTVILSATFPPEILDISRRFQKNPID 205
Query: 187 ILVQKEELTLEGIKQFYIAI 246
+ + +ELT+ I+Q+YI +
Sbjct: 206 VKMVHQELTVPQIEQYYIEV 225
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K +TL + + + +IFCNT+ VD ++ ++ F +HG M Q +R+ +M F
Sbjct: 230 KADTLIRVLEFYQPQRTIIFCNTQIAVDAVSSALKAEGFLADGLHGGMAQAQRDKVMNAF 289
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G +LI TD+ ARGIDV+++
Sbjct: 290 RKGQLEILIATDVAARGIDVEEI 312
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/86 (36%), Positives = 57/86 (66%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
++ +L L + A V+FCNT+R + E++ +R +VSA+HGD++QR+R+ ++
Sbjct: 226 KDQRLPLLIAILSHYQPASCVVFCNTKRDCQSVFEALEMRGISVSALHGDLEQRDRDQVL 285
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
+F S RVL+ TD+ ARG+D++++
Sbjct: 286 VRFSNRSCRVLVATDVAARGLDIKEL 311
Score = 56.4 bits (130), Expect = 6e-07
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+++K+ VLDEAD ML GF D I DV +D Q +L SAT P ++ ++S R P R
Sbjct: 146 DSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDRQTLLFSATYPQEIEQISARVQRQPQR 205
Query: 187 --ILVQKEELTLEGIKQFY 237
I EE +E ++FY
Sbjct: 206 FEIADDVEESAIE--QRFY 222
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/92 (39%), Positives = 56/92 (60%)
Frame = +3
Query: 234 LHCN*IREWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQR 413
L C+ + K E L LYD L I Q+++FC + D + E + V+++HGD +
Sbjct: 367 LECD-SEDQKYEALSALYDCLVIGQSIVFCKRKVTADHIAERLISEGHAVASLHGDKLSQ 425
Query: 414 EREVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
ER+ I+ FR G ++VLITT+++ARGID+ V
Sbjct: 426 ERDAILDGFRNGETKVLITTNVIARGIDIPAV 457
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/98 (32%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
I++ VLDEADE++++ G +Q + ++L +VQ +L SAT DDV E + F + +I
Sbjct: 291 IRVLVLDEADELIAQQGLGEQTFRIKQLLPPNVQNVLFSATFNDDVQEFADRFAPEANKI 350
Query: 190 LVQKEELTLEGIKQFYIAIELENGSWKLCVTCMIHCLL 303
++KE++T++ I+Q Y+ + E+ ++ ++ + CL+
Sbjct: 351 FLRKEDITVDAIRQLYLECDSEDQKYE-ALSALYDCLV 387
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/63 (50%), Positives = 52/63 (82%)
Frame = +1
Query: 70 QIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 249
+I+++F++L +QV + SATMP +VLE+++ F+ PVRILV++EELTLEGI+QF++ +E
Sbjct: 110 KIYEIFQLLPERIQVGVFSATMPPEVLEITKKFINKPVRILVKREELTLEGIRQFHVNVE 169
Query: 250 LEN 258
E+
Sbjct: 170 RES 172
Score = 72.9 bits (171), Expect = 7e-12
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSR 458
++VIF NTRRKVD T+ + RD TVSA HGDMDQ+ R++IMR+FR+GS R
Sbjct: 171 ESVIFANTRRKVDCFTDQLRSRDHTVSATHGDMDQKTRDLIMREFRSGSMR 221
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/83 (39%), Positives = 54/83 (65%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L L D S A++F T+R+VD L+E+++LR + +HGD+ Q +R ++R+F
Sbjct: 227 KFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKF 286
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ GS VL+ TD+ ARG+D+ V
Sbjct: 287 KEGSIEVLVATDVAARGLDISGV 309
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
++ VLDEADEML+ GF + I + + Q +L SATMPD + ++ FM +P I
Sbjct: 145 VETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIK 204
Query: 193 VQKEELTLEGIKQFYIAIE 249
V+ +E+T+ I+QFY+ ++
Sbjct: 205 VKAKEVTMPNIQQFYLEVQ 223
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/83 (38%), Positives = 53/83 (63%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+E L L D ++FC T+ D + +S+ R + V+A+HGD+ Q +RE I+ +F
Sbjct: 272 KIEALVRLIDVSDNFYGLVFCQTKADADTVAKSLDERHYHVAALHGDIPQSQREKILERF 331
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
RT +R+L+ TD+ ARGID++ +
Sbjct: 332 RTKRARILVATDVAARGIDIEGI 354
Score = 56.8 bits (131), Expect = 5e-07
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 171
++ F+LDEADEML+ GF + I +F + D +V++ SATMP +L ++ FM
Sbjct: 190 LRYFILDEADEMLNMGFVEDIESIFSHANKDARVLMFSATMPRQILSIASTFM 242
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/86 (37%), Positives = 54/86 (62%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
R +K L + D S A++FC TR +VD L +S++ R + ++HG M Q +RE +M
Sbjct: 285 RAYKTAALGRILDVESPRSAIVFCRTREEVDQLADSLNGRGYRAESLHGGMSQEQRERVM 344
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
+ RT ++ +L+ TD+ ARG+D +Q+
Sbjct: 345 ERLRTATADLLVATDVAARGLDFEQL 370
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
VLDEADEML GF + I + + Q +L SAT+P + +++R +RDPVRI +
Sbjct: 207 VLDEADEMLDMGFAEDIDAILEQAPQKRQTVLFSATLPPRMDQIARRHLRDPVRIQI 263
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 REWKLETLC-DLYDTL-SIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREV 425
+E KL+TL D+YDT S + +IF T+R+VD L + A+HGD Q ER+
Sbjct: 512 KEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDF 571
Query: 426 IMRQFRTGSSRVLITTDLLARGIDVQQV 509
++R+FR+G S +L+ TD+ ARG+DV +
Sbjct: 572 VLREFRSGKSNILVATDVAARGLDVDGI 599
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
VLDEAD ML GF+ QI + + D Q ++ SAT P +V +++ F+ + ++I +
Sbjct: 433 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSL 492
Query: 205 ELT 213
EL+
Sbjct: 493 ELS 495
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 72.5 bits (170), Expect = 9e-12
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L +L + QA++F + D L + ++ + +A+HGD Q ERE + QF
Sbjct: 223 KTKALIELIQKNAWTQALVFIGAKENADGLAKKLNKAGISTNALHGDKSQAEREAALAQF 282
Query: 441 RTGSSRVLITTDLLARGIDVQQVP 512
++G ++VLI TDLLARGI ++Q+P
Sbjct: 283 KSGQTQVLIATDLLARGIHIEQLP 306
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ I VLDEAD +L+ GF + ++ +S Q + SAT D++ ++ M+ P +
Sbjct: 139 SNIHYLVLDEADRLLNMGFWPDVQNIAGQISNQRQTAMFSATFSDELKGKAKLLMQAPKQ 198
Query: 187 ILVQKEELTLEGIKQ 231
+ +E T + I +
Sbjct: 199 VAAHQENSTNQDIAE 213
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 72.5 bits (170), Expect = 9e-12
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E K L LY+ LSI+Q +IF +T+ V++L + + +VS +HGD++ ERE +
Sbjct: 266 ENKRRALKSLYEYLSISQMIIFVSTKATVNYLRKKLEDDLHSVSCLHGDLEIEEREKAVG 325
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
FR+ S++L+TTD+ +RG+D+ QV
Sbjct: 326 DFRSSKSKILLTTDVFSRGMDIPQV 350
Score = 41.1 bits (92), Expect = 0.025
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFK-DQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+K+ VLDEAD +L + Q + K++S Q+I SAT + V + + D V++
Sbjct: 187 VKMIVLDEADILLDKDMMGTQTFRILKLISG-AQMIFFSATFSEQVKQTIEFYAPDAVKM 245
Query: 190 LVQKEELTLEGIKQFYIAIELEN 258
++ E IK FYI E EN
Sbjct: 246 YEERNGKPDE-IKLFYIEAEGEN 267
>UniRef50_UPI0000E495C3 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 209
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/39 (84%), Positives = 37/39 (94%)
Frame = +3
Query: 393 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
HGDMDQ+ER+ IM++FRTGSSRVLI TDLLARGIDVQQV
Sbjct: 102 HGDMDQKERDKIMKEFRTGSSRVLICTDLLARGIDVQQV 140
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 509 SCVINYDLPSNRENY 553
S VINYDLP+NRENY
Sbjct: 141 SLVINYDLPTNRENY 155
>UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic
initiation factor 4AI; n=1; Pan troglodytes|Rep:
PREDICTED: similar to eukaryotic initiation factor 4AI -
Pan troglodytes
Length = 151
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +1
Query: 82 VFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 249
+F + AD V+LLSA MP DVLEV++ FMRDP+ ILV+KEELTLEG+ FY+ +E
Sbjct: 96 MFVLDEADEMVVLLSAIMPSDVLEVTKKFMRDPIWILVRKEELTLEGVCSFYVNME 151
>UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9;
Bacteroidetes|Rep: ATP-independent RNA helicase -
Psychroflexus torquis ATCC 700755
Length = 443
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/83 (38%), Positives = 55/83 (66%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KL+TL DL L A ++FCN R +D ++ ++ ++ + + G M+Q++RE + +F
Sbjct: 217 KLKTLVDLVHHLGNAPGIVFCNLRDSIDEVSSYLNRQNISHACFSGVMEQKDRERALIKF 276
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R GSS++L+ TDL ARGID+ ++
Sbjct: 277 RNGSSQILVATDLAARGIDIPEL 299
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/85 (38%), Positives = 52/85 (61%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K E + + D ++ +IFCNT+RKV+ +T+ + ++HGD QR+R +M +F
Sbjct: 227 KTEIVTQIIDLNNLQLMLIFCNTKRKVEEVTDELKAYGHNPISLHGDKTQRDRTEVMSKF 286
Query: 441 RTGSSRVLITTDLLARGIDVQQVPA 515
R G + +L+ TD+ ARGIDV V A
Sbjct: 287 RKGLANILVATDVAARGIDVTGVDA 311
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/83 (33%), Positives = 53/83 (63%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
+A+ + +LDEADEML+ GF++ I + L + Q +L SAT+ +L +++ F +P
Sbjct: 141 NASHLSQIILDEADEMLNMGFREDIELILTRLPEERQTVLFSATLAPPILALAKRFQNNP 200
Query: 181 VRILVQKEELTLEGIKQFYIAIE 249
I ++++ELT+ ++QFY ++
Sbjct: 201 EIIKIERKELTISTVEQFYYLVK 223
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 71.3 bits (167), Expect = 2e-11
Identities = 29/84 (34%), Positives = 51/84 (60%)
Frame = +3
Query: 258 WKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 437
+K E L + D ++ + + FC T++ VD L E++ R + +HGDM+Q +R +M +
Sbjct: 230 FKTEALTRILDIENVERGICFCRTKKGVDELVEALQARGYQAEGIHGDMNQAQRNRVMSR 289
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
F+ G +L+ TD+ ARG+D+ V
Sbjct: 290 FKEGYIELLVATDVAARGLDISDV 313
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/78 (38%), Positives = 50/78 (64%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++ VLDEADEML GF + I + + A+ Q +L SATMP ++ ++ +MRDP+ I
Sbjct: 149 VRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLLFSATMPPEIRRLAGRYMRDPITIS 208
Query: 193 VQKEELTLEGIKQFYIAI 246
V ++LT+ I Q++ +
Sbjct: 209 VTPQQLTVPQIDQYFCEV 226
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/83 (36%), Positives = 52/83 (62%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
+++ +C ++D +A++F T++ VD L ++ R A+HGD++Q +RE +M +F
Sbjct: 231 RVDAVCRIFDAYIPRKAIVFRATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRF 290
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G VL+ TD+ ARG+DV V
Sbjct: 291 RAGGISVLVATDVAARGLDVDDV 313
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++ VLDEADEML GF++ I + + VQ SATMPD +LE++R F+R+P +
Sbjct: 149 VRMTVLDEADEMLDMGFREDIERILSEMPEWVQSAFFSATMPDGILELARRFLREPELLR 208
Query: 193 VQKEELTLEGIKQFYIAI 246
V + +LT+ +Q + +
Sbjct: 209 VTRRQLTVANTEQAWFEV 226
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/104 (36%), Positives = 59/104 (56%)
Frame = +3
Query: 249 IREWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVI 428
IRE K+E L D+ + + ++F N +R +L E + + F V A+HGD+ QR RE I
Sbjct: 192 IRE-KIELLEDVLRDFN--KVIVFVNRKRDAKFLGEKLSTKGFRVGALHGDLPQRRREEI 248
Query: 429 MRQFRTGSSRVLITTDLLARGIDVQQVPASSTMICHPTVKIIFT 560
+++FR G VL+ TD+ +RG+D+ +V A K FT
Sbjct: 249 LKKFRRGFINVLVATDVASRGLDISEVEAVVNFHLPEDPKFTFT 292
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
++ FVLDE D ML FK+ I ++ L + QV +SAT P +V E+S + + P I
Sbjct: 113 VRYFVLDEVDVMLDMNFKEDIDFIYSQLPEEKQVFFVSATFPKEVRELSHRYTKKPEFIK 172
Query: 193 VQKEEL 210
V+ EL
Sbjct: 173 VESREL 178
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = +3
Query: 267 ETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRT 446
+ L L D + + +IFC +++VD L + + F VS +HGDM+Q++REV +R F+
Sbjct: 225 DALVRLIDYKNPEKCIIFCRMKKEVDRLVAHLTAQGFKVSGLHGDMEQKQREVTIRAFKQ 284
Query: 447 GSSRVLITTDLLARGIDVQQV 509
G + + TD+ ARG+DV V
Sbjct: 285 GGIDIFVATDVAARGLDVNDV 305
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
VLDEADEML GF D+I ++F L + Q ++ SATMP+ + +++ + +P + + K
Sbjct: 145 VLDEADEMLDMGFLDEIKNIFTFLPKERQTLMFSATMPNGIRKLAEQILNNPKTVSITKS 204
Query: 205 ELTLEGIKQFYIAIE 249
E T I Q+Y ++
Sbjct: 205 ESTNSKITQYYYVVQ 219
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/83 (36%), Positives = 53/83 (63%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L L D + A++F T+R+VD L E+++LR + +HGD+ Q +R ++R+F
Sbjct: 227 KFDILTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKF 286
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G+ +L+ TD+ ARG+D+ V
Sbjct: 287 KEGAIEILVATDVAARGLDISGV 309
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/82 (39%), Positives = 53/82 (64%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
H +T+ VLDEADEML+ GF + I + + A+ Q +L SATMPD + ++ FM +P
Sbjct: 144 HVHTV---VLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNEP 200
Query: 181 VRILVQKEELTLEGIKQFYIAI 246
+ V+ +E+T+ I+Q+Y+ +
Sbjct: 201 ELVKVKAKEMTVPNIQQYYLEV 222
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L L D A++F NT++ VD +T + + F A+HGD+ Q +R+ +M F
Sbjct: 229 KAKLLVRLLDLKKDYSAILFANTKKDVDEITAYLQDKGFLADAVHGDLKQNQRQYVMNNF 288
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G ++LI TD+ ARG+D+ +
Sbjct: 289 RKGKIKILIATDVAARGLDISDI 311
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/81 (28%), Positives = 47/81 (58%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ +K+ LDEADEML GF++ + + K + + Q +L SAT+P + +++ + +D
Sbjct: 145 SALKILTLDEADEMLKMGFQEALETILKKIPEERQTVLFSATLPPFIKKIASKYQKDTKI 204
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
+ V + + + I+Q Y ++
Sbjct: 205 LQVPVKNIAVNAIEQNYFLVK 225
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/85 (40%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLS--ADVQVILLSATMPDDVLEVSRCFMRDP 180
+ IKLFV+DEADEML GF++Q+ +F+ ++ +VQ+ + SAT ++ L VS + +P
Sbjct: 179 DNIKLFVIDEADEMLKAGFQEQVKSIFRRITNKDEVQIAMFSATYDEEELRVSEEILINP 238
Query: 181 VRILVQKEELTLEGIKQFYIAIELE 255
V I ++ + TL+GI+Q++I + E
Sbjct: 239 VIIDLRYNDQTLKGIRQYFIDLRKE 263
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/83 (30%), Positives = 49/83 (59%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KL TL D++ + Q+++F N++ + + + ++ + ++ Q ERE + +F
Sbjct: 277 KLVTLYDIFRKQRLGQSIVFINSKEDARIVYDWLIRHEWECELISAELTQAERERTLNRF 336
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G+ R LI++ LL+RGID+Q +
Sbjct: 337 RGGTGRCLISSGLLSRGIDIQNL 359
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 69.3 bits (162), Expect = 8e-11
Identities = 30/88 (34%), Positives = 53/88 (60%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
++ VLDEAD ML GF D + ++ K + + L SATMP ++++++R FM++ + +
Sbjct: 163 VEYLVLDEADRMLDMGFLDDVLEIIKRTGENKRTFLFSATMPKEIVDIARKFMKEYIHVS 222
Query: 193 VQKEELTLEGIKQFYIAIELENGSWKLC 276
K+ELT E +Q Y ++ ++ LC
Sbjct: 223 TVKDELTTENAEQLYFEVDEKDKLPLLC 250
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KL LC + D ++FC T+ +VD +++ + + +HGD Q +RE ++ +F
Sbjct: 245 KLPLLCRIIDMNPDFYGIVFCQTKLEVDEISKKLLDLGYNADGLHGDYSQYQRERVLDKF 304
Query: 441 RTGSSRVLITTDLLARGIDV 500
R R+L+TTD+ ARGID+
Sbjct: 305 RKKQLRILVTTDVAARGIDI 324
>UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 07 contig 1, DNA
sequence - Ostreococcus tauri
Length = 506
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = -2
Query: 515 RRNLLYINTTCQ*ISGDQDTRRASTKLPHDHFTLTLIHVSMHSRYSKVTQMHRFSEPIHL 336
+RNLL ++TT + +SGDQ T RA +L HD T LIH+++ ++ H EP++L
Sbjct: 104 QRNLLDVDTTSKQVSGDQHTGRAGAELAHDDVTGVLIHITVRGGDGEIAGTHVVREPVNL 163
Query: 335 ATGVAENYSLCNRQCIIQVTQSFQLP 258
T V E+ L N + +Q+ + QLP
Sbjct: 164 TTSVREDNGLRNGERFVQIAERVQLP 189
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/80 (40%), Positives = 53/80 (66%)
Frame = -1
Query: 240 NVKLFNTFQGKLFLLYKYAYRISHKASRYFQYIIRHGSRE*YDLNIS*QHLEDIMDLVLE 61
+V+L NTF+G+ L + A+R+ H+ +R + + R E +LN+ + ED++DL+LE
Sbjct: 196 DVELLNTFKGEFVTLDQNAHRLGHELARDLERLRRKRRGENTNLNLRREQGEDVVDLILE 255
Query: 60 TSGQHFISFIKNKKFDGVGM 1
TSG+HFI F+K+K D V +
Sbjct: 256 TSGKHFIGFVKSKDLDVVAL 275
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 69.3 bits (162), Expect = 8e-11
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGD-------MDQRER 419
KL L DLY +SI Q++IF NTR+ + E+M +S + G MD R
Sbjct: 337 KLSFLSDLYACMSIGQSIIFVNTRKTAFSIAENMRRDGHAISVICGTQTNSGEKMDHEIR 396
Query: 420 EVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
+ +M FR+G S+VLI TD+L+RGIDV QV
Sbjct: 397 DQVMDSFRSGESKVLIATDVLSRGIDVPQV 426
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRG--FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+KL V+DEADEM+ Q+ + K ++Q++L SAT ++V + + + +
Sbjct: 252 MKLMVIDEADEMIDHRNMMASQVGQIRKFFRQNLQILLFSATYHEEVRLFAEKIVPNANK 311
Query: 187 ILVQKEELTLEGIKQFYI 240
I V+KEELTL I+QFY+
Sbjct: 312 INVKKEELTLNTIQQFYV 329
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/76 (39%), Positives = 48/76 (63%)
Frame = +3
Query: 282 LYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRV 461
L + + A+IFCN +R+V + +S+ F+V A+HGDMDQ R + QFR G +
Sbjct: 239 LREAKDLKNAIIFCNRKREVAIVHKSLQKHGFSVGALHGDMDQPARMAALEQFRKGELPL 298
Query: 462 LITTDLLARGIDVQQV 509
L+ +D+ ARG+D+ +V
Sbjct: 299 LVASDVAARGLDIPEV 314
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
++L V+DEAD ML GF I + K++ Q + +ATMP ++ ++ F+ +P ++
Sbjct: 147 VELLVIDEADRMLDMGFIPDIERICKLVPFTRQTLFFTATMPPEIRRITETFLHNPQKVE 206
Query: 193 VQKEELTLEGIKQ 231
V K T + Q
Sbjct: 207 VSKPATTAVTVTQ 219
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/83 (34%), Positives = 52/83 (62%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K++ L D+ + +IFCNT+++VD + + + ++T +HG M+QR+R +M +F
Sbjct: 229 KMKLLSDITIVENPDSCIIFCNTKQRVDEVNDELIRLNYTCEKIHGGMEQRDRVRVMNEF 288
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G R L+ TD+ ARGID+ +
Sbjct: 289 KQGYFRYLVATDVAARGIDIDNI 311
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/79 (40%), Positives = 47/79 (59%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
IK V+DEADEM + GF DQI + K LS +LLSATMP + +S +M+DP+
Sbjct: 147 IKYLVIDEADEMFNMGFVDQIETIIKDLSKKRVTMLLSATMPSAIETLSNRYMKDPIHAE 206
Query: 193 VQKEELTLEGIKQFYIAIE 249
+++E ++ I Q +E
Sbjct: 207 IEEESSAVDRISQERYTVE 225
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 68.9 bits (161), Expect = 1e-10
Identities = 28/73 (38%), Positives = 47/73 (64%)
Frame = +3
Query: 294 LSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 473
L + Q ++FC T++ VD +T + R+ + A+HGD Q+ R + F+ GS RVL+ T
Sbjct: 273 LHMNQVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGSLRVLVAT 332
Query: 474 DLLARGIDVQQVP 512
D+ ARG+D+ ++P
Sbjct: 333 DIAARGLDIAELP 345
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N +++ VLDEAD ML GF D I + +ML Q +L SAT + ++++ FM P
Sbjct: 178 NKVEIVVLDEADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATFSAPIRKLAQDFMNAPET 237
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
+ V + T ++Q IA++
Sbjct: 238 VEVAAQNTTNANVEQHIIAVD 258
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/87 (37%), Positives = 52/87 (59%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E K+E L + + +I +IFCNT+R+V L ++ ++ +HGD+ Q +RE +M
Sbjct: 224 EDKVELLDWILSSNNIRMGLIFCNTKRRVQRLRRQLNRMGYSADEIHGDLSQSKRERVME 283
Query: 435 QFRTGSSRVLITTDLLARGIDVQQVPA 515
+FR G +L+ TD+ ARGI V V A
Sbjct: 284 RFRRGDFSLLVATDVAARGIHVPDVEA 310
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/82 (36%), Positives = 45/82 (54%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I VLDEADEML+ GF D I + + Q +L SAT+ +L ++R +MR+P +
Sbjct: 146 ISTVVLDEADEMLNMGFIDDIERILSHVPERRQTMLFSATVSKPILRIARKYMRNPQVMR 205
Query: 193 VQKEELTLEGIKQFYIAIELEN 258
V+K+ I +FY E+
Sbjct: 206 VEKKH--SPKIDEFYFKTREED 225
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/83 (38%), Positives = 52/83 (62%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L +LY ++I ++IF T++ + L + VS +HGD+ +ER+ ++ F
Sbjct: 317 KFDVLTELYGLMTIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDF 376
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G S+VLITT++LARGID+ V
Sbjct: 377 REGRSKVLITTNVLARGIDIPTV 399
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
IK+FVLDEAD ML + G DQ V + L D Q++L SAT D V + ++ + + +
Sbjct: 233 IKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVPNANTL 292
Query: 190 LVQKEELTLEGIKQFYI 240
+Q E+ ++ IKQ Y+
Sbjct: 293 ELQTNEVNVDAIKQLYM 309
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/79 (39%), Positives = 55/79 (69%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
TI+LFVLDEAD++L F++Q++ ++ LS + Q++ LSAT P+ + + +MR+P+ +
Sbjct: 108 TIRLFVLDEADKLLDDTFQEQVNWIYNHLSDNKQMLALSATYPEYLAKHLTKYMREPMFV 167
Query: 190 LVQKEELTLEGIKQFYIAI 246
+ ++L L GIKQ Y+ +
Sbjct: 168 RLNPKDLALRGIKQLYVEL 186
Score = 42.3 bits (95), Expect = 0.011
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E K+ L + +S Q +IF N + + L + + + + G +Q +R M
Sbjct: 197 EIKVIKLLKILTQVSFNQCLIFSNLQTRAQNLCDILCDSGWPSECISGAQEQSQRLSAMA 256
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+ + R+LI+TDL ARGID + V
Sbjct: 257 KLKKFQCRILISTDLTARGIDAENV 281
>UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7;
Bacteroidales|Rep: ATP-independent RNA helicase -
Bacteroides thetaiotaomicron
Length = 444
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/83 (37%), Positives = 52/83 (62%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K++TL +L +L + +++FCN R VD + + + + HG M+Q +RE + +F
Sbjct: 221 KIDTLYNLLCSLGSSSSIVFCNHRDAVDRVHKLLEDKKLLAERFHGGMEQPDRERALYKF 280
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R GS VLI+TDL ARG+D+ ++
Sbjct: 281 RNGSCHVLISTDLAARGLDIPEI 303
Score = 33.1 bits (72), Expect = 6.5
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDV 147
TI+ ++DE D+ L GF D++ ++ L + +LLSAT +++
Sbjct: 138 TIETLIIDEFDKSLEFGFHDEMAEIITQLPGLKKRMLLSATDAEEI 183
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KL L L++ + + +IF + + KV LT ++ F V+ MH D++Q +RE +MR F
Sbjct: 231 KLPILRKLFEQSAPKRTIIFASAKLKVRELTSTLRKMGFNVADMHSDLEQSQREQVMRDF 290
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G VL+ TD++ARGID+ +
Sbjct: 291 KNGYVDVLVATDIVARGIDIDNI 313
Score = 59.3 bits (137), Expect = 9e-08
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+ FVLDEAD ML GF D I ++K L + Q ++ SATMP + +++ +RDP+ +
Sbjct: 150 VSYFVLDEADRMLDMGFFDDIMQIYKQLPSSCQTVMFSATMPPKIRKLAASILRDPIEV 208
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 68.5 bits (160), Expect = 1e-10
Identities = 29/69 (42%), Positives = 49/69 (71%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
+V+FCNTR++VD + S+ F+ A+HGDM+QR+R+ ++ +F S VL+ +D+ AR
Sbjct: 268 SVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDVAAR 327
Query: 489 GIDVQQVPA 515
G+DV+ + A
Sbjct: 328 GLDVEDLSA 336
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
H ++ VLDEAD ML GF++ I ++ Q +L SAT PD + ++R ++DP
Sbjct: 167 HLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQSLLFSATFPDIIRTLAREILKDP 226
Query: 181 VRILVQKEELTLEGIKQFY 237
+ I V+ + E +QF+
Sbjct: 227 IEITVEGADNAPEIDQQFF 245
>UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2;
Frankia|Rep: DEAD/DEAH box helicase-like - Frankia sp.
(strain CcI3)
Length = 649
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/83 (39%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+E L + A++F TRR D + E + R F +A+HGD+ Q +RE +R F
Sbjct: 316 KMEVLARVLQAGGRGLAMVFVRTRRTADKVAEDLAKRGFAAAAVHGDLGQGQREQALRAF 375
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R+G VL+ TD+ ARGID+ V
Sbjct: 376 RSGKVDVLVATDVAARGIDINGV 398
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
VLDEADEML GF + + L + Q +L SATMP V+ ++R FM+ PV + ++
Sbjct: 236 VLDEADEMLDLGFLPDVERIMSQLPTERQTMLFSATMPGPVISLARRFMKRPVHVRAEQP 295
Query: 205 E 207
+
Sbjct: 296 D 296
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 68.5 bits (160), Expect = 1e-10
Identities = 34/76 (44%), Positives = 44/76 (57%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
IK VLDEADEML GFK + VF+ Q +L SATMP VLE++ + +PV I+
Sbjct: 144 IKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTLLFSATMPKQVLEIANNYQTNPVEIV 203
Query: 193 VQKEELTLEGIKQFYI 240
V K + I Q Y+
Sbjct: 204 VTKNVIEQNNISQHYV 219
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/91 (32%), Positives = 47/91 (51%)
Frame = +3
Query: 237 HCN*IREWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 416
+ N I K + L LY L +++IF NT+ + + E + ++GD + E
Sbjct: 218 YVNAISYHKEDVLIALYKHLQPKRSIIFSNTKVFTNKIAEMLTNNGIPCCIINGDKSRYE 277
Query: 417 REVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
R MR FR G RV++ TD+ ARGID+ +
Sbjct: 278 RGQAMRLFRDGKVRVMVATDVAARGIDIDNI 308
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+IFCNT+ V + E ++ +HGDM+QRER+ +M FR GS R+L+ TD+ ARG
Sbjct: 288 IIFCNTKNAVAEIAERLNDLGAASGCLHGDMEQRERDRVMAMFRNGSHRILVATDVAARG 347
Query: 492 IDVQQV 509
+D+ +
Sbjct: 348 LDIDNL 353
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ +K VLDEAD+ML GF D+I V + L Q +L SAT P+ + +SR + R +
Sbjct: 189 SAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQTVLFSATFPESIEHLSRKYQRHAQQ 248
Query: 187 ILVQKEELTL 216
++++ EE L
Sbjct: 249 VIIEDEEQNL 258
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + LC L+D + A+IFC T+R+ L E++ + +HGD+ Q +RE +M+ F
Sbjct: 228 KQDLLCQLFDEYNPFMAIIFCRTKRRAIALNEALINLGYNSDELHGDLTQAKREKVMKAF 287
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ + L+ TD+ ARG+D++ V
Sbjct: 288 KKSKIQYLVATDVAARGLDIEGV 310
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ + VLDEAD+ML GF + D+ + Q + SATMP+ V ++ +M+DPV+I
Sbjct: 146 LSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQNMFFSATMPNQVRTLAEQYMKDPVQIQ 205
Query: 193 VQKEELTLEGIKQFYI 240
VQ + +TL+ I+Q I
Sbjct: 206 VQSKRVTLDEIRQVVI 221
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +3
Query: 297 SIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTD 476
S + +IFC T+R D LT+ + L + +HGD Q ER ++ +FRTG+S ++I TD
Sbjct: 236 SAPKVLIFCETKRGADILTKELRLDGWPALCIHGDKKQEERTWVLNEFRTGASPIMIATD 295
Query: 477 LLARGIDVQQV 509
+ ARG+D++ +
Sbjct: 296 VAARGLDIKDI 306
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD-PVRI 189
+ VLDEAD ML GF+ QI + + D Q +L SAT P +V +++R ++ P+ I
Sbjct: 136 VTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQKLARDLCKEIPIHI 195
Query: 190 LVQKEEL--TLEGIKQFYIAIE 249
V + IKQ+ +E
Sbjct: 196 NVGSVDALKASHNIKQYVNVVE 217
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/69 (42%), Positives = 46/69 (66%)
Frame = +3
Query: 303 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 482
++ +IFC T+R D L ++ R F SA+HGD Q ERE ++ FR+G S +L+ TD+
Sbjct: 396 SKVLIFCTTKRMCDQLARTL-TRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVA 454
Query: 483 ARGIDVQQV 509
ARG+D++ +
Sbjct: 455 ARGLDIKDI 463
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ VLDEAD ML GF+ QI + K + Q ++ +AT P +V ++ + PV++
Sbjct: 297 VSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVT 356
Query: 193 V 195
+
Sbjct: 357 I 357
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/83 (39%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KL L L+ L I QA+IFCN+ +V+ L + + ++ H M Q+ER + +F
Sbjct: 270 KLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEF 329
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G R L+ +DLL RGID+Q V
Sbjct: 330 RQGKVRTLVCSDLLTRGIDIQAV 352
Score = 60.1 bits (139), Expect = 5e-08
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = +1
Query: 19 LFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQ 198
LF++DEAD+MLSR FK I + L Q +L SAT P V E + P I +
Sbjct: 191 LFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLM 250
Query: 199 KEELTLEGIKQFYIAIE 249
EELTL+GI Q+Y +E
Sbjct: 251 -EELTLKGITQYYAFVE 266
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 67.7 bits (158), Expect = 2e-10
Identities = 28/68 (41%), Positives = 46/68 (67%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
Q V+FC TR +V++L E + + D S M G DQ+ERE+ +++FR + VL+ TD+ A
Sbjct: 256 QTVVFCATRHEVEYLNEILKIFDIKTSIMFGKADQQEREINLKKFRKQETHVLLVTDVAA 315
Query: 486 RGIDVQQV 509
RG+D+ ++
Sbjct: 316 RGVDIPEL 323
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N +++ DEAD M GF +Q+ D+ +ML Q++L SAT+P ++ E + ++ P
Sbjct: 155 NRVEMVCFDEADLMFESGFSEQVSDIMRMLPPTRQILLFSATLPRNLAEFLKNTLKQPEI 214
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
I + EE + F+ ++
Sbjct: 215 IRLDTEERLSPDLDNFFYHVK 235
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K++ L D Q ++FC+T+ + + +H R++ A+ GDM Q RE M +F
Sbjct: 226 KMDYLVDFIKENGKGQTIVFCSTKYRTRDVARMLHKRNYGAVAIEGDMSQHRREQSMSRF 285
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
RT +++L+ TD+ ARGIDV +V
Sbjct: 286 RTAKAQILVATDVAARGIDVPRV 308
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
VLDEAD ML GF D I + + + + L SATMP ++L +S ++++P + L+ +
Sbjct: 148 VLDEADTMLDMGFIDDIQFILDLTPDEKVMSLFSATMPIEILRLSEEYLKNPKQFLLDAD 207
Query: 205 ELTLEGIKQFYIAI 246
+L+ EGI Q Y+ I
Sbjct: 208 DLSGEGIDQSYLVI 221
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/69 (42%), Positives = 48/69 (69%)
Frame = +3
Query: 303 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 482
++ +IFC+T+R D L ++ R F +A+HGD Q ER+ ++ QFR+G + VL+ TD+
Sbjct: 407 SKIIIFCSTKRMCDQLARNL-TRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVA 465
Query: 483 ARGIDVQQV 509
ARG+DV+ +
Sbjct: 466 ARGLDVKDI 474
Score = 41.9 bits (94), Expect = 0.014
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+ VLDEAD ML GF+ QI + + Q ++ +AT P +V +++ + +P ++
Sbjct: 308 VSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQV 366
>UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5;
Bacteroidetes|Rep: ATP-independent RNA helicase -
Flavobacteria bacterium BAL38
Length = 463
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+E+L L +L+ A+IFCN R V+ + + + + + HG +DQ ERE + QF
Sbjct: 217 KIESLFQLICSLNSEAAIIFCNHREAVERIHDMLTEKGIISTFYHGGLDQDERERALIQF 276
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R GS LITTDL ARG+D+ ++
Sbjct: 277 RNGSVSYLITTDLGARGLDIPEM 299
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAV-IFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 437
KL+ L D+ DTL I+ V IF +++ + L+ +M + + A+HGD Q +R+ IM+
Sbjct: 332 KLQKLLDILDTLKISDKVLIFSEQKQRCEQLSINMADKGYYTIALHGDKTQPQRDEIMKA 391
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
FR+G +R+L TDL +RG+DV +
Sbjct: 392 FRSGYTRLLCATDLASRGLDVTDI 415
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR-DPVRI 189
+ V+DEAD +L GF+D I ++ + + D Q + SAT P V +++ F + P+ +
Sbjct: 248 VSYLVIDEADRLLELGFEDTIREIVQQIRFDRQTVFFSATWPKAVKDLAFDFCQYSPIYV 307
Query: 190 LVQKEELTL 216
+ K LT+
Sbjct: 308 QIGKSNLTI 316
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K VLDEADEML GF + + +V + L A QV L SATMP + +++ +++DP+ +
Sbjct: 159 LKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFSATMPPQIRRIAQTYLQDPIEVT 218
Query: 193 VQKEELTLEGIKQFY 237
+ + T I+Q Y
Sbjct: 219 IATKTTTAANIRQRY 233
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KL+ L + + + +IF T+ + L E + R T +A++GDM Q +RE + Q
Sbjct: 241 KLDALTRILEVETFDAMIIFVRTKAATEELAEKLQARGLTAAAINGDMQQAQRERTIHQL 300
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G +L+ TD+ ARG+DV+++
Sbjct: 301 KDGKLDILVATDVAARGLDVERI 323
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+E + + + + +IFC T+R L++ + R F A+HGD+ Q RE +++F
Sbjct: 290 KIEIIGRILQANDVEKVIIFCRTKRACQRLSDDLDDRGFKTRAIHGDLTQVAREKALKKF 349
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G + +L+ TD+ ARGIDV V
Sbjct: 350 RHGDATILVATDVAARGIDVTGV 372
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++ VLDEADEML GF + ++ A Q +L SATMP ++ ++R + PV +
Sbjct: 206 VRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTMLFSATMPAPIMALARSQLHRPVHVR 265
Query: 193 VQ--KEELTLEGIKQF 234
+ + T+ +QF
Sbjct: 266 AEGADTQATVPDTQQF 281
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 66.5 bits (155), Expect = 6e-10
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +3
Query: 282 LYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRV 461
L + I ++FCN + +VD + +S+ F +A+HGD+DQ +R + FR GS ++
Sbjct: 240 LIEKAQIETGIVFCNRKTEVDVVAKSLKSHGFDAAAIHGDLDQSQRTKTLAAFRDGSLKI 299
Query: 462 LITTDLLARGIDVQQV 509
L+ +D+ ARG+D+ V
Sbjct: 300 LVASDVAARGLDIPAV 315
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
++ V+DEAD ML GF I +FKM Q + SATMP ++ +++ F++DPVRI
Sbjct: 148 VQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQTLFFSATMPPEITRLTKQFLKDPVRIE 207
Query: 193 VQKEELTLEGIKQFYIAI 246
+ T E I Q + +
Sbjct: 208 ASRPATTNENITQLMVKV 225
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/83 (38%), Positives = 52/83 (62%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KLE L ++ + + +IFC T+ V+ L++++ + F+ A+HG + Q R+ IM QF
Sbjct: 230 KLEVLLHFLNSKAGQRGIIFCKTKAAVNKLSKNLAINKFSSGAIHGSLTQGIRDRIMGQF 289
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G +L+ TDL ARGIDV+ +
Sbjct: 290 RDGYIDILVATDLAARGIDVKDL 312
Score = 37.9 bits (84), Expect = 0.23
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+I F+LDEADEM++ K+ + + K + + L +AT+P + ++ + +M P I
Sbjct: 147 SISYFILDEADEMVT-ALKEGLDSIIKEIPKARRTFLFTATLPGTLKQLIQNYMA-PKVI 204
Query: 190 LVQKEELTL--EGIKQFYIAI 246
++ TL +GI Y+ +
Sbjct: 205 QIEANMTTLGHQGIDHQYVVV 225
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
IK F+LDE D+ML + + + ++F+M + QV++ SAT+ ++ V R FM+DP+ I
Sbjct: 190 IKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEI 249
Query: 190 LVQKE-ELTLEGIKQFYIAIELENGSWKL 273
V E +LTL G++Q+Y+ ++ + KL
Sbjct: 250 FVDDETKLTLHGLQQYYVKLKDNEKNRKL 278
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K L DL D L Q VIF + ++ L + + ++F A+H M Q ER +QF
Sbjct: 274 KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQF 333
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ R+L+ T+L RG+D+++V
Sbjct: 334 KDFQRRILVATNLFGRGMDIERV 356
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 66.1 bits (154), Expect = 8e-10
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = +3
Query: 300 IAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 479
+ QA+IF T+R D L++ ++ D SA+HGDM Q R + +F+ +++L+ TDL
Sbjct: 243 VTQAIIFTATKRMADQLSDQLYHSDIKTSALHGDMSQGSRTKTINRFKRNETKILVATDL 302
Query: 480 LARGIDVQQV 509
+RGIDV+ +
Sbjct: 303 ASRGIDVKNI 312
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/73 (30%), Positives = 42/73 (57%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++ +LDEAD ML GF I ++ S Q+++ SAT + ++++ F+ +PV I
Sbjct: 147 LEVMILDEADRMLDMGFVPDIRKIYNATSKKQQMLMFSATFDPPIQKIAQEFLTNPVTIS 206
Query: 193 VQKEELTLEGIKQ 231
++ + + IKQ
Sbjct: 207 IKPDVSGHKNIKQ 219
>UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Probable ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 410
Score = 66.1 bits (154), Expect = 8e-10
Identities = 30/83 (36%), Positives = 51/83 (61%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + LC L + S +AV+FCN++ + L + F + +HGD+ Q+ R + F
Sbjct: 228 KDKQLCWLLENESYDKAVVFCNSKTEARRLDGFIRYHKFKAALLHGDVQQKGRFATIEGF 287
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G++++L+TTDL ARG+D++ V
Sbjct: 288 RKGTTKILVTTDLAARGLDIEGV 310
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+++ L VLDEAD +L GFK+ + + + Q +L+SAT+P V +++ +++P
Sbjct: 143 DSLDLLVLDEADRILETGFKEALDQILTLCPEARQTLLVSATLPTSVRKLAERILQEPEW 202
Query: 187 ILV-QKEEL 210
+ V QK E+
Sbjct: 203 VRVGQKREV 211
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/83 (37%), Positives = 55/83 (66%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
+ + +++ VLDEAD+ML+ GFK+++ ++FK+L Q +L SAT+ DV ++ + DP
Sbjct: 153 YLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKRQNLLFSATLGKDVDTITEFLLHDP 212
Query: 181 VRILVQKEELTLEGIKQFYIAIE 249
V+I + EE ++ I+Q A+E
Sbjct: 213 VKIEIIAEEQNIDLIQQIAYAVE 235
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
Q +IF ++ + D + E + + +A+H Q R ++QF+ G+ VL+ TDL++
Sbjct: 254 QVLIFTSSVHRADAVVEKLKANNILAAALHSKKSQGARTEALKQFKAGNIHVLVATDLMS 313
Query: 486 RGIDVQQVP 512
RGID+ +P
Sbjct: 314 RGIDIPFLP 322
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
+LE L DL S +A++F T+ + + + + + A+HGD+ Q ERE ++ F
Sbjct: 225 RLEVLSDLLYVASPDRAMVFTRTKAETEEIAQGLLRLGHLAQALHGDLSQGERERVLGAF 284
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G RVL+ TD+ ARG+D+ QV
Sbjct: 285 RQGEVRVLVATDVAARGLDIPQV 307
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++ VLDEADEMLS GF++++ + Q +L SAT+P ++ +M++PV I
Sbjct: 145 VEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLLFSATLPSWAKRLAERYMKNPVLIN 204
Query: 193 VQKEE 207
V K+E
Sbjct: 205 VIKDE 209
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E K L D+Y S+ Q +IFC +R+ +L +++ S + G++D ER+ +
Sbjct: 277 EDKYPKLIDIYGMKSMGQCIIFCESRKMACYLQKALERDSHLSSLLTGELDVLERQRQID 336
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
FR G SRVLI T+L +RGID+ QV
Sbjct: 337 DFRNGKSRVLIATNLCSRGIDIPQV 361
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+K+FVLDEAD ++ F + + ++ + Q++L SAT + V++ + F+ P
Sbjct: 195 LKVFVLDEADILIETPEFLNIAKRIKSKVTNNCQILLFSATYDERVMDFAHDFVPQPNEF 254
Query: 190 LVQKEELTLEGIKQFYIAIE 249
++ +ELTL+ IKQFYI ++
Sbjct: 255 SIKPQELTLKNIKQFYIQMK 274
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 65.7 bits (153), Expect = 1e-09
Identities = 25/66 (37%), Positives = 48/66 (72%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
++FCNT+ +V + ++ F+V A+HG+++Q++R+ + QF GS+RVLI TD+ +RG
Sbjct: 263 LVFCNTKNEVKDIFNTLRANKFSVLALHGELEQKDRDQAIIQFSNGSARVLIATDVASRG 322
Query: 492 IDVQQV 509
+D+ ++
Sbjct: 323 LDIAEL 328
Score = 41.9 bits (94), Expect = 0.014
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
VLDEAD ML GF+D ++ + K + Q +L SAT P ++ ++ + R + +
Sbjct: 169 VLDEADRMLEMGFQDSLNAIVKHIPKTRQTLLFSATYPKNIAALAE-QVTTKARNIEAIQ 227
Query: 205 ELTLEGIKQFYIAIELENGS 264
E I+Q + A+ E+ +
Sbjct: 228 EQAKPQIEQLFYAMNNEDSA 247
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K VLDEAD ML GF D++ D+ +VQ +L SAT PD V E++ +R+PV I
Sbjct: 150 LKALVLDEADRMLDLGFADELDDILDQTPGNVQTLLFSATFPDKVKELTEELLRNPVEIS 209
Query: 193 VQKEELTLEGIKQFYIAIELEN 258
V++E + + Q I ++ N
Sbjct: 210 VKQEATLPDQLHQRAIEVDRNN 231
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
Q +IF ++R + + ++ S +HGD+ Q+ER + F G ++LI TDL A
Sbjct: 247 QLLIFVGSKRTANNIELKLYRSGIQSSTLHGDLTQKERLGALEDFSKGRCKILIATDLAA 306
Query: 486 RGIDVQQVP 512
RGID+ +P
Sbjct: 307 RGIDIPSLP 315
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = +3
Query: 303 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 482
++ +IFC+T+R D L S+ R F +HGD Q ER+ ++ QFR+G S VLI TD+
Sbjct: 681 SKVIIFCSTKRLCDHLARSVG-RHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVA 739
Query: 483 ARGIDVQQV 509
ARG+D++ +
Sbjct: 740 ARGLDIKDI 748
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ L VLDEAD ML GF+ QI + + Q ++ +AT P +V +++ + +PV++
Sbjct: 582 VSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVN 641
Query: 193 VQK-EELTLEGIKQFYIAI 246
+ + +EL Y+ +
Sbjct: 642 IGRVDELAANKAITQYVEV 660
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 65.3 bits (152), Expect = 1e-09
Identities = 26/69 (37%), Positives = 47/69 (68%)
Frame = +3
Query: 303 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 482
++ +IFC+T+R D L ++ R + SA+HGD Q ER+ ++ +FR+G +L+ TD+
Sbjct: 477 SKIIIFCSTKRMCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVA 535
Query: 483 ARGIDVQQV 509
ARG+D++ +
Sbjct: 536 ARGLDIKDI 544
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+ VLDEAD ML GF+ QI + K + Q ++ +AT P +V +++ + +PV++
Sbjct: 378 VSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQV 436
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/84 (33%), Positives = 50/84 (59%)
Frame = +3
Query: 258 WKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 437
+K E + L TL +IFC T+ +V L + + R F ++HGD Q+ERE +++
Sbjct: 277 YKTEVIGRLLQTLPEFYGIIFCQTKMEVAELADVLTQRGFPADSLHGDKSQQEREATLKK 336
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
F+ +V++ TD+ ARG+D++ +
Sbjct: 337 FKQRQVKVIVATDVAARGLDIKDL 360
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD--------VQVILLSATMPDDVLEVSRC 165
++K VLDEADEMLS GFK+ + + D + L SATM +V ++
Sbjct: 187 SVKTVVLDEADEMLSMGFKEALETILSATQPDDSDSVRAACRTWLFSATMSSEVRRLTST 246
Query: 166 FMRDPVRILVQKEELTLEGIKQFYIAIE 249
++ +P + V K T + I+Q Y ++
Sbjct: 247 YLENPETVSVNKVGGTADTIEQVYYTVK 274
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/90 (36%), Positives = 51/90 (56%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++FVLDEAD+ML GF + + K+L + Q + SATMP + E+S F+ DPV +
Sbjct: 154 VEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQTLFFSATMPKTIQELSSQFLSDPVTVS 213
Query: 193 VQKEELTLEGIKQFYIAIELENGSWKLCVT 282
V + T E ++QF I + L +T
Sbjct: 214 VAPQSSTAERVEQFGIFVNQSEKQALLTIT 243
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 282 LYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRV 461
L +T + +A++F T+ D + + +A+HG+ Q +RE + FR G ++
Sbjct: 244 LKNTPGLDRALVFTRTKHGADRVVRHLEAAGLPAAAIHGNKSQPQRERALNAFRNGRLKI 303
Query: 462 LITTDLLARGIDVQQV 509
L+ TD+ ARGIDV V
Sbjct: 304 LVATDIAARGIDVPGV 319
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/79 (39%), Positives = 46/79 (58%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ VLDEADEML GF D + V D Q + SAT+PD++ + ++ DP+RI
Sbjct: 153 LNALVLDEADEMLRMGFIDDVKRVVSDTPKDAQRVFFSATLPDEISRIVNHYLVDPLRIA 212
Query: 193 VQKEELTLEGIKQFYIAIE 249
++ + T EGI+Q + IE
Sbjct: 213 IETKTKTAEGIEQRLVRIE 231
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KLE L L + + A++F TR L E + LR +A+ GD+DQ RE + +
Sbjct: 235 KLEALSRLLEVEPVDAAIVFVRTRAACTTLVEQLLLRGVNAAALSGDLDQSLRERTVERL 294
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G VLI TD+ ARG+DV ++
Sbjct: 295 KRGKVDVLIATDVAARGLDVPRI 317
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +3
Query: 258 WKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 437
W E L D D QA++F N + V+ L + R A+HGD+DQ +R+ M+
Sbjct: 293 WLFENLGDAVDE---GQAIVFVNHKSSVEELVNELATRGIKAVALHGDLDQAQRQFAMKA 349
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
F++ + VL+ TD+ ARG+DV+ +
Sbjct: 350 FKSEHAHVLVATDVAARGLDVEAI 373
Score = 41.1 bits (92), Expect = 0.025
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR-CFMRDPVRI 189
+ LDEAD ML GF+ + + + + D Q ++ SATMP + ++R RD V +
Sbjct: 206 VTYLALDEADRMLDMGFEKIVRSICQAVRPDRQCVMFSATMPAAMQRLARDVLARDAVTV 265
Query: 190 LVQKEELTLEGIKQFYIAIE 249
+ E ++Q E
Sbjct: 266 SIGNVGGANEDVRQVVYVFE 285
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/78 (35%), Positives = 48/78 (61%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N +K F+LDEADEML GF + + + + L Q+ L SATMP + +++ ++ DP
Sbjct: 148 NNLKTFILDEADEMLRMGFIEDVETILEKLPEKKQMALFSATMPYRIRQIANTYLNDPAS 207
Query: 187 ILVQKEELTLEGIKQFYI 240
I ++ E T++ I+Q ++
Sbjct: 208 IEIRMETATVKSIEQRFL 225
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
++F T+ + + E + A+HGD+ Q RE I+ QF+ G+ +L+ TD+ ARG
Sbjct: 249 IVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDILVATDVAARG 308
Query: 492 IDVQQV 509
+DV++V
Sbjct: 309 LDVERV 314
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/83 (36%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + LCD+ A+IFCN + V L ++ + F+V +HGDM Q ER + +F
Sbjct: 229 KKKKLCDMLRAEKDHTAIIFCNRKTTVRQLATTLEQQGFSVGQIHGDMSQPERGSELERF 288
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G VL+ +D+ ARG+DV+ +
Sbjct: 289 KNGQISVLVASDIAARGLDVKGI 311
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/90 (30%), Positives = 45/90 (50%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
++ ++ V+DEAD ML GF I + L Q +L SATMP + +++ F+ +P +
Sbjct: 145 SSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQTLLFSATMPPAIKKLADRFLSNPKQ 204
Query: 187 ILVQKEELTLEGIKQFYIAIELENGSWKLC 276
I + + I Q I + + KLC
Sbjct: 205 IEISRPATANTLIDQRLIEVSPRSKKKKLC 234
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/83 (38%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+E + + +IF T+R D + + R F V+A+HGD+ Q RE +R F
Sbjct: 341 KIEIVARILQARGRGLTMIFTRTKRAADRVAADLDFRGFAVAAVHGDLGQGARERALRAF 400
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
RTG L+ TD+ ARGIDV V
Sbjct: 401 RTGKIDTLVATDVAARGIDVSGV 423
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
++ VLDEAD ML GF D + + +L D Q +L SATMPD ++ +SR F+R PV I
Sbjct: 257 VRALVLDEADRMLDLGFLDDVERILAILPEDRQTMLFSATMPDPIVALSRRFLRRPVTI 315
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/75 (38%), Positives = 47/75 (62%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ FVLDEADEML GF + I + +L + Q L SAT+P +++E+++ FM + +
Sbjct: 144 VSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFLFSATIPSEIIELAKGFMHNEEILF 203
Query: 193 VQKEELTLEGIKQFY 237
+ K+E+T+ GI Y
Sbjct: 204 LSKDEVTVNGIDHNY 218
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/83 (31%), Positives = 44/83 (53%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
RE KL TL D +++IF T+ + + E++ MHGD+ Q +RE +
Sbjct: 223 RERKLRTLFSYIDKYKPEKSIIFSRTKAGANMIYEALINHGQDAVIMHGDLTQAQREKAL 282
Query: 432 RQFRTGSSRVLITTDLLARGIDV 500
+F+ R L+ T++ ARG+D+
Sbjct: 283 YRFK-NFGRFLVATNVAARGLDI 304
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/70 (40%), Positives = 47/70 (67%)
Frame = +3
Query: 300 IAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 479
+ Q +IF T++ + ++ L D+ S++ G +DQ ERE I+++F+ G ++VLI+TD+
Sbjct: 350 VGQVIIFVRTKQSTKDVHNALTLEDYVCSSIQGSLDQSEREKIIQEFKNGYTKVLISTDV 409
Query: 480 LARGIDVQQV 509
LARG D QV
Sbjct: 410 LARGFDQAQV 419
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADV---QVILLSATMPDDVLEVSRCFMR 174
N IK+ V DEAD ML+ GF+ + + + QV+L SAT + V + ++
Sbjct: 246 NDIKILVFDEADHMLAEDGFRSDSERIMRDIQRSAGGCQVLLFSATFNERVKDFVTRVIK 305
Query: 175 DPVRILVQKEELTLEGIKQFYIAI 246
D +I V+KEELTLE +KQ+ + +
Sbjct: 306 DGNQIFVKKEELTLEKVKQYKVQV 329
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/81 (34%), Positives = 51/81 (62%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N+I VLDEADEML+ GF + I + L + Q++L SATMP+++ +++ ++ DP
Sbjct: 194 NSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNKQMVLFSATMPNEIRNIAKKYLNDPAE 253
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
IL++ + + I Q ++ ++
Sbjct: 254 ILIKSVKKETQLISQKFLYVQ 274
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/86 (27%), Positives = 49/86 (56%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
R KL+ L + + L+ +IF T+ + E++ +V+ ++GD+ Q +RE +
Sbjct: 275 RHHKLDALKRILE-LNNEGVIIFVRTKLLTTSIAEALENLGHSVAVLNGDIPQNQRENTV 333
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
+ + G +L+ TD+ ARG+DV+++
Sbjct: 334 DRLKKGFIDILVATDVAARGLDVERI 359
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 64.5 bits (150), Expect = 2e-09
Identities = 29/83 (34%), Positives = 47/83 (56%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+E L D V+FC T+R + + ++ + A+HGDM Q +R+ M++F
Sbjct: 240 KIEALRRFLDYDEDMFGVVFCRTKRDTQNVADQLNNNGYATEALHGDMSQAQRDAAMKRF 299
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R + ++LI TD+ ARGIDV +
Sbjct: 300 RNKNLKLLIATDVAARGIDVDDI 322
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ +K VLDEADEML+ GFK+ I + + L SATM ++ + +M P
Sbjct: 156 DALKYMVLDEADEMLNMGFKEDIDFILSKSDTGRNIWLFSATMAREIKRIVDTYMVQPEE 215
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
+ + + + + I+ I ++
Sbjct: 216 VRINPKNIVNKNIEHQSIQLK 236
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 64.5 bits (150), Expect = 2e-09
Identities = 29/83 (34%), Positives = 53/83 (63%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K++ L L +T +IF T+ +T+++ + V+A++GDM Q +RE I+ QF
Sbjct: 235 KIDALDRLLETEETDGVIIFVKTKTSTIEVTDNLKALGYKVAAINGDMQQSQREYIVDQF 294
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R+ S +L+ TD++ARGID++++
Sbjct: 295 RSAKSDILVATDVVARGIDLERI 317
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ ++ VLDEADEML GF D + V +S + Q +L SAT+P D+ ++ ++R+P +
Sbjct: 151 DNLRALVLDEADEMLRMGFIDDVKFVLSHVSDECQRLLFSATIPTDIADIIEEYLRNPCK 210
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
I V+ + T + Q +I I+
Sbjct: 211 IQVKAKTKTANTVTQKFIVIK 231
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+K FVLDE D+ML + + + ++F++ + Q ++ SAT+ D+ V R FM+DP+ +
Sbjct: 189 VKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEV 248
Query: 190 LVQKE-ELTLEGIKQFYIAIELENGSWKL 273
V E +LTL G++Q+Y+ ++ + KL
Sbjct: 249 FVDDETKLTLHGLQQYYVKLKDSEKNRKL 277
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K L DL D L Q +IF + ++ L + + ++F A+H M Q ER +QF
Sbjct: 273 KNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQF 332
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ R+L+ T+L RG+D+++V
Sbjct: 333 KDFQRRILVATNLFGRGMDIERV 355
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L L Q ++F + D LT+ ++ + +HGD Q ERE + +F
Sbjct: 245 KTQALVALLKQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEF 304
Query: 441 RTGSSRVLITTDLLARGIDVQQVP 512
+ G+++VLI TDLLARGI ++ +P
Sbjct: 305 KNGTTQVLIATDLLARGIHIELLP 328
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N + VLDEAD +L GF Q+ + + Q ++ SAT DD+ ++ MR P +
Sbjct: 161 NRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTVMCSATFSDDLKLKAQQLMRAPTQ 220
Query: 187 ILVQKEELTLEGIKQ 231
+ E + +++
Sbjct: 221 VSANPENSINQAVQE 235
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
QA+IF NT+ K + + + V +HGDM Q ER +M Q R G +VL+ TD+ A
Sbjct: 247 QAIIFTNTKEKTEQTYHFLSYHNVEVGYLHGDMTQDERNHVMTQMRNGRFKVLVATDVAA 306
Query: 486 RGIDVQQV 509
RG+D+Q +
Sbjct: 307 RGLDIQSI 314
Score = 40.7 bits (91), Expect = 0.033
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLS--ADVQVILLSATMPDDVLE-VSRCFMRDPV 183
++ F+LDEAD ML GF++ + + S A Q +L SAT+ L+ V + DP
Sbjct: 146 VEYFILDEADRMLDMGFEEDVLTIANACSGKAKPQTLLFSATLQQRGLKHVIKQIQNDPE 205
Query: 184 RILVQKEELTLEGIKQFYI 240
I+V I+Q Y+
Sbjct: 206 EIVVDSFRGEHSNIEQHYM 224
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/86 (32%), Positives = 51/86 (59%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
++ KL L + + +IF T+R+VD +T +++ + ++HGD Q+ER+ ++
Sbjct: 353 KDQKLMKLLTEISAENETKTIIFVETKRRVDDITRNINRNGWRAVSIHGDKSQQERDYVL 412
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
FR G +L+ TD+ ARG+DV+ V
Sbjct: 413 NAFRNGRQGILVATDVAARGLDVEDV 438
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
VLDEAD ML GF+ QI + + D QV++ SAT P +V ++ F+ D ++I
Sbjct: 274 VLDEADRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKEVRNLAEEFLNDYIQI 328
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KLE L + + +IF T+ LTE + R F+ A++GD+ Q +RE I+ +
Sbjct: 239 KLEALTRILEVTVFDAMIIFVRTKTLTTELTEKLSARGFSADAINGDIQQNQRERIINDY 298
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G +LI TD+ ARG+DV+++
Sbjct: 299 KQGKIDILIATDIAARGLDVERI 321
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ +K FVLDEADEML GF D I + + + Q+ L SATMP+ + ++++ F+ P
Sbjct: 154 DNLKSFVLDEADEMLKMGFIDDIKWIMQRIPEQRQIALFSATMPNVIKKIAKQFLNQPKI 213
Query: 187 ILVQKEELTLEGIKQFYIAI 246
I ++ + T I Q Y +
Sbjct: 214 IKIKTKTETATTITQKYCMV 233
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 63.7 bits (148), Expect = 4e-09
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
+VIFC T+R + E + + A+HGD+ Q +R+++M+ FR ++L+ TD+ AR
Sbjct: 244 SVIFCRTKRDTQKVAEQLIEDGYNAGALHGDLSQNQRDLVMKSFRNNQIQMLVATDVAAR 303
Query: 489 GIDVQQV 509
GIDV +
Sbjct: 304 GIDVDDI 310
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV-QK 201
VLDEADEML+ GF + I ++ D L SATMP +V +++ FM DP+ I V K
Sbjct: 150 VLDEADEMLNMGFYEDITNILADTPEDKLTWLFSATMPREVARIAKEFMHDPLEITVGHK 209
Query: 202 EELTLEGIKQFYI 240
E ++Y+
Sbjct: 210 NEGAKNVSHEYYV 222
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 63.7 bits (148), Expect = 4e-09
Identities = 26/83 (31%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K E L D T+ + ++F T+R+ D++ + + +++HGD +QRERE + F
Sbjct: 517 KREQLLDFLKTIGNERTMVFVETKRQADFIATFLCQEELPTTSIHGDREQREREQALADF 576
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G +L+ T + ARG+D+ +V
Sbjct: 577 KAGKCPILVATSVAARGLDIPEV 599
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKM----LSADVQVILLSATMPDDVLEVSRCFMR 174
++ VLDEAD ML GF+ + + + Q +L SAT P D+ +++ F++
Sbjct: 430 LRYLVLDEADRMLDMGFEPDMRRLVASPGMPPKENRQTLLFSATYPQDIQKLAADFLK 487
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Frame = +1
Query: 13 IKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
++ F+LDE D+ML S + + ++FKM D QV++ SAT+ ++ V + FM+DP+ I
Sbjct: 191 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 250
Query: 190 LVQKE-ELTLEGIKQFYIAI-ELE 255
V E +LTL G+ Q YI + E+E
Sbjct: 251 YVDDEAKLTLHGLVQHYIKLSEME 274
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K L DL D L Q VIF + + L + + +F +H M Q ER + F
Sbjct: 275 KTRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSF 334
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G R+L+ TDL+ RGID+++V
Sbjct: 335 KEGHKRILVATDLVGRGIDIERV 357
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/79 (34%), Positives = 50/79 (63%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K+ V+DEAD ML GF+ Q+ D+ + + D Q IL+SAT+P + +++ + +PVRI+
Sbjct: 347 VKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRII 406
Query: 193 VQKEELTLEGIKQFYIAIE 249
++ L ++Q + +E
Sbjct: 407 TGEKNLPCANVRQIILWVE 425
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +3
Query: 297 SIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTD 476
S + ++F + + D L+ + L + +V ++HGD +QR+RE + F+TG R+LI TD
Sbjct: 486 STDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATD 545
Query: 477 LLARGIDVQQV 509
L +RG+DV V
Sbjct: 546 LASRGLDVHDV 556
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I VLDEAD+ML GF+ QI + + D Q ++ SAT P V +++ ++++P+ +
Sbjct: 390 ITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVY 449
Query: 193 VQKEEL-TLEGIKQFYIAIELENGSW 267
V +L + +KQ I + E W
Sbjct: 450 VGTLDLVAVSSVKQ-NIIVTTEEEKW 474
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ V+DEADEML+ GF +Q+ + K L + +L SAT+P D+ ++SR +M++P I
Sbjct: 145 LSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIE 204
Query: 193 VQKEELTLEGIKQFYIAIELEN 258
V+ LT I+ I + EN
Sbjct: 205 VKAAGLTTRNIEHAVIQVREEN 226
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/85 (34%), Positives = 47/85 (55%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E K L D+ T + +IFC T+ V+ LT+ + + +HG M Q +R +M
Sbjct: 225 ENKFSLLKDVLMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMN 284
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+F+ G R L+ TD+ ARGID++ +
Sbjct: 285 EFKRGEYRYLVATDVAARGIDIENI 309
>UniRef50_Q015D2 Cluster: DEAD/DEAH box helicase family protein /
pentatricopeptide; n=2; Ostreococcus|Rep: DEAD/DEAH box
helicase family protein / pentatricopeptide -
Ostreococcus tauri
Length = 518
Score = 63.3 bits (147), Expect = 5e-09
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +3
Query: 231 ILHCN*I--REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDM 404
I HC+ I R+ K++ L + +A+IFCN R++ + + R V +HG M
Sbjct: 325 ITHCSVIADRQRKVDELRRAIYATDVQRALIFCNFGRRLQDVQAKLGARGMRVGILHGGM 384
Query: 405 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVPA 515
D+ ER+ + FR G R L+ +DL ARG+DV A
Sbjct: 385 DKMERQKELAAFRRGDFRALVVSDLAARGLDVDDCDA 421
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 63.3 bits (147), Expect = 5e-09
Identities = 25/68 (36%), Positives = 44/68 (64%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+ +IF T+++VD +T ++ + + A+HGD Q+ER+ ++ FR G +L+ TD+ A
Sbjct: 406 KTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAA 465
Query: 486 RGIDVQQV 509
RG+DV V
Sbjct: 466 RGLDVDDV 473
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/55 (38%), Positives = 36/55 (65%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
VLDEAD ML GF+ QI + + + D QV++ SAT P +V +++ F+ + +++
Sbjct: 309 VLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQV 363
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 63.3 bits (147), Expect = 5e-09
Identities = 26/67 (38%), Positives = 49/67 (73%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ VLDEADEML+ GF D + ++ K +S + +++L SAT+PD ++++++ +MR+ I
Sbjct: 146 VSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRMLLFSATLPDSIMKLAKNYMREYDIIK 205
Query: 193 VQKEELT 213
V++++LT
Sbjct: 206 VKRQQLT 212
Score = 59.3 bits (137), Expect = 9e-08
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K E L + D +IFC T+ VD ++ ++ + + +HGDM Q +RE + +F
Sbjct: 228 KFELLSRIIDLEKEFYGLIFCKTKADVDEVSSRLNEKGYAAEGLHGDMTQAQREKTLDKF 287
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ VL+ TD+ ARGID+ +
Sbjct: 288 KGRKINVLVATDVAARGIDINDL 310
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 62.9 bits (146), Expect = 7e-09
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +3
Query: 294 LSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 473
+ + QA++F +T+R + +++ + F A+HGDM Q +R +++ R G +RVL+ T
Sbjct: 243 VEMVQAIVFASTKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGRTRVLVAT 302
Query: 474 DLLARGIDVQQV 509
D+ ARGIDV +
Sbjct: 303 DVAARGIDVASI 314
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++ VLDEAD ML GF D I + A+ Q +L SAT+ V ++R RD RI
Sbjct: 149 LEVLVLDEADRMLDMGFVDDIKAIAARCPAERQTLLFSATLDGVVGNLARELTRDAQRIE 208
Query: 193 VQ 198
++
Sbjct: 209 IE 210
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
++ VLDEAD ML GF +++ VF L A Q +L SAT DD+ ++ +R PV I
Sbjct: 149 VQTLVLDEADRMLDLGFARELNAVFAALPAQRQTLLFSATFSDDIRAMAATILRGPVNIS 208
Query: 193 VQKEELTLEGIKQFYIAIELEN 258
V T IKQ+ + ++ N
Sbjct: 209 VSPPNATASKIKQWVVTVDKRN 230
Score = 56.8 bits (131), Expect = 5e-07
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
A++F TR VD+L + + V +HGD Q R + +F+TG ++L+ TD+ AR
Sbjct: 247 ALVFVKTRNGVDYLAAMLDEAGYAVDTIHGDKPQPARLRALERFKTGEVQMLVATDVAAR 306
Query: 489 GIDVQQVP 512
G+D+ +P
Sbjct: 307 GLDIDDLP 314
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 62.9 bits (146), Expect = 7e-09
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
A+IF NT+R+V +L + + + + + M GD+ QR+RE + + R G R+L+ TD+ AR
Sbjct: 286 ALIFANTKREVSYLNKFLSNKGYDIDEMSGDLSQRDREEALDRLREGKLRLLVATDVAAR 345
Query: 489 GIDVQQV 509
GIDV +
Sbjct: 346 GIDVSDL 352
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/72 (38%), Positives = 46/72 (63%)
Frame = +1
Query: 4 ANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 183
A+T+++ VLDEADEMLS GF + D+ + + D + SATMP V V+R F+ DP
Sbjct: 185 ASTLRMLVLDEADEMLSMGFYPDMKDIVEHVPGDRVSYMYSATMPPKVRSVAREFLDDPG 244
Query: 184 RILVQKEELTLE 219
+ + +++++E
Sbjct: 245 FLSLSTDKVSVE 256
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K +TL L + +IFCNT+ +V L + + R +V +HGD+DQRER + F
Sbjct: 226 KFKTLNALIGSYKPDSLLIFCNTKAEVISLADRLQQRGHSVIDIHGDLDQRERNEAVILF 285
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
S R+++ TD+ +RG+D++ +
Sbjct: 286 SNRSKRIMVATDVASRGLDIKDI 308
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+IK VLDEAD ML GF ++I + + Q +L SAT P + +++ ++DP+ I
Sbjct: 146 SIKTLVLDEADRMLDMGFYEEIIKIGSNMPKQKQTLLFSATFPPKIESLAKALLKDPLTI 205
Query: 190 LV 195
V
Sbjct: 206 KV 207
>UniRef50_Q7RNB9 Cluster: Helicase conserved C-terminal domain,
putative; n=4; Plasmodium (Vinckeia)|Rep: Helicase
conserved C-terminal domain, putative - Plasmodium
yoelii yoelii
Length = 212
Score = 62.9 bits (146), Expect = 7e-09
Identities = 24/66 (36%), Positives = 42/66 (63%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
++F T+R D++T+++ L +HGD Q ER ++ F+TG S +LI TD+ +RG
Sbjct: 36 IVFVETKRSADFITKALRLEGMPALCIHGDKKQDERRWVLNDFKTGKSPILIATDVASRG 95
Query: 492 IDVQQV 509
+D++ V
Sbjct: 96 LDIKNV 101
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N I + +LDEAD ML GF+ Q+ D+ + D Q ILLSAT P++V ++S+ F DP+
Sbjct: 222 NKITMLILDEADRMLDMGFEPQVRDIVSTIREDRQTILLSATWPNEVQQLSKEFCYDPIL 281
Query: 187 ILVQK 201
+ + K
Sbjct: 282 VKIGK 286
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/84 (32%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAV-IFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 437
KL L ++ D L V IF T+++ + L++S+ + + ++HGD Q +R+ IM+Q
Sbjct: 302 KLHVLMNVLDDLIYTDKVLIFAETKKRCEDLSQSLTKQGYFCISLHGDKSQDQRDAIMKQ 361
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
F+ ++R++ TD+ +RG+DV+ +
Sbjct: 362 FKDSNTRLICATDIASRGLDVKDI 385
>UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 602
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L DL +L + +IF N++R + + + + ++MHGD +Q ERE MR F
Sbjct: 348 KKQALIDLIKSLPPTRTIIFVNSKRAAEEVDDFLFNLGMPCTSMHGDRNQLEREAAMRGF 407
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G +LI T + ARGIDV+ V
Sbjct: 408 RGGKWPILIATGVTARGIDVRNV 430
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+ L L+ L I Q++IFCN+ +V+ L + + ++ H M Q R + F
Sbjct: 261 KVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMQQAHRNRVFHDF 320
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G +R L+ +DLL RGID+Q V
Sbjct: 321 RNGMTRNLVCSDLLTRGIDIQAV 343
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N +FV+DEAD++LS F I + + QV+L SAT P V E M P
Sbjct: 178 NKCGVFVMDEADKLLSEDFMPVIEQTLALCPQERQVMLFSATFPWTVKEFKDQHMVQPYE 237
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
I + +ELTL+G+ Q+Y +E
Sbjct: 238 INLM-DELTLKGVTQYYAYVE 257
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/77 (37%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+I+LF+LDEAD++L G F++QI+ ++ L A Q++ +SAT P+ + +MRDP
Sbjct: 204 SIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTF 263
Query: 187 ILVQKEELTLEGIKQFY 237
+ + + +L G+KQ+Y
Sbjct: 264 VRLNSSDPSLIGLKQYY 280
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/85 (31%), Positives = 47/85 (55%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E K + L +L+ + QA++F N + L + + + F + G+M+Q +R M
Sbjct: 294 EEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMA 353
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+ + RVLI+TDL +RGID ++V
Sbjct: 354 KLKHFHCRVLISTDLTSRGIDAEKV 378
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/77 (37%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+I+LF+LDEAD++L G F++QI+ ++ L A Q++ +SAT P+ + +MRDP
Sbjct: 205 SIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTF 264
Query: 187 ILVQKEELTLEGIKQFY 237
+ + + +L G+KQ+Y
Sbjct: 265 VRLNPSDPSLIGLKQYY 281
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 62.5 bits (145), Expect = 9e-09
Identities = 24/63 (38%), Positives = 41/63 (65%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+IF T+R D L + + + T A+HGD+ QR+RE ++ FR + R+++ TD+ ARG
Sbjct: 242 IIFVKTKRSADQLAKMLKYENHTAEAIHGDLSQRQRERVILSFRKSNHRIMVATDVAARG 301
Query: 492 IDV 500
+D+
Sbjct: 302 LDI 304
Score = 59.7 bits (138), Expect = 7e-08
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I + VLDE D ML G K+Q+ ++ K L QV++ SATMP ++ VS+ ++ +PVRI
Sbjct: 144 IGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFSATMPKHIIAVSQKYLNNPVRIT 203
Query: 193 VQKEELTLEGIKQ 231
V IKQ
Sbjct: 204 VGATNKAAAEIKQ 216
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K FVLDEADEMLS GF D + + D Q L SATMP + + F+R PV +
Sbjct: 146 VKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTALFSATMPPSIRMLVNKFLRSPVTVT 205
Query: 193 VQKEELTLEGIKQ 231
V++ + T I Q
Sbjct: 206 VEQPKATPNKINQ 218
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 REW-KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVI 428
R W K L + + A+IF TRR LT + +V HGD+ Q+ RE +
Sbjct: 225 RHWTKARALQPILEMEDPETALIFVRTRRTAAELTSQLQAAGHSVDEYHGDLSQQARERL 284
Query: 429 MRQFRTGSSRVLITTDLLARGIDVQQV 509
+ +FR+ R ++ TD+ ARG+DV Q+
Sbjct: 285 LTRFRSRQVRWVVATDIAARGLDVDQL 311
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESM-HLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 482
QA+IFC T+R D L + H A+HGD+ QRER+ ++++ R G+ + L+ TD++
Sbjct: 286 QAIIFCRTKRGTDRLHRKLSHEYGSACGAIHGDLQQRERDRVLQKLRDGNLKFLVATDVV 345
Query: 483 ARGIDVQQV 509
RGID+ +
Sbjct: 346 GRGIDISTI 354
Score = 59.7 bits (138), Expect = 7e-08
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N + VLDEAD ML GF+ QI + + + Q +LLSAT+P V ++ +M +PV
Sbjct: 187 NNVWCVVLDEADRMLDIGFRPQIERIMRKCPRNRQTLLLSATLPPVVRRLAESYMHEPVV 246
Query: 187 ILVQKEELTLEGIKQFYIAI 246
I ++E+ ++ I+Q Y I
Sbjct: 247 IDCCRDEMAVDTIEQRYFTI 266
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/83 (34%), Positives = 47/83 (56%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
+ L DL + +A++F T+R+ D L + R A+HGD+ Q +RE + F
Sbjct: 232 RTRVLADLLTVYNPEKAIVFTRTKREADELANELIHRGIESEALHGDLAQSQRERALGAF 291
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R+G VL+ TD+ ARG+D+ +V
Sbjct: 292 RSGRVGVLVATDVAARGLDIPEV 314
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 183
+ I+ VLDEADEMLS GF D I + + A Q +L SAT+ D++ ++R ++R+PV
Sbjct: 147 SAIQYAVLDEADEMLSVGFADAIETILQQTPAARQTMLFSATLNDEIHRLARKYLREPV 205
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/85 (36%), Positives = 49/85 (57%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E K + L L +++ +A++F T+ D +T + +A+HG+ Q +RE +
Sbjct: 285 EEKKDKLAWLLADVAVERAIVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALD 344
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
QFR+G RVL+ TD+ ARGIDV V
Sbjct: 345 QFRSGRIRVLVATDIAARGIDVDNV 369
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/89 (32%), Positives = 45/89 (50%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ ++ VLDEAD+ML GF I + L Q ++ SATMP + ++ F+RDP
Sbjct: 203 DAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQRQAVMFSATMPKPIRALAGEFLRDPRE 262
Query: 187 ILVQKEELTLEGIKQFYIAIELENGSWKL 273
+ V E ++ I Q + + E KL
Sbjct: 263 VAVSVESKPVDRIDQQVLLLAPEEKKDKL 291
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/87 (34%), Positives = 49/87 (56%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I+ VLDEAD ML GF DQ+ + K L + +L SATMP ++ + + +M +PV I
Sbjct: 146 IRFLVLDEADRMLDMGFLDQVVRIVKTLPKERITLLFSATMPPEIHNICKRYMNNPVTIE 205
Query: 193 VQKEELTLEGIKQFYIAIELENGSWKL 273
++ + T++ I Q Y + + +L
Sbjct: 206 IESQTKTVDTIHQVYYRVNYNEKNTQL 232
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/66 (34%), Positives = 42/66 (63%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+IFCNT+ VD + + + ++ A+HGD+ Q +R ++QF+ G +L+ TD+ ARG
Sbjct: 245 MIFCNTKAAVDRVQSFLGKKGYSSRALHGDIPQSKRLNTIQQFKQGKFHILVATDVAARG 304
Query: 492 IDVQQV 509
I ++ +
Sbjct: 305 IHIEDL 310
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRD-FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 482
+ +IF T+++VD +T + LRD + +HGD QRERE + FR+G + +LI TD+
Sbjct: 336 KTIIFIETKKRVDDITRKV-LRDGWPAMCIHGDKSQREREYTLNSFRSGKNPILIATDVA 394
Query: 483 ARGIDVQQV 509
ARG+DV V
Sbjct: 395 ARGLDVDDV 403
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
VLDEAD ML GF+ QI + + + D Q ++ SAT PD V + + +++D ++I V
Sbjct: 239 VLDEADRMLDMGFEPQIRAIIEQIRPDHQTLMWSATWPDAVSRLVKDYLKDYIQINV 295
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/86 (33%), Positives = 54/86 (62%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
+E KL +L + ++ +IF T++KV+ L +++ + +++HGD Q ER+ ++
Sbjct: 462 KEGKLLSLLKEISSDVNSKIIIFVETKKKVEDLLKNIVRDGYGATSIHGDKSQSERDYVL 521
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
+ FR G S +L+ TD+ ARG+DV+ V
Sbjct: 522 QDFRHGKSTILVATDVAARGLDVEDV 547
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
VLDEAD ML GF+ QI + + + D QV++ SAT P +V ++ F+ D ++I
Sbjct: 383 VLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLHDYIQI 437
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 62.5 bits (145), Expect = 9e-09
Identities = 23/66 (34%), Positives = 43/66 (65%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+IFC+T+R D L + + + A+HGD +QRER+ I+ +R+ +L+ TD+ +RG
Sbjct: 578 LIFCDTKRNCDSLCKELRYHQYNALAIHGDKEQRERDRILSNYRSDRCNILVATDVASRG 637
Query: 492 IDVQQV 509
+D++ +
Sbjct: 638 LDIKNI 643
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR-DPVRILVQK 201
V+DEAD +L GF+ Q+ + ++ + Q++ +AT P+ V +++ F DPV+I + K
Sbjct: 480 VIDEADRLLDMGFEKQLKKIMTQVNRNKQLLFFTATWPEQVRKLAYQFSSFDPVKIQIGK 539
Query: 202 EELT 213
ELT
Sbjct: 540 SELT 543
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 62.5 bits (145), Expect = 9e-09
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +3
Query: 303 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 482
A ++F T++ D L + + F + +HGD Q+EREV +R F+TG + +L+ TD+
Sbjct: 406 ALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVA 465
Query: 483 ARGIDVQQV 509
ARG+D+ V
Sbjct: 466 ARGLDIPHV 474
Score = 36.7 bits (81), Expect = 0.53
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADV----QVILLSATMPDDVLEVSRCFMRDP 180
++ LDEAD ML GF+ QI + + + Q +L SAT P ++ ++ F+ +
Sbjct: 299 VRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNY 358
Query: 181 VRILV 195
+ + V
Sbjct: 359 IFLAV 363
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L L + A+IFCN +R VD LT+S+ F +HGD+ Q R + +F
Sbjct: 451 KRKALRHLLRQEKVQNALIFCNRKRDVDILTKSLVKHGFAAGPLHGDLAQSLRFSTLEKF 510
Query: 441 RTGSSRVLITTDLLARGIDV 500
+ GS ++L+ +D+ ARGID+
Sbjct: 511 KAGSLQLLVCSDVAARGIDI 530
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
++ V+DEAD ML GF + + +L + Q + SATM ++ ++ F+++P I V
Sbjct: 370 RILVIDEADRMLDMGFIPDVERIVSLLPHNRQTLFFSATMAPEIRRLADAFLQNPKEITV 429
Query: 196 QK 201
K
Sbjct: 430 AK 431
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Frame = +3
Query: 267 ETLCDLYDTLSIAQA---VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 437
E + D+ L QA +IFC T+ L + + F+ +A+ GDM Q+ER+ +MR
Sbjct: 231 EKVADIVTFLEKRQAQRGIIFCRTKAGAQNLAKQLVDEGFSAAALEGDMQQKERDKVMRA 290
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
F+ S + LI+TD+ ARGIDV+++
Sbjct: 291 FKNESLQYLISTDVSARGIDVREL 314
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLS-ADVQVILLSATMPDDVLEVSRCFM-RDPVR 186
+K +LDEADEMLS GFK ++ + K + +D + L SATMPD++ + + +M + R
Sbjct: 148 VKTVILDEADEMLSMGFKQDLNRILKFTTKSDRKTWLFSATMPDEIKRIVKTYMDANAPR 207
Query: 187 ILVQKEELTLEGIKQFYIAIELE 255
I + K L I+ + L+
Sbjct: 208 IEINKNTLVNANIRHQFAKTTLK 230
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 62.1 bits (144), Expect = 1e-08
Identities = 25/68 (36%), Positives = 43/68 (63%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+A+IFC T+ VD++ + + + VS ++G+MDQ R + + FR SR L+ TD+ A
Sbjct: 249 RAIIFCATKHHVDYIVKILESNNIIVSYIYGNMDQEARTMHLSTFRKNKSRALVVTDIAA 308
Query: 486 RGIDVQQV 509
RG+D+ +
Sbjct: 309 RGVDIPMI 316
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/78 (26%), Positives = 42/78 (53%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K+ +LDEAD + G QI + + + + Q +L+SATMP + S+ + +P I
Sbjct: 150 VKIIILDEADRLFEMGLASQIEKILESIPKNRQCVLVSATMPTALASFSKVMLNEPEVIQ 209
Query: 193 VQKEELTLEGIKQFYIAI 246
+ + + E +K ++ +
Sbjct: 210 IDSDYILSETLKLTFLFV 227
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
H ++I++ +LDEAD ML F++Q+ ++ +M S Q +L SATM D+V +++ +++P
Sbjct: 361 HLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNP 420
Query: 181 VRILVQKEELTLEGIKQFYIAI 246
VRI V ++Q +I I
Sbjct: 421 VRIFVNSNTDVAPFLRQEFIRI 442
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/79 (25%), Positives = 41/79 (51%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
++F T+++ + + L V +HG++ Q +R +R+F+ +L+ TD+ ARG
Sbjct: 467 MLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARG 526
Query: 492 IDVQQVPASSTMICHPTVK 548
+D++ V T+K
Sbjct: 527 LDIEGVKTVINFTMPNTIK 545
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+ L L+ L I Q++IFCN+ ++V+ L + + ++ +H M Q R + F
Sbjct: 341 KVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDF 400
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G R L+ TDL RGID+Q V
Sbjct: 401 RNGLCRNLVCTDLFTRGIDIQAV 423
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
V +AD++LS+ F + D+ L+ + Q++L SAT P V + ++ P I + E
Sbjct: 264 VSPQADKLLSQDFVALVEDIISFLAKNRQILLYSATFPISVQKFMAKHLQKPYEINLM-E 322
Query: 205 ELTLEGIKQFY 237
ELTL+GI Q+Y
Sbjct: 323 ELTLKGITQYY 333
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Frame = +3
Query: 282 LYDTLSIAQ---AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGS 452
+Y L+I A++F NT+++VD +T+ + + V+ +HGD+ RER+ +MRQ +
Sbjct: 234 IYQLLTIGHPYLAIVFANTKQRVDEITDYLKDQGLKVAKIHGDITPRERKRVMRQVQNLD 293
Query: 453 SRVLITTDLLARGIDVQQV 509
+ ++ TDL ARGID++ V
Sbjct: 294 YQYVVATDLAARGIDIEGV 312
Score = 41.9 bits (94), Expect = 0.014
Identities = 22/86 (25%), Positives = 47/86 (54%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+T FV+DEAD L GF ++ + L +Q+++ SAT+P+ + + ++ +PV
Sbjct: 146 HTAFAFVVDEADMTLDMGFLAEVDQIAGRLPEKLQMLVFSATIPEKLRPFLKKYLENPVI 205
Query: 187 ILVQKEELTLEGIKQFYIAIELENGS 264
++ + + E I + I+ + +N +
Sbjct: 206 EHIKPKAVISETIDNWLISTKGKNSN 231
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ FVLDEAD+ML GF +++ + + L Q +L SAT P +L ++ M++P+ +
Sbjct: 150 VDFFVLDEADKMLDFGFAEELELILEALGQKRQNLLFSATYPPKMLFIASKIMQNPIEVS 209
Query: 193 VQKEELTLEGIKQFYIAIELEN 258
V+ EE T+E + Q I + EN
Sbjct: 210 VEDEEPTVESVVQRAILVSREN 231
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/86 (25%), Positives = 44/86 (51%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
RE + L L + ++F +++R D + F+ + HGD+ Q +R +
Sbjct: 229 RENRAPLLRHLLKSEKYELVIVFMSSKRAADNIAAKFRKHGFSADSFHGDLHQEDRNYTL 288
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
+F+T ++L TDL++RG+D+ +
Sbjct: 289 EEFKTKKLQILFATDLVSRGLDINDI 314
>UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;
n=1; uncultured marine bacterium 66A03|Rep: Putative
cold-shock dead-box protein A - uncultured marine
bacterium 66A03
Length = 659
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = +3
Query: 300 IAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 479
++ A++FCNTR V L + R F+V A+ G++ Q+ER ++ R G + V + TD+
Sbjct: 244 VSGAIVFCNTRAAVTHLASRLTNRGFSVVALSGELSQKERNFALQSMRAGKANVCVATDV 303
Query: 480 LARGIDV 500
ARGID+
Sbjct: 304 AARGIDL 310
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/65 (35%), Positives = 41/65 (63%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
IK VLDEADEML GF++ + + + + +L SAT+P ++++++ + +D VRI
Sbjct: 149 IKAVVLDEADEMLDMGFREDLTFILGKAPVERRTLLFSATVPTQIVKLAKTYQKDSVRIS 208
Query: 193 VQKEE 207
V ++
Sbjct: 209 VSSKK 213
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/69 (36%), Positives = 44/69 (63%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
Q ++F T+++VD LT+ + +A+HG+ QRER ++ +F G VL+ TD+ A
Sbjct: 248 QTLVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAGDLHVLVATDVAA 307
Query: 486 RGIDVQQVP 512
RG+D++ +P
Sbjct: 308 RGLDIESLP 316
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
++ VLDEAD ML GF D I + + D Q +L +AT + V ++ ++ +P +I
Sbjct: 151 LEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQTLLFTATADESVEVLAEFYLNNPTKIK 210
Query: 193 VQKEELTLEGIKQFYIAIE 249
V T + I+QF ++
Sbjct: 211 VTPRNSTAKQIRQFAYQVD 229
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+E + + +IF T+R + + + R F V A+HGD+ Q RE ++ F
Sbjct: 247 KVEMVSRILQAEGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQGAREKALKSF 306
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
RTG VL+ TD+ ARGID+ +
Sbjct: 307 RTGEVDVLVATDVAARGIDIDDI 329
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/65 (38%), Positives = 36/65 (55%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ + VLDEADEML GF I + + Q +L SATMPD ++ ++R FM P I
Sbjct: 163 LSVLVLDEADEMLDLGFLPDIERILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIR 222
Query: 193 VQKEE 207
+ +
Sbjct: 223 AESPQ 227
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N + VLDEAD+ML GF+ QI + +S D Q ++ SAT P ++ +++ F+ DPV
Sbjct: 271 NRVNFLVLDEADQMLDMGFEPQIRKIIGHISKDRQTMMFSATWPKEIQQLAADFLVDPVH 330
Query: 187 ILVQKEELTL-EGIKQ 231
+++ ++LT IKQ
Sbjct: 331 MIIGNKDLTTNSNIKQ 346
Score = 59.7 bits (138), Expect = 7e-08
Identities = 23/66 (34%), Positives = 43/66 (65%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+IF T+R D L E+++++ F ++HGD Q +R+ ++ +FR+ +L+ TD+ ARG
Sbjct: 373 IIFTKTKRTTDDLQENLNMKGFQAYSLHGDKAQNQRDFVLGKFRSCKKGILVATDVAARG 432
Query: 492 IDVQQV 509
+DV +
Sbjct: 433 LDVNDI 438
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++ VLDEADEML GF + + + D L SATMP + +V+R ++DPV++
Sbjct: 189 VRMLVLDEADEMLRMGFAEDVETIASSAPDDRLTALFSATMPAAIEKVAREHLKDPVKVA 248
Query: 193 VQKEELTLEGIKQFYIAI 246
V E T++ I Q Y +
Sbjct: 249 VSTESSTVDTIHQTYAVV 266
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/67 (35%), Positives = 43/67 (64%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
A++F TR V+ ++ + R F + + GD+ Q ERE ++ + + GS VL+ TD+ AR
Sbjct: 296 AIVFVRTRADVEEVSLELSSRGFRAAGISGDVAQTERERMVERLKNGSLDVLVATDVAAR 355
Query: 489 GIDVQQV 509
G+DV+++
Sbjct: 356 GLDVERI 362
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
+ E L L D +V+FC T+R + E + ++ +A+HGD+ Q +R+ +M+ F
Sbjct: 229 RYEALKRLADANPDIFSVVFCRTKRDTQAVAEKLVEDGYSAAALHGDLSQAQRDGVMKAF 288
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R ++L+ TD+ ARGIDV V
Sbjct: 289 RGRQIQMLVATDVAARGIDVDNV 311
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I +LDEADEML+ GF + I ++ + L SATMP +V + + FM DP+ I
Sbjct: 147 INYCILDEADEMLNMGFYEDIVNILSTTPDEKNTWLFSATMPAEVARIGKQFMTDPIEIT 206
Query: 193 V 195
V
Sbjct: 207 V 207
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/90 (34%), Positives = 50/90 (55%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
++++ VLDEADEML+ GF + + V K D V++ SATMP + +++ +M + +
Sbjct: 144 DSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVLMFSATMPPRLKKIAESYMHNSIT 203
Query: 187 ILVQKEELTLEGIKQFYIAIELENGSWKLC 276
I + E +T+E I Q EN LC
Sbjct: 204 IKAKSETMTMETIDQVVYEAYPENKFAALC 233
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E K LC + D +IFC T+ +V+ ++ + + +HGD+ Q RE +++
Sbjct: 226 ENKFAALCRIMDLEKDFYGIIFCRTKVEVEKVSAGLANEGYAADYIHGDVAQESRERLLK 285
Query: 435 QFRTGSSRVLITTDLLARGIDV 500
+FR + +LI TD+ ARGIDV
Sbjct: 286 RFRNRNISLLIATDVAARGIDV 307
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K L DL+ ++ + ++F T+R D L++ ++ +HG+ Q R + QF
Sbjct: 281 KFGMLADLFQNRAMDKVIVFTETKRLADRLSKKLNQAGVKSGLIHGNKSQNFRNKTIEQF 340
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
++G +RVL+ TD+ ARGIDV V
Sbjct: 341 KSGETRVLVATDVAARGIDVADV 363
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N +K VLDE D ML GF + + + ++ Q +L SAT+ + + + +++PV
Sbjct: 196 NQVKTLVLDEFDRMLDMGFVNDVKKLVGGMTQREQTMLFSATLEPNQKNLIQSLLKNPVE 255
Query: 187 ILVQKEELTLEGIKQFYIAI 246
+ + T E I+Q I +
Sbjct: 256 VKINTGVSTNENIEQGIIRV 275
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/71 (38%), Positives = 44/71 (61%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
H ++++ VLDEAD ML GF QI + + + Q ++ SAT P +V ++ F++DP
Sbjct: 253 HLSSVQYLVLDEADRMLDMGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDP 312
Query: 181 VRILVQKEELT 213
++I V +ELT
Sbjct: 313 IKITVGSQELT 323
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVS-AMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
++FCN + K D + + S +H DQR RE ++ FR R+LI TD+ AR
Sbjct: 364 IVFCNEKYKCDDFQHYLSTQKNVKSIVLHSGKDQRMRESGLKLFRDHRIRILIATDVAAR 423
Query: 489 GIDVQQVPA 515
G+D+ V A
Sbjct: 424 GLDIPSVKA 432
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = +3
Query: 264 LETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFR 443
+ L L ++ + +IFC+T++ D L +++ A+HGD Q ER+ +M FR
Sbjct: 382 ISLLLYLLKDIAHKKILIFCSTKKGCDQLQKTLDREGIRCLALHGDKKQTERDYVMSHFR 441
Query: 444 TGSSRVLITTDLLARGIDVQQV 509
G S LI TD+ +RG+D++ +
Sbjct: 442 NGRSTALIATDVASRGLDIKDI 463
Score = 49.2 bits (112), Expect = 9e-05
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR-DPVRI 189
+ VLDEAD ML GF+ QI + + Q +L SAT P +V +++ F + +PV I
Sbjct: 279 VSFLVLDEADRMLDMGFEPQIRKIVDQIRPQRQTMLFSATWPKEVQKLALDFCKQEPVHI 338
Query: 190 LVQKEELT 213
+ ELT
Sbjct: 339 QIGNVELT 346
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
+ E LC L ++FC T+R L + F A+HGD+ Q +RE ++R F
Sbjct: 226 RFEALCRLLKNKEF-YGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQREKVIRLF 284
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ R+LI TD+++RGIDV +
Sbjct: 285 KQKKIRILIATDVMSRGIDVNDL 307
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/55 (40%), Positives = 37/55 (67%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 177
+K F+LDEADEML+ GF + + + D +++L SATMP ++L +++ +M D
Sbjct: 148 VKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLFSATMPREILNLAKKYMGD 202
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/83 (31%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K E L ++ + + ++F T++K D++ + + +++HGD +QRERE + F
Sbjct: 527 KREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDF 586
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G VL+ T + ARG+D++ V
Sbjct: 587 RFGKCPVLVATSVAARGLDIENV 609
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFK---MLSADV-QVILLSATMPDDVLEVSRCFMR 174
IK VLDEAD ML GF ++ + M S + Q ++ SAT P+++ ++ F++
Sbjct: 440 IKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLK 497
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 61.3 bits (142), Expect = 2e-08
Identities = 23/69 (33%), Positives = 48/69 (69%)
Frame = +3
Query: 303 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 482
+ V+FCNT++ + ++++ + ++HGD++QR+R+ + +F GS+RVL+ TD+
Sbjct: 242 SSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVA 301
Query: 483 ARGIDVQQV 509
ARG+D++ +
Sbjct: 302 ARGLDIKSL 310
Score = 56.0 bits (129), Expect = 8e-07
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ + V+DEAD ML GF D I DV + A Q +L SAT P+ + +S RDP+
Sbjct: 145 DALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLA 204
Query: 187 ILVQKEELTLEGIKQFY 237
I + + +QFY
Sbjct: 205 IEIDSTDALPPIEQQFY 221
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+ ++FC T+R + L S ++ T MHGD+ Q +REV ++ FR G + L+TTD+ A
Sbjct: 355 RCMVFCETKRDANELAMSSDVKQET-QVMHGDIPQTQREVTLKGFREGKFQCLVTTDVAA 413
Query: 486 RGIDVQQV 509
RG+D+ +V
Sbjct: 414 RGLDIPEV 421
Score = 34.3 bits (75), Expect = 2.8
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDV----FKMLSA--DVQVILLSATMPDDVLEVSRCFMR 174
+K VLDE D ML GF + + ++ +K A + Q +L SAT+P V + + +MR
Sbjct: 247 LKHVVLDEVDRMLDMGFAESVEEILGAAYKTEEAPNNPQTLLFSATVPPWVYQTAVKYMR 306
Query: 175 DPVR 186
++
Sbjct: 307 KDLK 310
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/95 (30%), Positives = 53/95 (55%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N I++ +LDEAD ML F++Q+ ++ ++ S Q +L SATM ++V +++ +R+PVR
Sbjct: 326 NCIEVLILDEADRMLDEYFEEQMKEIIRLCSHQRQTLLFSATMSEEVKDLASVSLRNPVR 385
Query: 187 ILVQKEELTLEGIKQFYIAIELENGSWKLCVTCMI 291
I V ++Q ++ I + V C +
Sbjct: 386 IFVNSNTDVAPFLRQEFVRIRPNREGDREAVACAL 420
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
++F T+++ + + L V +HG++ Q +R +R+F+ +L+ TD+ ARG
Sbjct: 430 MLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARG 489
Query: 492 IDVQQVPASSTMICHPTVK 548
+D+ V + TVK
Sbjct: 490 LDIDGVKTVINLTMPGTVK 508
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/85 (35%), Positives = 48/85 (56%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E KL TL D +VIF T+R+VD L ++ F+ + GDM Q++R ++
Sbjct: 224 EEKLITLVKFLDFKKPTASVIFGRTKRRVDELASALQELGFSAVGIQGDMVQKDRTSVLN 283
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+F+ +++ TD++ARGIDV V
Sbjct: 284 RFKDQKVNIIVATDVMARGIDVSHV 308
Score = 39.5 bits (88), Expect = 0.075
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
IK F LDEADE+L GF ++I + L Q +AT + ++S+ + I
Sbjct: 144 IKTFTLDEADELLKIGFYNEIIKIMNKLPKKRQNFFFTATFDEKTKKLSQEITNEAKMIS 203
Query: 193 VQKEELTLEGIKQFYIAIELE 255
+ T E I Q ++ + E
Sbjct: 204 MSSGLETTEKIDQNFVVVSEE 224
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/65 (38%), Positives = 44/65 (67%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+A+IF NTR D + + +D +HG+ DQ++R++ + +F+ GSS+VL+ TD+ A
Sbjct: 427 KAIIFTNTRVLADRIYGHLVAKDVKAFVLHGEKDQKDRKLAIERFKQGSSKVLVATDVAA 486
Query: 486 RGIDV 500
RG+D+
Sbjct: 487 RGLDI 491
Score = 39.5 bits (88), Expect = 0.075
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVL-EVSRCFMRDPVRI 189
+++ +LDEAD ML GF + + + K Q +L SAT L ++ ++DP +
Sbjct: 328 VQVMILDEADRMLDMGFAEDMERLCKECENREQTLLFSATTGGAALRDIIGKVLKDPEHL 387
Query: 190 LVQKEELTLEGIKQFYIAIE 249
++ EG +Q I +
Sbjct: 388 MLNSVSQLAEGTRQQVITAD 407
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/83 (36%), Positives = 44/83 (53%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+E + + + +IF T+R + E + R F +A+HGD+ Q RE +R F
Sbjct: 275 KIEVVARILQARGRGRTIIFTKTKRTAAKVAEELVDRGFAAAAIHGDLGQGAREQALRAF 334
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R VL+ TD+ ARGIDV V
Sbjct: 335 RNNKVDVLVATDVAARGIDVDDV 357
Score = 50.8 bits (116), Expect = 3e-05
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K+ +LDEADEML GF + + A Q +L SATMP V+ ++R +M P I
Sbjct: 190 VKIVILDEADEMLDLGFLPDVETLIAGTPAVRQTLLFSATMPGPVIAMARRYMTQPTHIR 249
Query: 193 V---QKEELTLEGIKQ 231
E LT I+Q
Sbjct: 250 AADPDDEGLTKRDIRQ 265
>UniRef50_Q2H6N4 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 512
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
A+IFCN D+L + L D V+A+H + QR+R + +FR ++R+L+ TD+ AR
Sbjct: 339 AIIFCNRTSTADYLHHLLRLLDHRVTALHSRLPQRQRIDNLGRFRASAARILVATDVAAR 398
Query: 489 GIDVQQV 509
G+D+ +V
Sbjct: 399 GLDIPEV 405
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/83 (30%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K +T + D A++F T+R+VD LT ++ + + +HGD+ Q +R ++++F
Sbjct: 227 KFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKF 286
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ +L+ TD+ ARG+D+ V
Sbjct: 287 KNDQINILVATDVAARGLDISGV 309
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVF-KMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
I +LDEADEM++ GF D + + K+ + Q +L SATMP + + + FM+ P I
Sbjct: 144 IHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKII 203
Query: 190 LVQKEELTLEGIKQFY-IAIELE 255
E++ I++FY I ELE
Sbjct: 204 KTMNNEMSDPQIEEFYTIVKELE 226
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/84 (34%), Positives = 48/84 (57%)
Frame = +3
Query: 258 WKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 437
W LE L + D ++F + + VD + + L F V+A+HGD DQ R +++
Sbjct: 462 WLLEKLPGMIDE---GDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQK 518
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
F++G VLI TD+ ARG+D++ +
Sbjct: 519 FKSGVHHVLIATDVAARGLDIKSL 542
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
VLDEAD M GF+ Q+ + + D Q +L SATMP V +++R + DP+R+ V +
Sbjct: 380 VLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEV 439
Query: 205 ELTLEGIKQ 231
+ E I Q
Sbjct: 440 GMANEDITQ 448
>UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:
RNA helicase II/Gu - Xenopus laevis (African clawed
frog)
Length = 800
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Frame = +3
Query: 234 LHCN*IREWKLETLCDLYDTLSIA--QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 407
+ CN R K L D+ S + + +IFC+++ + L+ + + +HGD+
Sbjct: 451 IECN--RSQKAAVLGDIVQVYSGSHGKTIIFCDSKLQAHELSTNCGSLKQSAKPLHGDLQ 508
Query: 408 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
Q+EREV+++ FR G+ VLI T++ ARG+D+ +V
Sbjct: 509 QKEREVVLKGFRQGTFEVLIATNVAARGLDIPEV 542
Score = 37.9 bits (84), Expect = 0.23
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKML-----SADVQVILLSATMPDDVLEVSRCFMRD 177
+K VLDE D M GF +Q+ ++ + + Q +L SAT PD + V++ +MR
Sbjct: 368 LKHVVLDEVDMMFDVGFSEQVEEILSVRYKPDPEENPQTLLFSATCPDWMYNVAKKYMRK 427
Query: 178 PVRILVQKEELTLEGIKQFYIAIELEN 258
Q E++ L G + AI +E+
Sbjct: 428 ------QYEKVDLVGHRSQKAAITVEH 448
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
++ VLDE+DEML GF D I ++FK L Q +L SATMP+ + ++ + +P + +
Sbjct: 188 QIVVLDESDEMLDMGFLDDIEEIFKFLPNTRQTLLFSATMPEPIKALAMKILNEPAFVKI 247
Query: 196 QKEELTLEGIKQFYIAI 246
++T + I+Q Y I
Sbjct: 248 TPTDVTNQDIEQQYYII 264
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/81 (32%), Positives = 47/81 (58%)
Frame = +3
Query: 267 ETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRT 446
E + L +T + +++IF +++ D L + R F A+HGDM+QR+R ++ FR
Sbjct: 271 EAIVRLIETQNPTKSIIFTRMKKEADALAIRLANRGFKAIALHGDMEQRDRREAIKAFRE 330
Query: 447 GSSRVLITTDLLARGIDVQQV 509
+L+ TD+ +RG+D+ V
Sbjct: 331 NKIEILVATDVASRGLDISDV 351
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
VLDEADEML GF+D+++ + + +L SATMP +V ++ +M+DP+ I+V +
Sbjct: 151 VLDEADEMLQMGFQDELNAILAVTPDSKNTLLFSATMPREVAAIAANYMKDPLEIIVGRR 210
Query: 205 ELTLEGIKQFYIAI 246
E + Y +
Sbjct: 211 NAGAENVDHIYYVV 224
Score = 60.1 bits (139), Expect = 5e-08
Identities = 24/67 (35%), Positives = 44/67 (65%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
A+IFC TR + + + + ++ A+HGD+ Q +R+ +M +FR+ + R+L+ TD+ AR
Sbjct: 245 AIIFCRTRLETREIVDKLIEDGYSADALHGDLSQSQRDHVMHKFRSRNIRMLVATDVAAR 304
Query: 489 GIDVQQV 509
G+DV +
Sbjct: 305 GLDVNDL 311
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDV-LEVSRCFMRDPVRI 189
+K VLDEADEM++ GFK +I ++ K + +L +ATMP DV L + + D I
Sbjct: 45 LKYLVLDEADEMINMGFKAEIDEILKSCKPAITKLLFTATMPKDVKLLIEEYLVADASEI 104
Query: 190 LVQKEELTLEGIKQFYIAIE 249
+ KEEL E I+ + + E
Sbjct: 105 RINKEELVNEKIQHYLLMFE 124
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+ ++FC T+ L + + D A+HG+++Q RE ++R F+ +L+ TD+ A
Sbjct: 143 RGILFCRTKIAAKRLAKQLAGFDVVAGAIHGNLNQESREKVLRGFKKNRINLLVATDIAA 202
Query: 486 RGIDVQQV 509
RGIDV+ +
Sbjct: 203 RGIDVKDL 210
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L +L +A++FC T+R + +T+ + + V +HGDM Q R + F
Sbjct: 231 KFDMLVELLKREQPQKAIVFCRTKRGTERITQRLSKKTKLVHCIHGDMQQGARNRALSDF 290
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ RVL+ TD++ RGID+ V
Sbjct: 291 KASKFRVLVATDVVGRGIDISDV 313
Score = 56.0 bits (129), Expect = 8e-07
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
++ VLDEAD ML GF+ I + + + Q +LLSAT+P + ++++ +MR+P ++
Sbjct: 149 LRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLLSATVPPTIEKLAQRYMRNPEKVD 208
Query: 193 VQKEELTLEGIKQFYIAIE 249
++ E I+Q Y ++
Sbjct: 209 FSPTNISAETIEQRYFTVD 227
>UniRef50_Q9N341 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 728
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/73 (32%), Positives = 45/73 (61%)
Frame = +3
Query: 294 LSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 473
L + +A++FC T+++ D + + + + + +HGD ER+ + F+ G R L+ +
Sbjct: 503 LQMDKAIVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCS 562
Query: 474 DLLARGIDVQQVP 512
D++ARG+DVQ VP
Sbjct: 563 DVVARGLDVQGVP 575
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 60.5 bits (140), Expect = 4e-08
Identities = 22/66 (33%), Positives = 42/66 (63%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+IFC+T+R D L + + + ++HGD QRER+ I+ ++T +L+ TD+ +RG
Sbjct: 378 LIFCDTKRNCDNLGKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATDVASRG 437
Query: 492 IDVQQV 509
+D++ +
Sbjct: 438 LDIKNI 443
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR-DPVRILVQK 201
V+DEAD +L GF+ Q+ + ++ + Q++ L+AT P+ V +++ F DPV+I + K
Sbjct: 280 VIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATWPEQVRKLAYDFCAYDPVKIQIGK 339
Query: 202 EELT 213
ELT
Sbjct: 340 NELT 343
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K E L ++ + + ++F T+R D+L + + +++HGD QRERE + F
Sbjct: 510 KREKLVEILNQAGTDRTLVFLETKRSADFLAAYLSQEQYPATSIHGDRLQREREEALLDF 569
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+TG + +LI T + ARG+D+ V
Sbjct: 570 KTGRAPILIATSVAARGLDIPGV 592
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDV---FKM-LSADVQVILLSATMPDDVLEVSRCFMRDP 180
+K +LDEAD ML GF+ +I + F M Q ++ SAT ++ ++++ F+ +
Sbjct: 424 VKYLILDEADRMLDMGFEPEIRKLVTTFDMPEKGQRQTLMFSATFAAEIQQLAKEFLSEY 483
Query: 181 VRILV 195
V + V
Sbjct: 484 VFVTV 488
>UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n=2;
Dugesia japonica|Rep: Nucleolar RNA helicase II/Gu
protein - Dugesia japonica (Planarian)
Length = 627
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +3
Query: 303 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 482
A+ +IFC ++ D L ++ +HGD+ Q +RE+++++FR G VL+TT++
Sbjct: 301 ARCIIFCERKKDADELASHSAMKS-DCHVLHGDVPQEKRELVLKKFREGKYSVLVTTNVA 359
Query: 483 ARGIDVQQVPASSTMICHP 539
ARG+DV + + CHP
Sbjct: 360 ARGLDVPDI--DLVIQCHP 376
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKML------SADVQVILLSATMPDDVLEVSRCFMR 174
I+ +LDE D ML GF D + ++ + Q +L SATMP+ + + + +++
Sbjct: 193 IEYVILDEVDRMLDMGFSDIVEEILSYIYPSETDKKGPQTLLFSATMPNWIHNIVKKYLK 252
Query: 175 -DPVRILVQKE 204
D +++ + E
Sbjct: 253 PDAIKVCLIDE 263
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/87 (34%), Positives = 47/87 (54%)
Frame = +3
Query: 249 IREWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVI 428
+ E K E +L D L + +IFC + L + + +HGD+ Q ER+ I
Sbjct: 659 VYENKFEKFAELTDRLKGQKLLIFCQKKLDTQKLEYRLSIHGLKARYLHGDLKQAERDQI 718
Query: 429 MRQFRTGSSRVLITTDLLARGIDVQQV 509
M +F++G+ LITT+L +RG+DV V
Sbjct: 719 MVEFKSGAINCLITTNLASRGLDVSDV 745
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM-RDPV 183
N+I VLDEAD ML GF+DQI + + D Q + SAT P++V ++ +DP+
Sbjct: 578 NSITQVVLDEADRMLDMGFEDQITQILSAVRDDRQTLFFSATWPNEVQRLANSLCNQDPI 637
Query: 184 RILVQKEELTLEGIKQFYIAIELEN 258
I + ++ L++ Q + I EN
Sbjct: 638 MIQLGEQGLSVNKNIQQEVIIVYEN 662
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAV-IFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 437
KL+TL D+ D L I V IF TR + L+ M + A+HG+ Q +R+ IM
Sbjct: 336 KLQTLLDILDQLKINDKVLIFAETRISCEQLSVDMTQEGYYAVALHGNKTQGQRDSIMEC 395
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
++ G +++L TDL +RG+DV +
Sbjct: 396 YKKGDTKLLCATDLASRGLDVSDI 419
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF-MRDPVRI 189
+ V+DEAD +L GF+D + + + D Q + SAT P V +S F DP+ +
Sbjct: 252 VTYLVIDEADRLLDMGFEDDVRFIVQRTRQDRQTVFFSATWPKAVRNLSLDFCAEDPIYV 311
Query: 190 LVQKEELTL 216
V + LT+
Sbjct: 312 QVGRSNLTV 320
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+K FVLDE D+ML + + + ++F+ QV++ SAT+ D+ V + FM+DP+ +
Sbjct: 187 LKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEV 246
Query: 190 LVQKE-ELTLEGIKQFYIAIELENGSWKL 273
V E +LTL G++Q Y+ ++ + KL
Sbjct: 247 YVDDEAKLTLHGLQQHYVNLKENEKNKKL 275
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/83 (31%), Positives = 46/83 (55%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L +L D L Q VIF + ++ L++ + ++F +H M Q ER +QF
Sbjct: 271 KNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQF 330
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ R+L+ T+L RG+D+++V
Sbjct: 331 KDFQKRILVATNLFGRGMDIERV 353
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/80 (32%), Positives = 49/80 (61%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
++E ++ ++ + ++F T+ VD+L + F VS ++G +DQ R++ ++ F
Sbjct: 360 EMERAVNMKESPTKHSTIVFAATKHHVDYLYSLLREAGFAVSYVYGSLDQTARKIQVQNF 419
Query: 441 RTGSSRVLITTDLLARGIDV 500
RTG S +L+ TD+ ARGID+
Sbjct: 420 RTGISNILVVTDVAARGIDI 439
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/81 (27%), Positives = 44/81 (54%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
++IK V DEAD + GF Q+ ++ L + Q +L SAT+P ++E +R ++DP
Sbjct: 234 SSIKYVVFDEADRLFEMGFAAQLTEILHGLPSTRQTLLFSATLPKSLVEFARAGLQDPTL 293
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
+ + E ++ + +++
Sbjct: 294 VRLDTESKISPDLQNAFFSVK 314
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+++ VLDEAD ML GF + I + L Q + SATMP D+ E++ +RDP R+
Sbjct: 163 SVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQTLFFSATMPKDIAELADSMLRDPARV 222
Query: 190 LVQKEELTLEGIKQFYIAIE 249
V T E I Q + ++
Sbjct: 223 AVTPVSSTAERINQRILQVD 242
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +3
Query: 300 IAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 479
I +A++F T+ D + +++ SA+HG+ Q RE + QFR+G R L+ TD+
Sbjct: 259 INRALVFTRTKHGADKVVKTLEKAGIAASAIHGNKSQNHRERTLAQFRSGDIRTLVATDI 318
Query: 480 LARGIDVQQV 509
ARGIDV +
Sbjct: 319 AARGIDVDGI 328
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+AV F N ++D +TE + R +A+H + ++ERE MR FR G +L+ TD+ A
Sbjct: 236 KAVAFLNDPFRLDEITEKLKFRKMKAAALHAEASKQEREATMRAFRGGKLEILLATDIAA 295
Query: 486 RGIDVQQV 509
RGID+ +
Sbjct: 296 RGIDIDDL 303
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ + VLDEAD+ML GF I D+ Q +L SAT+P D+ ++++ +M +P
Sbjct: 147 SNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLFSATIPKDIKKLAKRYMDEPQM 206
Query: 187 ILVQKEELTLEGIKQ 231
I VQ EE+T++ I+Q
Sbjct: 207 IQVQSEEVTVDTIEQ 221
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
AVIFC T+ + L +++ + + +HGD+ Q +RE +M+ FR + LI TD+ AR
Sbjct: 247 AVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAAR 306
Query: 489 GIDVQQV 509
G+DV V
Sbjct: 307 GLDVDGV 313
>UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: RNA
helicase - Lactobacillus acidophilus
Length = 453
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Frame = +3
Query: 282 LYDTLSIAQ---AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGS 452
LY L++ Q A++F NT++KVD LT+ + + V+ +HG + +RER+ +RQ G
Sbjct: 235 LYKVLTMGQPYLALVFANTKQKVDELTKFLQDQGLKVAKIHGGVTERERKRTLRQVEQGQ 294
Query: 453 SRVLITTDLLARGIDVQQV 509
+ ++ +DL ARG+D+ V
Sbjct: 295 YQYVVASDLAARGLDIDGV 313
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K FV+DEAD L GF I V + DVQ+ SAT+P + R +M P +I+
Sbjct: 149 VKTFVIDEADMTLDMGFLSDIDQVASKMPKDVQIAAFSATIPVKLSNFLRKYMAHPDQIV 208
Query: 193 VQKEELTLEGIKQFYIAI 246
+ + IK I I
Sbjct: 209 IDNPSIIAPTIKNDLIDI 226
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K++ LC L T Q ++F T+ D + + + + SA+HG+ Q R + F
Sbjct: 253 KVDLLCHLIKTNKWKQVLVFARTKHGADKVVKILCHQHMRASAIHGNKSQGARTRALEGF 312
Query: 441 RTGSSRVLITTDLLARGIDVQQVP 512
+ G ++L+ TD+ ARGID+ Q+P
Sbjct: 313 KNGDIKILVATDIAARGIDIHQLP 336
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ +K+ VLDEAD ML GF I V + L + Q ++ SAT + +++ + DPV
Sbjct: 169 DNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKNRQNMMFSATFSTPIKKLALGLLNDPVE 228
Query: 187 I 189
I
Sbjct: 229 I 229
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/89 (33%), Positives = 48/89 (53%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N+ K+ LDEAD ML GF I + + +++ Q +L SAT P ++++ + FM +P
Sbjct: 145 NSPKMLCLDEADRMLDMGFFPDIMWIVERMTSRQQTLLFSATFPQEIIDAAHEFMNEPDF 204
Query: 187 ILVQKEELTLEGIKQFYIAIELENGSWKL 273
+L EEL + I + + I N W L
Sbjct: 205 VLTNAEELDIPPIDLYSVRIGRSNKLWVL 233
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/85 (34%), Positives = 49/85 (57%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
H N +++FVLDEAD+ML GF I + L + Q + SATMP ++ +++ +++P
Sbjct: 209 HLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKERQNLFFSATMPSEIGKLAGELLKNP 268
Query: 181 VRILVQKEELTLEGIKQFYIAIELE 255
++ + T+E I Q I IE +
Sbjct: 269 AQVAITPSATTVERIDQSLIFIEAQ 293
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K L +L S+ ++++F T+R D + + + +A+HGD Q +RE + F
Sbjct: 295 KRPLLAELLADKSVERSIVFTRTKRGADRVAKYLVASGIEAAAIHGDKTQGQRERALAAF 354
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G + LI TD+ ARGIDV V
Sbjct: 355 KAGQVKALIATDIAARGIDVNDV 377
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 60.1 bits (139), Expect = 5e-08
Identities = 37/101 (36%), Positives = 48/101 (47%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
V DEAD ML GFKD+I +V K L + Q +L SAT+ D +L SR +R P I V +
Sbjct: 162 VFDEADRMLDMGFKDEIVEVLKRLPSTRQTLLFSATLDDRMLSFSRRLLRSPQVIEVAQR 221
Query: 205 ELTLEGIKQFYIAIELENGSWKLCVTCMIHCLLHKL*FSAT 327
T I + ++ LC L L FS T
Sbjct: 222 NTTASSIVERVFNVDANRKCAMLCHLITQESWLQSLIFSRT 262
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/83 (32%), Positives = 42/83 (50%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K LC L S Q++IF T++ D L + M A H D+ Q RE ++ F
Sbjct: 240 KCAMLCHLITQESWLQSLIFSRTKQGADALVKQMKQAGVAAEAFHADLSQAVREQVLAAF 299
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G L+ TD+ ARG+D+ ++
Sbjct: 300 KAGEVTALVATDVAARGLDINEL 322
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/73 (41%), Positives = 42/73 (57%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I+ VLDEAD ML GFK Q+ + + L Q +L SATM +V + +R +RDPVR+
Sbjct: 146 IEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLFSATMAGEVADFARAHLRDPVRVE 205
Query: 193 VQKEELTLEGIKQ 231
V + T +Q
Sbjct: 206 VARSGTTAARAEQ 218
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+IF T+R+ D + + + V+ +H D Q +R + + F+ G+ RVL+ TD+ ARG
Sbjct: 244 LIFTRTKRRADKIWKHIGRAGHKVARIHADRSQAQRRMALDGFKDGTYRVLVATDIAARG 303
Query: 492 IDVQQV 509
IDV ++
Sbjct: 304 IDVAEI 309
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 60.1 bits (139), Expect = 5e-08
Identities = 25/76 (32%), Positives = 46/76 (60%)
Frame = +3
Query: 282 LYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRV 461
L D AV+FCNT+++ + + + F+ A+HGD++Q++R+ + +F S V
Sbjct: 238 LLDKFKSESAVVFCNTKQEAKDICKDLSKVGFSTLALHGDLEQKDRQENLVRFANKSVAV 297
Query: 462 LITTDLLARGIDVQQV 509
L+ TD+ ARG+D+ +
Sbjct: 298 LVATDVAARGLDIDSI 313
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
++ VLDEAD ML GF+D+I + + Q +L SAT P + +++ M+DP+RI
Sbjct: 148 VRTLVLDEADRMLDMGFQDEIDAIIDQTNKQRQTLLFSATYPKKIATIAKRVMKDPLRIE 207
Query: 193 VQKEELTLEGIKQFYIAIELEN 258
+ + I+Q + + E+
Sbjct: 208 LDSQVHEESTIEQHFYKVTSES 229
>UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=1;
Reinekea sp. MED297|Rep: Probable ATP-dependent RNA
helicase - Reinekea sp. MED297
Length = 448
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+A++F TR + + L ++ L V+ +HG+++Q ER IM +FR G V++ TDL A
Sbjct: 244 KAIVFTKTRVQAEELANNLRLHQKRVATLHGEIEQDERNRIMTRFRDGVVDVIVATDLAA 303
Query: 486 RGIDVQQV 509
RG+DV+ V
Sbjct: 304 RGLDVEGV 311
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPD-DVLEVSRCFMRDPVRI 189
++ VLDE D ML GF+D++ + + D Q +LLSAT+ V V++ + D I
Sbjct: 146 VECLVLDECDRMLDMGFRDEVLAIAGQIRNDHQTLLLSATLKHRGVSSVAKDILNDAEFI 205
Query: 190 LVQKEELTLEGIKQ 231
+ K E+ E I+Q
Sbjct: 206 QI-KPEMLQENIRQ 218
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/84 (32%), Positives = 47/84 (55%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ + + V+DEAD ML GF D++ ++ K Q +L SATM D V E+ + + P+R
Sbjct: 371 SALDVLVIDEADRMLEAGFTDELEEIIKACPRSRQTMLFSATMTDSVDELVKLSLDKPIR 430
Query: 187 ILVQKEELTLEGIKQFYIAIELEN 258
+ V + T G+ Q ++ I ++
Sbjct: 431 VFVDPKRNTARGLTQEFVRIRSDD 454
Score = 37.9 bits (84), Expect = 0.23
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+ +IF ++ + L + +HG++ Q +R + F+ G+ L+ TDL +
Sbjct: 471 KCIIFFRSKALAHQMRIVFGLFGLKAAELHGNLTQEQRLQALNDFKAGTVDYLLATDLAS 530
Query: 486 RGIDVQQV 509
RG+D++ V
Sbjct: 531 RGLDIKGV 538
>UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;
n=2; Euteleostomi|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 645
Score = 59.7 bits (138), Expect = 7e-08
Identities = 24/71 (33%), Positives = 48/71 (67%)
Frame = +3
Query: 297 SIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTD 476
S + ++FC T+++ L+ + ++ + ++HGD+ Q++REV ++ FR GS VL+ T+
Sbjct: 405 SHGRTIVFCETKKEATELSLNTSIKQ-SAQSLHGDIPQKQREVTLKGFRNGSFEVLVATN 463
Query: 477 LLARGIDVQQV 509
+ ARG+D+ +V
Sbjct: 464 VAARGLDIPEV 474
Score = 39.1 bits (87), Expect = 0.099
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVF-----KMLSADVQVILLSATMPDDVLEVSRCFMR 174
VLDE D+ML GF +Q+ ++ K Q +L SAT P V +V++ +MR
Sbjct: 305 VLDEVDQMLDMGFAEQVEEILSASYKKDAEQKPQTLLFSATCPSWVYDVAKKYMR 359
>UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 630
Score = 59.7 bits (138), Expect = 7e-08
Identities = 26/87 (29%), Positives = 51/87 (58%)
Frame = +3
Query: 249 IREWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVI 428
+ + K+ L + + QA+IF N + K + + + ++++V +HGD Q +R +
Sbjct: 330 VTKQKINILTSVLKQIKFNQAIIFYNDKIKGENIFSELKAQNYSVIFIHGDQTQADRIKV 389
Query: 429 MRQFRTGSSRVLITTDLLARGIDVQQV 509
M Q R ++++I+TDLL+RGID+ +
Sbjct: 390 MNQIRRNKTQIIISTDLLSRGIDITTI 416
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 59.7 bits (138), Expect = 7e-08
Identities = 38/85 (44%), Positives = 48/85 (56%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
+WKL+ CDLY+TL +A AV F N+R+KVDWL S H
Sbjct: 273 KWKLDPSCDLYETLIMAPAVRFINSRKKVDWLIFSFH----------------------- 309
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+GSSR+LI+TD LA+G DVQQV
Sbjct: 310 ---SGSSRILISTDGLAKGYDVQQV 331
Score = 33.1 bits (72), Expect = 6.5
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = +1
Query: 151 EVSRCFMRDPVRILVQKEEL-----TLEGIKQFYIAIELENGSWKLCVTCMIH 294
EV++ FMRDP++ILV+K++ + EGI I +E WKL +C ++
Sbjct: 233 EVTKKFMRDPIQILVKKKKKKRGVDSKEGIGP--SCINMEREKWKLDPSCDLY 283
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K V+DEADEML+ GF DQ+ + L +L SAT+P+DV +SR +M P I
Sbjct: 147 LKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPTHIE 206
Query: 193 VQKEELTLEGIKQFYIAIELE 255
++ +T + I+ + E
Sbjct: 207 IKAAGITTDKIEHTLFEVREE 227
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/85 (34%), Positives = 44/85 (51%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E KL L D+ + +IFC T+ VD + + ++ +HG M Q +R +M
Sbjct: 227 EEKLSLLKDVTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMD 286
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
FR G R L+ TD+ ARGID+ +
Sbjct: 287 DFRKGKFRYLVATDVAARGIDIDNI 311
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K TL L ++ A++FCN +R VD + + + D +HGD+ Q R + +F
Sbjct: 519 KRRTLKKLLRRENVQSAIVFCNRKRDVDMIQQYLTKHDIEAGHLHGDLAQSLRFSTLERF 578
Query: 441 RTGSSRVLITTDLLARGIDV 500
R+G + L+ +D+ ARGID+
Sbjct: 579 RSGELKFLVCSDVAARGIDI 598
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
V+DEAD ML GF I + +L A Q + SATM ++ ++ F+R PV I V ++
Sbjct: 441 VIDEADRMLDMGFIPDIEKIVALLPAHRQTLFFSATMAPEIRRLADAFLRHPVEITVSRQ 500
Query: 205 ELTLEGIKQFYIAI 246
I++ + +
Sbjct: 501 SSVATTIEEALVIV 514
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
VLDEADEML GF D + + + L + QV+L SATMP ++ +S+ ++ DP + ++ +
Sbjct: 219 VLDEADEMLRMGFIDDVEWILEQLPKERQVVLFSATMPPEIRRLSKRYLNDPAEVTIKTK 278
Query: 205 ELTLEGIKQFYIAIELEN 258
+ + I+Q I + + +
Sbjct: 279 DQDGKLIRQRAITVPMSH 296
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KLE L + D +IF T+ + E++ V+ ++GD+ Q +RE + +
Sbjct: 297 KLEALQRVLDACGGEGVIIFARTKVITLTVAETLEAAGHQVAVLNGDVPQNQRERTVERL 356
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R+GS VL+ TD+ ARG+DV+++
Sbjct: 357 RSGSVDVLVATDVAARGLDVERI 379
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 59.7 bits (138), Expect = 7e-08
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
K VLDEAD+ML GF + + ++ D Q +L SATM ++ +++ ++ DPV++ V
Sbjct: 252 KFLVLDEADQMLDIGFLPAVKRIISKVNKDRQTLLFSATMSKEIKKLTETYLTDPVQVSV 311
Query: 196 QKEELTLEGIKQFYIAIELENGSWKLCVTCMIHCLLHKL*FSAT-----PVARWIGSLNL 360
E T++ I+Q + + +N L + + FS T + +W+G+ N+
Sbjct: 312 TPENSTVDKIEQSLMHLSKQNKGLALQRIISANPKKRVIVFSRTKHGSDKLVKWLGTQNI 371
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/65 (30%), Positives = 38/65 (58%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+ ++F T+ D L + + ++ A+HG+ Q +R+ + F+ G + +LI TD+ A
Sbjct: 348 RVIVFSRTKHGSDKLVKWLGTQNIGADAIHGNKSQGQRQRALDDFKKGKTYILIATDIAA 407
Query: 486 RGIDV 500
RGID+
Sbjct: 408 RGIDI 412
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++FVLDEAD ML GF + V K+L A Q + SATMP +V+++ +++PV++
Sbjct: 147 LEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTLFFSATMPPEVMDLVNGLLKNPVKVA 206
Query: 193 VQKEELTLEGIKQFYIAIELEN 258
V +E I Q ++ N
Sbjct: 207 VDPVSSPVEIIDQSVYLVDKGN 228
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/83 (27%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L L + L + A++F T+ + + + T +A+HG+ Q R+ + F
Sbjct: 229 KTKLLAWLVEGLDVKNAIVFTRTKHGANKVAGDLVKAGITAAAIHGNKSQTARQQALADF 288
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G R L+ TD+ ARG+D++++
Sbjct: 289 KAGKVRCLVATDIAARGLDIEEL 311
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 59.7 bits (138), Expect = 7e-08
Identities = 26/86 (30%), Positives = 52/86 (60%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
R+ K L L + + + +IF NT+R+ ++L + ++ +F + GD++QR+R I+
Sbjct: 230 RKEKFPLLLGLLRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKIL 289
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
F+ G+ ++I TD+ +RGI ++ V
Sbjct: 290 ADFKDGTLPIMIATDVASRGIHIEGV 315
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSA--DVQVILLSATMPDDVLEVSRCFMRDPVR 186
++ V+DEAD M GF + + + L Q +L SAT+ V+E++ FM P +
Sbjct: 149 VEALVIDEADRMFDMGFIADLRFILRRLPPYDKRQNLLFSATLNTRVMELAYEFMNMPEK 208
Query: 187 ILVQKEELTLEGIKQ 231
+ V E++T E ++Q
Sbjct: 209 VSVTPEQMTAERVEQ 223
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 59.7 bits (138), Expect = 7e-08
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFT-VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
++F T+R+ D+L + F+ ++HGD DQ ERE+++ FR G +L+ TD+ AR
Sbjct: 356 IMFAGTKRRCDFLDRRLKQVGFSSAGSIHGDKDQYEREMVLDNFRRGRGNILVATDVAAR 415
Query: 489 GIDVQQVPA 515
G+D+ V A
Sbjct: 416 GLDIPGVAA 424
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
VLDEAD ML GF+ QI +FK+ + Q ++ +AT P V +++ F P+ I +
Sbjct: 256 VLDEADRMLDMGFEPQIKKIFKLCPSARQTVMFTATWPKGVQKIADAFTTKPIHIQI 312
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 59.7 bits (138), Expect = 7e-08
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
++F T+R D+L M F +++HGD QRERE+ + F++G VLI T + ARG
Sbjct: 427 LVFVETKRNADYLASLMSETQFPTTSIHGDRLQREREMALYDFKSGRMDVLIATSVAARG 486
Query: 492 IDVQQV 509
+D++ V
Sbjct: 487 LDIKNV 492
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLS----ADVQVILLSATMPDDVLEVSRCFMRDP 180
+ VLDEAD ML GF I V + Q ++ SAT P ++ E++ F+ +
Sbjct: 324 VNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNY 383
Query: 181 VRILV 195
+ + V
Sbjct: 384 ICVFV 388
>UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 619
Score = 59.7 bits (138), Expect = 7e-08
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLR-DFTVSAMHGDMDQREREVIMRQ 437
K L DL +++ + +IF N + D L + ++ ++MH D QRERE +R
Sbjct: 373 KKRALNDLINSMPPQRTIIFVNNKWTADELDDYLYNECKLPCTSMHADRTQREREDALRA 432
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
FR G++ +L+TT + ARGIDV+ V
Sbjct: 433 FRAGTAPILVTTGVTARGIDVRNV 456
Score = 35.1 bits (77), Expect = 1.6
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSA--DVQVILLSATMPDDVLEVSRCFM-RDPV 183
++ V+DEADEML+ +++ + + A +++ +L SAT P + +++R + D V
Sbjct: 288 VRYVVIDEADEMLTADWEEDMKKIMSAGGAAQEIKYLLFSATFPKKIRDLAREHLSEDHV 347
Query: 184 RILVQKEELTLEGIKQFYI 240
++ V + T I Q I
Sbjct: 348 QLRVGRAGSTHSNIIQTVI 366
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 59.7 bits (138), Expect = 7e-08
Identities = 23/66 (34%), Positives = 43/66 (65%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
++F T+R D+L + ++F +++HGD Q +RE +R F+ GS +VLI T + +RG
Sbjct: 493 IVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRG 552
Query: 492 IDVQQV 509
+D++ +
Sbjct: 553 LDIKNI 558
Score = 37.1 bits (82), Expect = 0.40
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFKMLSA--DVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+ VLDEAD ML GF + + + ++ + Q ++ SAT P+++ ++ F+++ V +
Sbjct: 394 RFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFV 453
Query: 190 LV 195
+
Sbjct: 454 AI 455
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 59.7 bits (138), Expect = 7e-08
Identities = 23/68 (33%), Positives = 47/68 (69%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+ +IFC T+++ L+++ ++ ++HGD+ Q++RE+ ++ FR GS VL+ T++ A
Sbjct: 440 RTIIFCETKKEAQELSQNSAIKQ-DAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAA 498
Query: 486 RGIDVQQV 509
RG+D+ +V
Sbjct: 499 RGLDIPEV 506
Score = 41.5 bits (93), Expect = 0.019
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDV----FKMLSAD-VQVILLSATMPDDVLEVSRCFMR 174
+K VLDE D+ML GF DQ+ ++ +K S D Q +L SAT P V V++ +M+
Sbjct: 333 LKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMK 391
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/75 (40%), Positives = 41/75 (54%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
IK VLDEADEML GF D + + + Q L SATMP + ++ ++RDP I
Sbjct: 151 IKTMVLDEADEMLRMGFIDDVETILQKTPESRQTALFSATMPSAIKRIATTYLRDPDLIT 210
Query: 193 VQKEELTLEGIKQFY 237
V + T + I+Q Y
Sbjct: 211 VAAKTGTADNIRQRY 225
Score = 59.3 bits (137), Expect = 9e-08
Identities = 25/83 (30%), Positives = 50/83 (60%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KL+ L + + + +IF T+ + L + R F+ +A++GD+ Q++RE ++Q
Sbjct: 233 KLDALTRILEAENFDGMIIFARTKLGTEELASKLQARGFSAAAINGDIQQQQRERTIQQL 292
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G +L+ TD+ ARG+DV+++
Sbjct: 293 KDGKIDILVATDVAARGLDVERI 315
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K VLDEADEML GF D + + Q L SATMP + +V++ ++++ +
Sbjct: 168 LKALVLDEADEMLRMGFIDDVEAILAKTPDTCQRALFSATMPPQIKKVAQTYLKNATEVR 227
Query: 193 VQKEELTLEGIKQFYIAIELE 255
++ E T+E I QF + + E
Sbjct: 228 IESETRTVERIAQFVLPVYAE 248
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/85 (30%), Positives = 47/85 (55%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E KL+ L + + ++IF T+ + L E + R V+ + GD++QR+RE +
Sbjct: 248 ERKLDALTRILEVEPFDASIIFVRTKAETTMLAEKLSARGHAVAPLSGDLNQRQREQTVE 307
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+ G ++I TD+ ARG+DV ++
Sbjct: 308 DLKRGKKDIIIATDVAARGLDVPRI 332
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 59.3 bits (137), Expect = 9e-08
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K E L +L + Q ++F +T+ + L + + L + HGD Q R ++ F
Sbjct: 249 KAELLSELVGRNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDF 308
Query: 441 RTGSSRVLITTDLLARGIDVQQVP 512
+ G RVL+ TD+ ARG+D+Q +P
Sbjct: 309 KAGKLRVLVATDVAARGLDIQALP 332
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+++ V+DEAD ML GF I V ++++ + Q +L SAT D V ++S + P
Sbjct: 166 SSVTTLVIDEADRMLDLGFVRDIEKVKRLIATEHQTMLFSATYSDAVKQLSHKMLNQPEW 225
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
+ V E T ++Q ++
Sbjct: 226 VNV-AENTTASTVEQLVYRVD 245
>UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3;
Ostreococcus|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1025
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/79 (35%), Positives = 49/79 (62%)
Frame = +3
Query: 273 LCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGS 452
+C+L D ++ VIF NT+R+V+ L ++ F V ++HGD Q +RE +R+F
Sbjct: 291 ICELPDD---SRVVIFANTKRRVENLAKTFSAEGFGVVSVHGDKSQADREASLRKFIDNK 347
Query: 453 SRVLITTDLLARGIDVQQV 509
+++ TD+ ARG+D++ V
Sbjct: 348 CPLMMATDVAARGLDIKGV 366
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM-RDPVRI 189
+ + VLDEAD ML GF+ QI +F A Q +L SAT P V +++ C++ +D R+
Sbjct: 192 LSVIVLDEADRMLDMGFEPQIKTIFGATPASRQTLLFSATWPKSVRKLAACYLNQDKSRV 251
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 59.3 bits (137), Expect = 9e-08
Identities = 25/69 (36%), Positives = 44/69 (63%)
Frame = +3
Query: 303 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 482
A ++F T+R VD L + + + +A+HGD Q ERE M+ F++G++ +++ TD+
Sbjct: 533 ALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQMERERAMKSFKSGATPIMVATDVA 592
Query: 483 ARGIDVQQV 509
ARG+D+ V
Sbjct: 593 ARGLDIPHV 601
Score = 36.7 bits (81), Expect = 0.53
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADV----QVILLSATMPDDV 147
IK LDEAD ML GF+ QI + + + Q +L SAT P+++
Sbjct: 271 IKYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPNEI 319
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 59.3 bits (137), Expect = 9e-08
Identities = 24/76 (31%), Positives = 48/76 (63%)
Frame = +3
Query: 282 LYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRV 461
L D + ++ +IF +T++ D +T + + + ++HGD Q ER+ ++ +F++G S +
Sbjct: 306 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPI 365
Query: 462 LITTDLLARGIDVQQV 509
+ TD+ ARG+DV+ V
Sbjct: 366 MTATDVAARGLDVKDV 381
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I VLDEAD ML GF+ QI + + D Q + SAT P +V +++R F+ DP +++
Sbjct: 215 ITYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVI 274
Query: 193 VQKEEL 210
+ EEL
Sbjct: 275 IGSEEL 280
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 59.3 bits (137), Expect = 9e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L ++ DT + ++F T+R D+L + F +++HGD Q++RE + +F
Sbjct: 592 KRDKLIEILDTEGTNRNLVFVQTKRLADFLASYLCQNGFHTTSIHGDRLQQQREEALAEF 651
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G+ VLI T + ARG+D+ V
Sbjct: 652 KAGTQHVLIATAVAARGLDIADV 674
Score = 37.9 bits (84), Expect = 0.23
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGF----KDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
+K +LDEAD ML GF K I+D D ++ SAT P ++ ++ F+ +
Sbjct: 506 LKYLILDEADRMLDMGFLPEIKAIINDFDMPPKEDRHTLMFSATFPTEIQNLAAEFLNNY 565
Query: 181 VRILVQKEELTLEGIKQFYIAIE 249
V + + K T I Q + +E
Sbjct: 566 VYLTIGKVGGTHSDITQCIMEVE 588
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+K FV+DE D L + + ++F L + QV++ SATM D++ +V++ FM+D I
Sbjct: 185 VKWFVVDEFDRCLEDVKMRRDVQEIFMKLPKEKQVMMFSATMTDELRDVAKKFMKDATEI 244
Query: 190 LV-QKEELTLEGIKQFYIAI 246
V Q+ +LTL G+ QFY+ +
Sbjct: 245 YVDQRAKLTLHGLAQFYMNV 264
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/83 (26%), Positives = 42/83 (50%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K L ++ D + QA+IF ++ + + L + F A+H M Q ER +
Sbjct: 269 KTRRLAEILDVVEFNQAIIFTSSVERCEALNRQLQQMKFPSQAVHSRMSQEERLRVYESC 328
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ ++R+++ TDL RG+D ++
Sbjct: 329 KANNTRIMVATDLFGRGVDFDRI 351
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAV-IFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 437
K+ L D L+ V IF T++ + ++ ++ F A+HGD Q++R+ +M +
Sbjct: 333 KINQLIKQLDCLTQKDKVLIFAQTKKGCESMSRILNKEGFKCLAIHGDKAQKDRDYVMNK 392
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
F++G R+LI TD+ +RG+DV+ V
Sbjct: 393 FKSGECRILIATDVASRGLDVKDV 416
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD-PVRI 189
+ VLDEAD ML GF+ QI + + D Q ++ SAT P +V +++ + ++ PV +
Sbjct: 249 VTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSATWPKNVQNLAQDYCKNTPVYV 308
Query: 190 LVQKEELTL-EGIKQ 231
+ K EL + E IKQ
Sbjct: 309 QIGKHELAINERIKQ 323
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 59.3 bits (137), Expect = 9e-08
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K L L D L A++F NT++ D + +++ + V+ +HG Q +RE+ + F
Sbjct: 563 KFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGF 622
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R VL+ TD++ RGID+ V
Sbjct: 623 RAKRYNVLVATDVVGRGIDIPDV 645
Score = 33.9 bits (74), Expect = 3.7
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 17/98 (17%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFK-MLSADVQ----------------VILLSATM 135
N VLDEAD M+ GF+ Q+ V M S++++ + SATM
Sbjct: 462 NQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATM 521
Query: 136 PDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 249
P V ++R ++R+PV + + T + I Q I ++
Sbjct: 522 PPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMK 559
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/81 (37%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Frame = +1
Query: 7 NTIKLFVLDEADEML----SRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 174
++I+LFVLDEAD++L S F++QI+ ++ L A+ Q++ LSAT P+ + + +MR
Sbjct: 167 SSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQMLALSATYPESLAQQLSRYMR 226
Query: 175 DPVRILVQKEELTLEGIKQFY 237
+P + + + L G+KQ+Y
Sbjct: 227 EPTFVRLNPTDPGLLGLKQYY 247
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/85 (29%), Positives = 46/85 (54%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E K+++L +L+ + QA++F N + L + + + + G + Q +R M
Sbjct: 261 EEKVQSLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLPAVCISGGLSQDQRLEAMW 320
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+ + RVLI+TDL +RGID ++V
Sbjct: 321 KLKQYQCRVLISTDLTSRGIDAEKV 345
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+ L + DT + + +IF T++ L + + A+HGD+ QR+RE + F
Sbjct: 227 KIHELMHIIDTHPMEKMLIFVKTKKDAKDLFFLLTKKGIRAQALHGDLTQRQREKALSAF 286
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
++G+ +LI TD+ ARG+D++ V
Sbjct: 287 KSGAVSILIATDVAARGLDIKDV 309
Score = 38.3 bits (85), Expect = 0.17
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR-I 189
++ VLDE D+ML GF + I + L + + SAT+P + +++ F++ + +
Sbjct: 144 VEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTYMFSATVPSRIELLAKRFLKSDFKFV 203
Query: 190 LVQKEEL 210
VQ EL
Sbjct: 204 KVQSVEL 210
>UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 782
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K+ VLDEAD L GF+ ++ + + L + Q +L SAT V +++R ++DP+ I
Sbjct: 188 MKILVLDEADRCLDMGFEKTMNSIIENLPLERQTLLFSATQTKTVKDLARLSLKDPLYIS 247
Query: 193 VQKE--ELTLEGIKQFYIAIELE 255
V + T EG++Q YI ELE
Sbjct: 248 VHENAAHTTPEGLQQSYIVCELE 270
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N +KLFVLDEAD+++ F+ I++++ L Q+I+ SAT P ++ +M+ P
Sbjct: 165 NLVKLFVLDEADKLMEESFQSDINEIYNSLPPRKQMIVSSATYPQELDTFLANYMQSPTH 224
Query: 187 ILVQKEELTLEGIKQF 234
+ + E L G+KQF
Sbjct: 225 VTSENETPLLLGLKQF 240
Score = 37.1 bits (82), Expect = 0.40
Identities = 19/83 (22%), Positives = 41/83 (49%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L + +S Q ++F N + + + ++ ++ + + + Q ER +
Sbjct: 257 KNDLLITILTKVSFVQCLVFTNYQSRTETVSNYLNQKGWDSVFISAAQKQTERLEAIDNL 316
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ +R+L++TDL +RGID V
Sbjct: 317 KKFKNRILLSTDLTSRGIDAPNV 339
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 58.8 bits (136), Expect = 1e-07
Identities = 23/82 (28%), Positives = 49/82 (59%)
Frame = +3
Query: 264 LETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFR 443
L+ + D Y + +IFC TR++ + + + + ++HG++ Q +R+ +M++FR
Sbjct: 233 LKRIVDYYPQI---YGIIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDAVMQKFR 289
Query: 444 TGSSRVLITTDLLARGIDVQQV 509
+ ++L+ TD+ ARG+DV +
Sbjct: 290 IRNLQLLVATDVAARGLDVDDL 311
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/84 (25%), Positives = 47/84 (55%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+T+ V+DEADEML+ GF D I+ + + + +L SATM ++ +S+ ++++
Sbjct: 145 STVHNIVMDEADEMLNMGFTDSINAILADVPKERNTLLFSATMSPEIARISKNYLQNAKE 204
Query: 187 ILVQKEELTLEGIKQFYIAIELEN 258
I + ++ + +K ++ ++
Sbjct: 205 ITIGRKNESTSNVKHVAYTVQAKD 228
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
A++FC+TR V+ L + R F+V A+ G+ Q+ER + R+G +RV I TD+ AR
Sbjct: 248 AIVFCSTRASVNHLVARLGNRGFSVVALSGEFSQKERANALSSLRSGRARVCIATDVAAR 307
Query: 489 GIDVQQV 509
G+D+ ++
Sbjct: 308 GLDLPKL 314
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+ I+ VLDEADEML GF++++ + + + + ++ SAT+P + ++ + ++ +R
Sbjct: 148 SAIRAVVLDEADEMLDLGFREELELILEDTPKERRTLMFSATVPKGIAALATRYQKNGLR 207
Query: 187 ILVQKE 204
I +
Sbjct: 208 ITTDSD 213
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 28 LDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEE 207
LDEADEML+ GF +++ + L D Q +L SAT+P D+ ++ R ++ DP IL+ +E
Sbjct: 168 LDEADEMLNMGFFEEVTRILDNLPKDCQQLLFSATVPADIEQIIRDYLTDPETILLSGDE 227
Query: 208 LTLEGIKQ-FYIAIE 249
++E I Y A++
Sbjct: 228 YSVENIHNVMYPAVD 242
Score = 58.0 bits (134), Expect = 2e-07
Identities = 22/67 (32%), Positives = 40/67 (59%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
A++FCNTR + ++ + ++GD+ Q+ERE +M + + G R ++ TD+ AR
Sbjct: 262 AIVFCNTRNDTSLVAAVLNRNGYDAELLNGDLPQKERERVMAKVKRGEVRFMVATDIAAR 321
Query: 489 GIDVQQV 509
GID+ +
Sbjct: 322 GIDISDL 328
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/91 (28%), Positives = 55/91 (60%)
Frame = +3
Query: 228 TILHCN*IREWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 407
T+ C+ R+ K E L L + ++ A+IF T++ V +LT ++ + ++ +H ++
Sbjct: 224 TMYRCH--RDHKPENLLSLINLVNCDHALIFARTKKDVTFLTHLLNSKGYSSVGIHNEIP 281
Query: 408 QREREVIMRQFRTGSSRVLITTDLLARGIDV 500
Q++R+V + F+ + L+ TD+++RGID+
Sbjct: 282 QKQRQVSLNSFKNREVQFLVATDIVSRGIDI 312
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L DL A++F T+ D L + F +A+HG+ Q +RE ++ F
Sbjct: 301 KTQLLIDLLGNHRDELALVFSRTKHGADRLARKLSNAGFETAAIHGNRSQGQRERALKAF 360
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G+ +VL+ TD+ ARGID+ V
Sbjct: 361 REGTLKVLVATDVAARGIDIPDV 383
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
+ VLDEAD+ML GF + + +L A+ Q +L SATMP + E+SR ++ DP R+ V
Sbjct: 220 RFLVLDEADQMLDLGFIHALRKIAPLLPAERQTMLFSATMPKQMEELSRAYLTDPARVEV 279
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +3
Query: 273 LCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHG-DMDQREREVIMRQFRTG 449
L D+Y +S+ Q+++F +T + + M +VS ++G D+ ER ++ F+ G
Sbjct: 298 LSDIYGFISVGQSIVFVHTIATAKSVHQKMVDEGHSVSLLYGKDLTTEERFKQIKDFKDG 357
Query: 450 SSRVLITTDLLARGIDVQQV 509
S+VLITT++LARGID+ QV
Sbjct: 358 KSKVLITTNVLARGIDIPQV 377
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/78 (34%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLS-RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP-VR 186
+K+ VLDEAD ++ + +QI + ++L ++V+V L SAT V E+ + ++DP
Sbjct: 209 LKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKVCLFSATFSMGVEELIKKIVQDPYTS 268
Query: 187 ILVQKEELTLEGIKQFYI 240
I ++++EL++E I Q++I
Sbjct: 269 IRLKRQELSVEKIHQYFI 286
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 13 IKLFVLDEADEMLS--RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
IKLFVLDEAD+++ Q+ + + L Q++L SAT D V + + F +
Sbjct: 300 IKLFVLDEADDLIDIKNNMSSQVETIKRFLPRSCQILLFSATYNDSVRKFADQFAPKATK 359
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
I V++E+LTL+ +KQ+Y+ E
Sbjct: 360 ISVRQEDLTLKCVKQYYLITE 380
Score = 51.6 bits (118), Expect = 2e-05
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 18/103 (17%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKV----DWLTESMH----------LRDFTVSAM 392
E K L +LY +++I+Q VIF N+++ +++TE+ H + FT + +
Sbjct: 383 EQKYYYLSELYCSMTISQCVIFVNSKKSAYNLYNFMTENSHNVTLICADSIISRFTKNQI 442
Query: 393 HG----DMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
MD + R+ +M F+ G S+VLI TDLL+RGIDV +
Sbjct: 443 QKANVLGMDPKTRDTLMADFKKGISKVLICTDLLSRGIDVPSI 485
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/86 (31%), Positives = 47/86 (54%)
Frame = +3
Query: 252 REWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 431
R KL + + Y T + ++F NT+ D + + + F+ +HG+ Q +RE +
Sbjct: 517 RRNKLRAMLNTYGTGKLV--IVFVNTKSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAAL 574
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
+ FR G + VL+ TD+ ARG+D+ V
Sbjct: 575 QSFRDGRTNVLVATDVAARGLDIPDV 600
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/68 (35%), Positives = 41/68 (60%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+ ++FC +R D L + + A+HGD +QR+RE I+ +FR L+ TD+ A
Sbjct: 347 RVLVFCKMKRTADELERQLRRWGYDAMAIHGDKEQRQREFILARFRKDPRLCLVATDVAA 406
Query: 486 RGIDVQQV 509
RG+D++Q+
Sbjct: 407 RGLDIKQL 414
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ VLDEAD ML GF+ Q+ + + D Q ++ SAT P ++ ++ F + +RI
Sbjct: 249 VTYLVLDEADRMLDMGFEPQVRKICGQIRPDRQTVMFSATWPREIQRLAAEFQKQWIRIS 308
Query: 193 VQKEEL 210
V EL
Sbjct: 309 VGSTEL 314
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/66 (36%), Positives = 42/66 (63%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+IF T+R D +T + + ++HGD Q ER+ ++ QF+TG S +++ TD+ +RG
Sbjct: 385 LIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRG 444
Query: 492 IDVQQV 509
IDV+ +
Sbjct: 445 IDVRNI 450
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ VLDEAD ML GF+ QI + + D Q ++ SAT P +V ++ F++D +++
Sbjct: 282 VTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVN 341
Query: 193 VQKEEL 210
+ EL
Sbjct: 342 IGSMEL 347
>UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1;
Mycoplasma penetrans|Rep: ATP-dependent RNA helicase -
Mycoplasma penetrans
Length = 457
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/91 (29%), Positives = 54/91 (59%)
Frame = +3
Query: 231 ILHCN*IREWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQ 410
++H N E K + L ++ L+ ++FCNT+++VD L + ++ V +H ++
Sbjct: 219 VIHYN-HNEDKNKMLLNIIKKLNPFFGIVFCNTKKEVDALYDYIYQNKIPVLKLHSGLEN 277
Query: 411 REREVIMRQFRTGSSRVLITTDLLARGIDVQ 503
R+R+ I R+ + + +LI TDL +RG+D++
Sbjct: 278 RQRKNIFREIKENNINLLIATDLASRGVDIE 308
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 58.4 bits (135), Expect = 2e-07
Identities = 24/83 (28%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+ + +++ ++ A+IF TR V L + R F + GD+ Q R ++ +F
Sbjct: 280 KIAAITRVFEVETVESALIFARTRATVSELANELISRGFAAEGLSGDLSQEARTRVLSRF 339
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G +VL+ TD+ ARG+D+ +
Sbjct: 340 KKGQIKVLVATDVAARGLDIDDI 362
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K VLDEADEMLS GF D I + D Q +L SAT+ V+ ++ ++ P I
Sbjct: 198 LKTLVLDEADEMLSMGFIDDIETILSQTPKDRQTMLFSATLSSRVMSIANRYLHSPESIS 257
Query: 193 VQKEELTLEGIKQFYIAI 246
+ +++ I+Q Y I
Sbjct: 258 ISPKQMIGSSIEQRYYLI 275
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+++ VLDEADEML GF D + + + A+ Q L SATMPD + V+ ++R+P
Sbjct: 186 DSLTTLVLDEADEMLRMGFIDDVEWILQHTPAERQTALFSATMPDAIRRVAHRYLREPRE 245
Query: 187 ILVQKEELTLEGIKQFYIAIEL 252
+ ++ T+ +Q Y I +
Sbjct: 246 VKIKASTTTVSTTRQRYCQISV 267
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/67 (32%), Positives = 42/67 (62%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
A+IF T+ L + + R ++ +A++GDM Q+ RE ++ Q + G +++ TD+ AR
Sbjct: 287 AIIFVRTKTATVELADKLEARGYSAAALNGDMTQQLRERVIEQLKGGQLDIVVATDVAAR 346
Query: 489 GIDVQQV 509
G+DV ++
Sbjct: 347 GLDVSRI 353
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/83 (32%), Positives = 41/83 (49%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L DL +IF T+ D + + TV +H D +QRER + F
Sbjct: 358 KFDLLIDLLSRTEFKSVIIFTRTKMGADRIAHRLQREGHTVGVIHSDRNQRERVEALEGF 417
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
++G VL+ TD+ ARG+D+ V
Sbjct: 418 KSGKFEVLVATDIAARGLDIAGV 440
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++ VLDE D ML GF + + + Q + SAT+P ++ +++ +RDPV I
Sbjct: 276 VEILVLDEVDRMLDMGFLPDVKRIVQQCPQARQTLFFSATLPPELAQLASWALRDPVEIK 335
Query: 193 VQKEELTLEGIKQ-FY 237
+ + E I FY
Sbjct: 336 IGQRRSPAETISHAFY 351
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/86 (31%), Positives = 46/86 (53%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E K +C L + +++Q ++F NT+ L + + +A+HGD Q ER +
Sbjct: 252 EDKRMAVCHLIQSKALSQVIVFSNTKLGTARLARHLEKEGVSSTAIHGDKTQIERTKSLE 311
Query: 435 QFRTGSSRVLITTDLLARGIDVQQVP 512
F+ G VL+ TD+ ARG+D+ +P
Sbjct: 312 AFKAGEVTVLVATDVAARGLDIADLP 337
Score = 56.0 bits (129), Expect = 8e-07
Identities = 28/81 (34%), Positives = 44/81 (54%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++ VLDEAD ML GF + + +L Q +L SAT ++ ++++ FM P I
Sbjct: 171 VQVLVLDEADRMLDMGFLPDLQRIINLLPKTRQNLLFSATFSPEIQKLAKSFMVSPTLIE 230
Query: 193 VQKEELTLEGIKQFYIAIELE 255
V + T E IKQ A++ E
Sbjct: 231 VARRNATSENIKQVIFALDSE 251
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 58.4 bits (135), Expect = 2e-07
Identities = 23/67 (34%), Positives = 43/67 (64%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
A++FCN + +V+ + + + F+ + GDM+Q +R ++ QF + S +VL+ TD+ AR
Sbjct: 245 AIVFCNRKTQVNDVVDELIEDGFSAKGLQGDMEQHQRTSVLMQFASDSLQVLVATDVAAR 304
Query: 489 GIDVQQV 509
G+D+ V
Sbjct: 305 GLDIDDV 311
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/65 (38%), Positives = 39/65 (60%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+KL VLDEAD ML GF+D + +F VQ +L SAT + + V++ ++ +PV
Sbjct: 148 VKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQTLLFSATFTEQIERVAKQYLHNPVTCK 207
Query: 193 VQKEE 207
V+ +E
Sbjct: 208 VESQE 212
>UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FAL1,
involved in rRNA maturation, DEAD-box superfamily; n=2;
Ostreococcus|Rep: Predicted ATP-dependent RNA helicase
FAL1, involved in rRNA maturation, DEAD-box superfamily
- Ostreococcus tauri
Length = 1222
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/65 (38%), Positives = 40/65 (61%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
Q V+F +TR V+WL + VS+++G MD R++ + +FR + VL+ TD+ A
Sbjct: 687 QTVVFASTRHHVEWLHNLLEFEGVRVSSIYGSMDMMARKMALSKFRAKKADVLMVTDVAA 746
Query: 486 RGIDV 500
RGID+
Sbjct: 747 RGIDI 751
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+ LCD I Q +IF TR L SM+ + + + G M+ +R+ ++++F
Sbjct: 325 KIFPLCD-----KIGQTIIFVRTREGARRLHASMNASGYKCTVIEGQMEHSDRDRVVKEF 379
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G +++LI TD+L+RG+DV V
Sbjct: 380 RDGLTKILIATDVLSRGLDVSTV 402
Score = 38.7 bits (86), Expect = 0.13
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADV---QVILLSATMPDDVLEVSRCFMR 174
N +K+ V DEAD M++ G + + K LS QV+L SAT + V + +
Sbjct: 229 NNMKILVFDEADHMMATDGHRVDSTKILKHLSMSAKAWQVLLFSATFNEAVKSFATKVVP 288
Query: 175 DPVRILVQKEELTLEGIKQFYIAI 246
+ +I + EL+L+ IKQ + +
Sbjct: 289 NANQIFIPATELSLDVIKQHRVVV 312
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+++++ VLDEAD ML GF Q++ + L A+ Q +L SAT +V ++ R DPV
Sbjct: 221 DSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNVKDLCRVCTNDPVF 280
Query: 187 ILVQK--EELTLEGIKQFYIAIELEN 258
+ V + T + +KQ Y+ +E E+
Sbjct: 281 VSVHENASAATPDNLKQSYVIVEEEH 306
Score = 39.5 bits (88), Expect = 0.075
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM-HLRD-FTVSAMHGDMDQREREVI 428
E K+ L + ++++F ++ ++ +LTE+ LR V + G M+Q++R
Sbjct: 305 EHKINALWSFIEAHRKKKSLVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKRIET 364
Query: 429 MRQFRTGSSRVLITTDLLARGIDVQQV 509
+F + VLI TD+ +RG+D + +
Sbjct: 365 FTKFDESKAAVLIATDVASRGLDFEHI 391
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 58.4 bits (135), Expect = 2e-07
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHG---------DMD 407
E K L ++Y ++ + Q+VIF N+R L++ M + VS + G M
Sbjct: 322 EDKFNKLSEIYSSMIVGQSVIFVNSRETAFKLSQRMRDQGHAVSLLCGTLGPSSGPNSMT 381
Query: 408 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
R+ IM++F+ G ++VLI TD+LARGIDV QV
Sbjct: 382 PEIRDRIMKEFKDGETKVLICTDVLARGIDVPQV 415
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSR--GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 174
+ + + VLDEADE++++ Q+ + VQ++L SAT D+V +
Sbjct: 235 NVTNVVMLVLDEADELINQQNNMGPQVLQIRNFFRGPVQIVLFSATFSDNVYNFATKIAP 294
Query: 175 DPVRILVQKEELTLEGIKQFYI 240
I V++E+LTL+ I Q Y+
Sbjct: 295 RAHVIQVKREQLTLDCIDQRYM 316
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 58.4 bits (135), Expect = 2e-07
Identities = 24/69 (34%), Positives = 43/69 (62%)
Frame = +3
Query: 303 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 482
++++IF T+RKVD +T + + +HGD Q++R+ ++ FR S +L+ TD+
Sbjct: 349 SKSIIFVETKRKVDQITNVIKRNGWRCDGIHGDKTQKDRDYVLNTFRRLRSGILVATDVA 408
Query: 483 ARGIDVQQV 509
+RG+DV V
Sbjct: 409 SRGLDVDDV 417
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
VLDEAD ML GF+ QI + + D QV++ SAT P ++ +++ F+R+ ++I
Sbjct: 253 VLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKEIRKLAEEFLREYIQI 307
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 KLETLCD-LYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 437
K + L D L D S + ++F T+R D L +H V+++HGD Q +RE+ ++
Sbjct: 452 KRDHLLDILTDIDSDSLILVFVETKRGADALEGFLHTEGSCVASIHGDRSQSDRELALQS 511
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
FR GS+ +L+ T + ARG+D+ V
Sbjct: 512 FREGSTPILVATRVAARGLDIPNV 535
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLS----ADVQVILLSATMPDDVLEVSRCFMRDP 180
I+ VLDEAD ML GF+ QI + + + Q ++ SAT P ++ ++ F++D
Sbjct: 366 IRYLVLDEADRMLDMGFEPQIRKIVEQTNMPPPGQRQTLMFSATFPREIQMLASDFLKDY 425
Query: 181 VRILVQKEELTLEGIKQFYIAIE 249
+ + V K T + I Q + ++
Sbjct: 426 LFLRVGKVGSTSQNITQRIVYVD 448
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/78 (33%), Positives = 48/78 (61%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+K V+DEAD +L+ F+ ++ + K++ D + L SATM V ++ R +++PV+
Sbjct: 168 LKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCA 227
Query: 193 VQKEELTLEGIKQFYIAI 246
V + T+E ++Q+YI I
Sbjct: 228 VSSKYQTVEKLQQYYIFI 245
Score = 42.3 bits (95), Expect = 0.011
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+IFC+T + FT +HG M Q +R + +F+ + +L+ TD+ +RG
Sbjct: 267 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRG 326
Query: 492 IDVQQV 509
+D+ V
Sbjct: 327 LDIPHV 332
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 58.4 bits (135), Expect = 2e-07
Identities = 23/66 (34%), Positives = 42/66 (63%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
++F T++ D L + ++ + +++HGD QR+RE + QFR+G S +L+ T + ARG
Sbjct: 445 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 504
Query: 492 IDVQQV 509
+D+ V
Sbjct: 505 LDISNV 510
Score = 41.1 bits (92), Expect = 0.025
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFK---MLSADVQ-VILLSATMPDDVLEVSRCFMRDPV 183
K VLDEAD ML GF+ QI + + M V+ ++ SAT P ++ ++R F+ + +
Sbjct: 342 KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI 401
Query: 184 RILVQKEELTLEGIKQFYIAIE 249
+ V + T E I Q + +E
Sbjct: 402 FLAVGRVGSTSENITQKVVWVE 423
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/82 (32%), Positives = 48/82 (58%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
++K E L + S ++FC T+ V+++ + + VS ++G +DQ R+ +
Sbjct: 377 KFKKERLPPAHQLPSEKSTIVFCPTKHHVEYVIVLLQTLGYAVSYIYGTLDQHARKNQLY 436
Query: 435 QFRTGSSRVLITTDLLARGIDV 500
+FRTG + +L+ TD+ ARGIDV
Sbjct: 437 RFRTGKTSILVVTDVAARGIDV 458
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/80 (25%), Positives = 46/80 (57%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+++ DEAD + GF +Q++++ L ++ Q +L SAT+P ++E ++ + DP+ +
Sbjct: 246 SVEYICFDEADRLFELGFGEQMNELLASLPSNRQTLLFSATLPKTLVEFAKAGLHDPILV 305
Query: 190 LVQKEELTLEGIKQFYIAIE 249
+ E E ++ + A++
Sbjct: 306 RLDAETKLPEHLEMTFFAVK 325
>UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 419
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/83 (30%), Positives = 48/83 (57%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L ++ D + QA+IF + + + + + + + ++G M++ RE +F
Sbjct: 266 KQDKLGEILDEIDFNQAIIFADRKERCQAIVQRLKKEKYPCGILYGRMEEYLREREFERF 325
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G SR+L++TDL RGID+++V
Sbjct: 326 RKGESRILVSTDLCGRGIDIEKV 348
Score = 39.9 bits (89), Expect = 0.057
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 22 FVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQK 201
FV+DE D++LS + I +F S + QV++ SAT+ + + R ++++P + +
Sbjct: 186 FVIDECDKILSSKSELDIMSLFMSSSKNKQVMMFSATISEQNKALCRKYLKNPFEVFIDD 245
Query: 202 -EELTLEGI 225
E+L L G+
Sbjct: 246 GEKLFLHGL 254
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/67 (35%), Positives = 42/67 (62%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
AV+F NT++ D + + + R V +HGD+ R+R+ +M+Q R + ++ TDL AR
Sbjct: 249 AVVFTNTKKMADQVADGLMERGLKVGRIHGDLSPRDRKKMMKQIRDLEFQYIVATDLAAR 308
Query: 489 GIDVQQV 509
GID++ +
Sbjct: 309 GIDIEGI 315
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/85 (25%), Positives = 45/85 (52%)
Frame = +1
Query: 4 ANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 183
ANTI ++DEAD ML GF + + + ++Q+++ SAT+P + + +M +P
Sbjct: 151 ANTI---IVDEADLMLDMGFIHDVDKIAARMPKNLQMLVFSATIPQKLKPFLKKYMENPE 207
Query: 184 RILVQKEELTLEGIKQFYIAIELEN 258
I + +++ I+ + + + N
Sbjct: 208 HIHINPKQVAAGNIEHYLVPSKHRN 232
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/83 (31%), Positives = 46/83 (55%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+T+K VLDEADEML GF + + +F L Q +L SAT+P + E++ + +P
Sbjct: 165 STVKHLVLDEADEMLKLGFMEDLEVIFAALPESRQTVLFSATLPHSIREIAEKHLHEPQH 224
Query: 187 ILVQKEELTLEGIKQFYIAIELE 255
+ + + T+ I Q ++ + +
Sbjct: 225 VKIAAKTQTVARIDQAHLMVHAD 247
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+ F T++ L ++ + + +A++GD+ Q +RE ++ + G +++ TD+ ARG
Sbjct: 266 IAFVRTKQATLDLAGALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVVATDVAARG 325
Query: 492 IDVQQV 509
IDV ++
Sbjct: 326 IDVPRI 331
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/75 (40%), Positives = 42/75 (56%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I+ VLDEADEML GF D + V + Q+ L SATMP + V+ +R+P I
Sbjct: 150 IRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIALFSATMPKQIKAVAEKHLREPTEIR 209
Query: 193 VQKEELTLEGIKQFY 237
++ + T E I+Q Y
Sbjct: 210 IKSKTATNESIEQKY 224
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/83 (25%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L + +T ++F T++ + + + M A++GD+ Q +RE + +
Sbjct: 232 KNQALLRICETSEFDAMMVFVRTKQATEEVADYMRSHGLRCEALNGDVAQAQRERAVDRL 291
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ G +L+ TD+ ARG+DV+++
Sbjct: 292 KKGQVDMLVATDVAARGLDVERI 314
>UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein;
n=10; Alphaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9)
Length = 793
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +3
Query: 309 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 488
A++FC TR V+ L M R F V A+ G++ Q+ER ++ R G +RV I TD+ AR
Sbjct: 262 AIVFCKTRLAVNHLLARMGNRGFQVVALSGELSQQERTHALQALRDGRARVCIATDVAAR 321
Query: 489 GIDV 500
GID+
Sbjct: 322 GIDL 325
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/59 (33%), Positives = 37/59 (62%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
++ VLDEADEML GF++ + + + + ++ SAT+P ++ +++ F +D VRI
Sbjct: 164 LRAVVLDEADEMLDLGFREDLEFILGSAPEERRTLMFSATVPKEIEALAKEFQQDAVRI 222
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+IF T++ D L E ++ +F V+++HGD Q ERE +R FR G +L+ T + ARG
Sbjct: 569 LIFVETKKAADSLEEFLYNHNFPVTSIHGDRTQAEREEALRLFRCGRCPILVATAVAARG 628
Query: 492 IDVQQV 509
+D+ V
Sbjct: 629 LDIPNV 634
Score = 39.9 bits (89), Expect = 0.057
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFK----MLSADVQVILLSATMPDDVLEVSRCFMR 174
+ I+ VLDEAD ML GF+ QI + + ++ + Q ++ SAT P + E++ F+
Sbjct: 456 DNIRFLVLDEADRMLDMGFEPQIRRIVEESRMPVTGERQTLMFSATFPKAIQELASDFLY 515
Query: 175 DPVRILVQKEELTLEGIKQFYIAIE 249
+ + V + T I Q +E
Sbjct: 516 RYIFLAVGRVGSTSVNITQTIFWVE 540
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/68 (35%), Positives = 43/68 (63%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+ +IF + + D LT ++ R F +++HG+ Q +RE I+ FR+G VL+ TD+ A
Sbjct: 566 KVLIFSDLKSFADQLTSALRYRRFKSASLHGNKTQAQRERILNMFRSGDVNVLVATDVAA 625
Query: 486 RGIDVQQV 509
RG+D++ +
Sbjct: 626 RGLDIKDI 633
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR-DPV 183
N + FV+DEAD ML GF+ QI + + D Q ++ SAT P ++ ++ F + + +
Sbjct: 464 NRVSYFVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPSEIKRLASEFCKANSI 523
Query: 184 RILVQKEELT 213
I V ELT
Sbjct: 524 YIQVGDLELT 533
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/102 (31%), Positives = 52/102 (50%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
EW + L S +IF + + L ++ DF V+ +HGDMDQ ER ++
Sbjct: 339 EWLTQNLVSF---ASAGSVLIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLG 395
Query: 435 QFRTGSSRVLITTDLLARGIDVQQVPASSTMICHPTVKIIFT 560
QF+ +L+ TD+ ARG+D +P+ T+I + + I T
Sbjct: 396 QFKKREIPILVATDVAARGLD---IPSIKTVINYDVARDITT 434
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+ V DEAD M GF+ Q+ + + D Q +L SAT V + R + DPVR++
Sbjct: 254 VTYLVFDEADRMFDMGFEPQVRSIANNVRPDRQTLLFSATFKKKVEHLCRDILVDPVRVV 313
Query: 193 V 195
+
Sbjct: 314 I 314
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/81 (33%), Positives = 45/81 (55%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
N + VLDEAD +L GF+ QIH++ D Q ++SAT P+ + +++ + P+
Sbjct: 818 NRVSFVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISATFPNYIQNLAKKLLYKPIE 877
Query: 187 ILVQKEELTLEGIKQFYIAIE 249
I+V ++ T I QF +E
Sbjct: 878 IIVGEKGKTNNNIYQFVEVLE 898
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/66 (33%), Positives = 40/66 (60%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
+IF N + + D L + D+ +HG DQ +RE ++ F+ G +++LI T ++ARG
Sbjct: 920 LIFVNRQLEADLLYLELFKYDYKTLVLHGGQDQADREFTLQTFKEGKNKILIATSVMARG 979
Query: 492 IDVQQV 509
ID++ +
Sbjct: 980 IDIKDI 985
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/80 (33%), Positives = 49/80 (61%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 186
+T+++ VLDEAD ML GF D+++++ + Q +L SATM D V ++ R + PVR
Sbjct: 935 DTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVR 994
Query: 187 ILVQKEELTLEGIKQFYIAI 246
++V ++ T + Q ++ +
Sbjct: 995 LMVDTKKNTAVTLVQEFVRL 1014
Score = 41.5 bits (93), Expect = 0.019
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
+L L L + + ++F +++ + L + +HG M Q +R + F
Sbjct: 1022 RLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIVFGLLGLKAAELHGSMSQEQRIKSVESF 1081
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G+ L+ TDL +RG+D++ V
Sbjct: 1082 RDGNVNFLLATDLASRGLDIKGV 1104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,265,673
Number of Sequences: 1657284
Number of extensions: 13292640
Number of successful extensions: 34097
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 31571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33929
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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