Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0239
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 1e-33
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 1e-33
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 85 5e-17
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 61 9e-10
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 61 9e-10
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 56 3e-08
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 53 2e-07
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 53 2e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 51 8e-07
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 50 1e-06
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 49 4e-06
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 49 4e-06
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 48 7e-06
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 48 7e-06
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 48 9e-06
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 47 1e-05
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 47 2e-05
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 43 2e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 43 3e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 34 0.001
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 40 0.002
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 40 0.002
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 39 0.004
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 38 0.010
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 37 0.018
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_24384| Best HMM Match : I-set (HMM E-Value=4.3e-31) 31 0.87
SB_25218| Best HMM Match : zf-AD (HMM E-Value=0.094) 29 2.7
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 2.7
SB_55747| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_28158| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 29 3.5
SB_2355| Best HMM Match : Carn_acyltransf (HMM E-Value=0) 29 3.5
SB_47833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 29 3.5
SB_27380| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_1067| Best HMM Match : Trigger_C (HMM E-Value=0.73) 28 6.2
SB_17612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7) 28 8.1
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 140 bits (339), Expect = 1e-33
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
+WKL+TLCDLY+TL+I QAVIF NTRRKVDWL M +D TVS+MHGDM Q+ER++IM+
Sbjct: 315 DWKLDTLCDLYETLTITQAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMK 374
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+FR+GSSRVLITTDLLARGIDV QV
Sbjct: 375 EFRSGSSRVLITTDLLARGIDVHQV 399
Score = 131 bits (316), Expect = 6e-31
Identities = 65/94 (69%), Positives = 77/94 (81%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
IKLFVLDEADEMLSRGFKDQI+DVF L VQV+LLSATMP DVLEV+ FMRD VRIL
Sbjct: 234 IKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRIL 293
Query: 193 VQKEELTLEGIKQFYIAIELENGSWKLCVTCMIH 294
V++EE+TLEGIKQF++ +E E+ WKL C ++
Sbjct: 294 VKREEVTLEGIKQFFVLVEKED--WKLDTLCDLY 325
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 509 SCVINYDLPSNRENY 553
S VINYDLPSNRENY
Sbjct: 400 SLVINYDLPSNRENY 414
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 140 bits (339), Expect = 1e-33
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
EWK +TLCDLYDTL+I QAVIFCNT+RKVDWLTE M +FTV++MHGDM Q+ERE IM+
Sbjct: 221 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMK 280
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
FR G SRVLI+TD+ ARG+DVQQV
Sbjct: 281 DFRAGQSRVLISTDVWARGLDVQQV 305
Score = 117 bits (282), Expect = 8e-27
Identities = 53/95 (55%), Positives = 76/95 (80%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+IK+ VLDEADEML++GFK+QI+DV++ L QV+LLSAT+P ++LE++ FM DP+RI
Sbjct: 139 SIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRI 198
Query: 190 LVQKEELTLEGIKQFYIAIELENGSWKLCVTCMIH 294
LV+++ELTLEGIKQF++A+E E WK C ++
Sbjct: 199 LVKRDELTLEGIKQFFVAVERE--EWKFDTLCDLY 231
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/59 (44%), Positives = 28/59 (47%)
Frame = +2
Query: 509 SCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTGS*QESTGRDIEDFYHTSIVEMP 685
S VINYDLP+NRE Y NFV S RDIE +Y T I EMP
Sbjct: 306 SLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK-SDDIRILRDIEQYYSTQIDEMP 363
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = +3
Query: 255 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 434
E K E LC++Y LSI Q V+FC+TRR WL E M V+ + G++ +R ++
Sbjct: 329 EDKFEALCNMYGVLSIGQCVVFCHTRRNAAWLAEKMVKEGHAVALLSGEITIEQRIAVLE 388
Query: 435 QFRTGSSRVLITTDLLARGIDVQQV 509
+FR G ++LITT++ ARGIDV+QV
Sbjct: 389 RFRLGKEKLLITTNVSARGIDVEQV 413
Score = 64.9 bits (151), Expect = 6e-11
Identities = 35/98 (35%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +1
Query: 13 IKLFVLDEADEMLS-RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
+ +FVLDEAD M++ +G +DQ + K L D QV+L SAT +DV++ + + +P+ I
Sbjct: 247 VSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVLLFSATYDEDVMKFAETVVPNPIII 306
Query: 190 LVQKEELTLEGIKQFYIAIELENGSWKLCVTCMIHCLL 303
+++EE +L+ IKQ+Y+ +N K C ++ +L
Sbjct: 307 RLRREEESLDNIKQYYVV--CKNSEDKFEALCNMYGVL 342
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 60.9 bits (141), Expect = 9e-10
Identities = 30/83 (36%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+ L L+ L I Q++IFCN+ ++V+ L + F+ +H M Q R + F
Sbjct: 278 KVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFHDF 337
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G R L+ +DL RGID+Q V
Sbjct: 338 RQGHCRNLVCSDLFTRGIDIQSV 360
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/78 (37%), Positives = 46/78 (58%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
++ V+DEAD++LS FK + + K L + Q++L SAT P V + +R P I +
Sbjct: 198 QMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL 257
Query: 196 QKEELTLEGIKQFYIAIE 249
+ELTL G+ Q+Y +E
Sbjct: 258 M-DELTLHGVTQYYAFVE 274
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 60.9 bits (141), Expect = 9e-10
Identities = 30/83 (36%), Positives = 45/83 (54%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K+ L L+ L I Q++IFCN+ ++V+ L + F+ +H M Q R + F
Sbjct: 278 KVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFHDF 337
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G R L+ +DL RGID+Q V
Sbjct: 338 RQGHCRNLVCSDLFTRGIDIQSV 360
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/78 (37%), Positives = 46/78 (58%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
++ V+DEAD++LS FK + + K L + Q++L SAT P V + +R P I +
Sbjct: 198 QMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL 257
Query: 196 QKEELTLEGIKQFYIAIE 249
+ELTL G+ Q+Y +E
Sbjct: 258 M-DELTLHGVTQYYAFVE 274
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/68 (35%), Positives = 44/68 (64%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+ +IF T+++ + L + L+ T +HGD+ Q++REV ++ FR G R L+ TD+ A
Sbjct: 307 RTMIFAQTKKEANELALNSVLKQET-QVLHGDIPQKQREVTLKSFREGKFRCLVATDVAA 365
Query: 486 RGIDVQQV 509
RG+D+ ++
Sbjct: 366 RGLDIPEI 373
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/83 (31%), Positives = 44/83 (53%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L + + ++F ++R D+L + F +++HGD Q+ERE + F
Sbjct: 949 KRDRLTQILGDAGTDRTLVFVESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREEALDDF 1008
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G VLI T++ ARG+D+ V
Sbjct: 1009 RKGRCPVLIATNVAARGLDIDDV 1031
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKML----SADVQVILLSATMPDDVLEVSRCFMRDP 180
++ +LDEAD ML GF+ I + + + ++ Q ++ SAT P+++ ++ F+ D
Sbjct: 863 LQFLILDEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFSATFPEEIQRLAGDFLNDY 922
Query: 181 VRILVQKEELTLEGIKQFYIAI 246
+ + V + T I+Q I +
Sbjct: 923 LFLTVGRVGGTTSDIEQTVIEV 944
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/73 (32%), Positives = 41/73 (56%)
Frame = +3
Query: 291 TLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLIT 470
+L + Q +IF + VD + E + L+ A+HGD Q ER +R+F G+ VL+
Sbjct: 84 SLDVIQVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVA 143
Query: 471 TDLLARGIDVQQV 509
TD+ ++G+D +
Sbjct: 144 TDVASKGLDFPDI 156
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
+ VLDEAD M+ GF++ + +F + Q +L SATMP + ++ + PV + V
Sbjct: 18 RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNV 77
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQ-AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 437
K L DL + Q ++F T++ D L + + +++HGD QRERE +R
Sbjct: 1086 KRSFLLDLLNASGPQQLTLVFVETKKGADALEMFLAKDGYYCTSIHGDRSQREREEALRT 1145
Query: 438 FRTGSSRVLITTDLLARGIDVQQV 509
FR G + +L+ T + ARG+D+ V
Sbjct: 1146 FRCGDTPILVATAVAARGLDIPNV 1169
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +1
Query: 7 NTIKLFVLDEADEMLSRGFKDQIH---DVFKMLSADV-QVILLSATMPDDVLEVSRCFMR 174
++I+ VLDEAD ML GF+ QI D M + Q ++ SAT P ++ ++R F+
Sbjct: 998 DSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLE 1057
Query: 175 DPVRILVQKEELTLEGIKQFYIAIE 249
+ + + V K T E I Q + ++
Sbjct: 1058 NYIFLAVGKVGSTSENITQKVVWVD 1082
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/73 (32%), Positives = 41/73 (56%)
Frame = +3
Query: 291 TLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLIT 470
+L + Q +IF + VD + E + L+ A+HGD Q ER +R+F G+ VL+
Sbjct: 84 SLDVIQVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVA 143
Query: 471 TDLLARGIDVQQV 509
TD+ ++G+D +
Sbjct: 144 TDVASKGLDFPDI 156
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
+ VLDEAD M+ GF++ + +F + Q +L SATMP + ++ + PV + V
Sbjct: 18 RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNV 77
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/84 (32%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM-RDPVRI 189
++ V+DEAD +L GF++++ + ++L + Q +L SAT +V ++++ + R P+ +
Sbjct: 720 LQCLVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSATQTKNVEDLAKLSLKRSPLYV 779
Query: 190 LV--QKEELTLEGIKQFYIAIELE 255
V KE T+EG++Q YI + E
Sbjct: 780 GVDDHKETSTVEGLEQGYIVVPSE 803
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/68 (27%), Positives = 38/68 (55%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+ ++F ++ V + +E ++ D V +HG Q++R +F S +L+ TD+ A
Sbjct: 820 KVMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAA 879
Query: 486 RGIDVQQV 509
RG+D+ +V
Sbjct: 880 RGLDIPEV 887
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 51.2 bits (117), Expect = 8e-07
Identities = 26/83 (31%), Positives = 44/83 (53%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K L DL D L Q +IF + ++ L+ + ++F +H M Q ER +QF
Sbjct: 322 KNRKLFDLLDLLEFNQVIIFVKSVQRCTALSHLLLKQNFPAICIHRGMKQEERLARYQQF 381
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
+ R+L+ T+L RG+D+++V
Sbjct: 382 KNFEKRMLVATNLFGRGMDIERV 404
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/83 (27%), Positives = 44/83 (53%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
K + L + T ++F ++ + VD++TE + F S +H + Q R +++ F
Sbjct: 319 KPQKLLETLRTTPYPPVIVFTSSIQNVDYVTELLKQEQFHASGLHSEKPQDYRFKLVKAF 378
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
R G +L+ TD+ +RG+D +V
Sbjct: 379 RDGKVDILVATDVASRGLDFPEV 401
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ---VILLSATMP-DDVLEVSRCFMRD 177
+IK+ VLDEADEML++GFK+QI+DV++ L Q V L ++P + L + C D
Sbjct: 35 SIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQNSYVEYLHESVPKSEPLSSNSCSPGD 94
Query: 178 PV 183
P+
Sbjct: 95 PL 96
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
VLDEAD ML GF+ QI + + D Q ++ SAT P +V ++ F+ D V I V
Sbjct: 211 VLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSL 270
Query: 205 ELT 213
LT
Sbjct: 271 GLT 273
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
+++ VLDEAD ML GF I V L A Q +L SAT DD+ ++ + +P+ I
Sbjct: 4 VEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIE 63
Query: 193 VQKEELTLEGIKQ 231
V + + + Q
Sbjct: 64 VARRNTASDQVLQ 76
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 204
V+DE D ML GF+ Q+ + + LS Q +L SAT+P + ++ + PV I
Sbjct: 284 VVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSATIPPSIEAMASRLLNAPVFISAGSP 343
Query: 205 ELTLEGIKQFYIAIE 249
L + +KQ + +E
Sbjct: 344 SLPTKAVKQLILWVE 358
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/70 (28%), Positives = 43/70 (61%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 189
++++F+LDEAD++L F+ QI+ +F L + Q++ SAT P+ + + +M +P +
Sbjct: 155 SVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPEVLANHLKKYMTEPTFV 214
Query: 190 LVQKEELTLE 219
+ + +L+
Sbjct: 215 RLNAADPSLQ 224
Score = 34.3 bits (75), Expect = 0.094
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 396 GDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
G Q +R M + ++ R+LI+TDL ARGID + V
Sbjct: 246 GSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENV 283
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
++F +T + L H T +H + Q ER + +F++G+ ++L+ TD+ +RG
Sbjct: 251 IVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFKSGTIKILVATDVASRG 310
Query: 492 IDVQQV 509
+D+ QV
Sbjct: 311 LDIPQV 316
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 192
I+ VLDEAD +L F D + +F + Q +L SAT+ D + E+ + P
Sbjct: 151 IQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSATLTDTMGELQKMSGSQPFSYE 210
Query: 193 VQKEELTLEGIKQFYI 240
VQ + T+ + Q Y+
Sbjct: 211 VQSDIATVAELDQRYL 226
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 440
KL + D+ +IF ++ + L + V +H D Q +R+ I++ F
Sbjct: 370 KLLAVRDIVQKGFTPPVLIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSF 429
Query: 441 RTGSSRVLITTDLLARGIDVQQV 509
RTG VLI T+L+ RGID + V
Sbjct: 430 RTGKIWVLIATELMGRGIDFKGV 452
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 294 LSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 473
+S +IF + + L ++ DF V+ +HGDMDQ ER ++ QF+ +L+ T
Sbjct: 727 ISAGSVLIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQFKKREIPILVAT 786
Query: 474 DL 479
D+
Sbjct: 787 DV 788
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
++F T+ L + L +HG++ Q +R +++F+ G +L+ TDL ARG
Sbjct: 12 LVFLQTKWMAHKLRIVLGLMGLNADELHGNLTQLQRLEALQKFKNGEVDILVATDLAARG 71
Query: 492 IDVQQVPASSTM 527
+D+ V S ++
Sbjct: 72 LDITGVKNSKSV 83
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +3
Query: 306 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
+ ++F NT V LT + L +H M QR+R + +F+ ++ +L+ TD+ A
Sbjct: 458 RTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATDVAA 517
Query: 486 RGIDVQQV 509
RG+D+ +
Sbjct: 518 RGLDIANI 525
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKML----SADVQVILLSATMPDDVLEVSRCFMRDP 180
++ V+DEAD M+ +G +++ + +++ S +++V A P + R R+
Sbjct: 340 LRYLVIDEADRMVEQGHYEELSSILELIHLKKSGNMEVDQEDAERPSNSSSEKRYIQRN- 398
Query: 181 VRILVQKEEL 210
ILVQK L
Sbjct: 399 --ILVQKSSL 406
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 369 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
+ F + +HG +Q +RE + + GS +L+ TD+ RGID++ V
Sbjct: 307 KKFRATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDV 353
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 34.3 bits (75), Expect(2) = 0.001
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 261 KLETLCDLY--DTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDM 404
K E + +L D+ S Q ++FCN+ DWL + + ++ +HG++
Sbjct: 639 KAERIVELLKKDSKSPGQTIVFCNSASSCDWLARHLEQHNLSLIRLHGNI 688
Score = 25.4 bits (53), Expect(2) = 0.001
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 396 GDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
G+ R R +F+ ++ +L+ TD+ +RG+D V
Sbjct: 728 GNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDV 765
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +3
Query: 366 LRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDV 500
L V A+H +D E++++M +F G S+VLI+T ++ G+DV
Sbjct: 90 LAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDV 134
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/36 (38%), Positives = 27/36 (75%)
Frame = +3
Query: 402 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQV 509
++Q +RE + F+TG +R+LI TD+ +RG+D++ +
Sbjct: 76 LEQYDREQALDDFKTGLARILIATDVASRGLDIKDI 111
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 58 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
GF+ +I + + D Q ++ SAT P V ++ +M DPVR+ V
Sbjct: 2 GFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFV 47
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +3
Query: 312 VIFCNTRRKVDWLTESM--HLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 485
++F +T V++ ++++ L + + A+HG M + R I FR S +L+ TD++A
Sbjct: 93 MVFFSTCACVNYFSKALTKFLPNVHIMALHGKM-KSNRHKIFDSFRKLESGILVCTDVMA 151
Query: 486 RGIDVQQV 509
RG+D+ +V
Sbjct: 152 RGVDIPEV 159
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 58 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELT 213
GF+ I+ + L + L SAT D+V + R +R+PVR+ V +E+LT
Sbjct: 2 GFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTV-REKLT 52
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +1
Query: 1 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV----QVILLSATMPDDVLEVSRCF 168
+ +I+ +LDEAD ML GF IH + + + Q ++ SAT PD++ ++ F
Sbjct: 623 YLGSIQHLILDEADRMLDLGFGPDIHKLIEESNMTAKESRQTLMFSATFPDEIQHLAGSF 682
Query: 169 MR-DPVRILVQKEELTLEGIKQFYIAIELENGSWK 270
++ D + + V + T I Q I + NGS K
Sbjct: 683 LKPDYLFLAVGRVGGTNLDITQHVITV---NGSEK 714
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = +1
Query: 10 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 183
++++ VLDEAD +L GF ++ + + L ++ Q +L SAT V +++R ++ V
Sbjct: 196 SLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSATQTRSVKDLARLSLQSYV 253
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 303 AQAVIFCNTRRKVDWLTESMHLRD--FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTD 476
++ ++F ++ ++V ++ E + A++G Q +R I +F + VL TD
Sbjct: 274 SKILVFVSSCKQVKFIYEGFRRLQPGIPLMALYGKQKQLKRVAIYDEFCKKTQCVLFATD 333
Query: 477 LLARGI 494
+ ARG+
Sbjct: 334 IAARGL 339
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +3
Query: 261 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDM---DQREREVIM 431
K + L +Y++ + A++F + VD + +A++ + D + +
Sbjct: 412 KAQVLAKIYESSNQKSALVFIHRNHSVDDFVWELRYLGLNAAALYKQVAIPDPTKYHKFL 471
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
R FRTG ++L+ T+ RG+D +++
Sbjct: 472 RDFRTGQIQLLVGTEETVRGLDFKEL 497
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +3
Query: 414 EREVIMRQFRTGSSRVLITTDLLARGIDV 500
E+EVI++ FRTG ++LI+T +L G+DV
Sbjct: 605 EQEVILKSFRTGRIKLLISTSVLEEGLDV 633
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Frame = +1
Query: 25 VLDEADEMLSRGFKDQIHD--------VFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 180
VLDEAD M GF+ QI + + D Q ++ SAT P + ++R + P
Sbjct: 226 VLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPDRQTVMFSATFPRQMEALARKILDKP 285
Query: 181 VRILVQKEELTLEGIKQFYIAIELEN 258
+ I V + ++Q +A+ L++
Sbjct: 286 IEIQVGGRSVVCSDVEQ-NVALGLQD 310
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 354 ESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSS-RVLITTDLLARGIDV 500
E M LR S G M QRE+E ++ +FR GS ++I T + G+D+
Sbjct: 583 ELMPLRLVGNSDGRGGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDI 632
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 381 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVPASSTMICHPT 542
V+ H + ER++I FR G+ RVL+ T L G++ +PA +I PT
Sbjct: 557 VAFHHAGLTFDERDIIEGAFRQGTIRVLVATSTLCSGVN---LPARRVIIRTPT 607
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 384 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDV 500
S ++ +DQ R + + +F+ + V++ TD+ ARGID+
Sbjct: 503 SYVYSSLDQTARTINVGKFQHKKTMVMVVTDVAARGIDI 541
>SB_24384| Best HMM Match : I-set (HMM E-Value=4.3e-31)
Length = 1399
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = -3
Query: 358 DSVSQSTLRRVLQKITACAIDSVSYRSH--RVSSFH--SLIQLQC 236
+SV +T + +++ TAC ID++ + SH ++ F S++Q+QC
Sbjct: 709 NSVGTATAQVIIKVFTACRIDNIPFGSHEPKLQFFRVGSVVQVQC 753
>SB_25218| Best HMM Match : zf-AD (HMM E-Value=0.094)
Length = 436
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 234 KLFNTFQGKLFLLYKYAYRISHKASRYFQYIIRHG 130
+L T GK FLL Y YR S K + +F + R G
Sbjct: 387 RLMETQSGKHFLLIVYIYRESRKVTVHFGHDYRKG 421
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 13 IKLFVLDEADEMLSRGFKDQIHDVFKML 96
+K F+LDEAD +L++G D I ++ +
Sbjct: 160 VKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_55747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 288 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 377
+T +A+ + FC T RK+DW + + DF
Sbjct: 8 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 37
>SB_28158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 288 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 377
+T +A+ + FC T RK+DW + + DF
Sbjct: 87 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 116
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 432 RQFRTGSSRVLITTDLLARGIDVQQV 509
+QF+ R+L+ T+L RG+D+++V
Sbjct: 6 QQFKNFEKRMLVATNLFGRGMDIERV 31
>SB_2355| Best HMM Match : Carn_acyltransf (HMM E-Value=0)
Length = 1559
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 288 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 377
+T +A+ + FC T RK+DW + + DF
Sbjct: 87 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 116
>SB_47833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 288 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 377
+T +A+ + FC T RK+DW + + DF
Sbjct: 87 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 116
>SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 785
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 288 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 377
+T +A+ + FC T RK+DW + + DF
Sbjct: 287 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 316
>SB_27380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 288 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 377
+T +A+ + FC T RK+DW + + DF
Sbjct: 8 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 37
>SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1455
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 288 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 377
+T +A+ + FC T RK+DW + + DF
Sbjct: 51 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 80
>SB_1067| Best HMM Match : Trigger_C (HMM E-Value=0.73)
Length = 639
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Frame = -3
Query: 532 QIIVDDAGTCCTSIPRANKSVVIKTREEPVRNCLM--ITSRSR*SMSPCIADTVKSR--R 365
Q I D G C +I + + + + C + I + ++ C + R +
Sbjct: 386 QAIEDHRGVCAEAIDECALQAIDECALQAIDECALQAIDECALQAIDECALQAIDERALQ 445
Query: 364 CIDS-VSQSTLRRVLQKITACAIDSV 290
ID V Q+ RVLQ I CA+ ++
Sbjct: 446 AIDERVLQAIAERVLQAIDECALQAI 471
>SB_17612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -3
Query: 517 DAGTCCTSIPRANKSVVI--KTRE-EPVRNCLMITSRSR*SMSPCIADTVKSRRCIDSVS 347
+ G T I A++++++ KT+E +P ++TS+ R C++D + R I V
Sbjct: 286 NGGQHITDITNASRTMLLNLKTQEWDPYLCKFLVTSKQR-LWDKCVSDVERQRTPIIDVD 344
Query: 346 QSTLRRVLQKITACAIDSV 290
L + + C I S+
Sbjct: 345 NLALDFISSNVANCDISSL 363
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/81 (24%), Positives = 42/81 (51%)
Frame = +1
Query: 16 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 195
KL DE ++ S +++H+ +K LSADV+ + S + +E + + +++ +
Sbjct: 4458 KLLAEDEKPKVASAS--EEVHEKWKALSADVENLAKSMFSAQERVEAFNLRLEE-MKVWL 4514
Query: 196 QKEELTLEGIKQFYIAIELEN 258
++ E LE + + +E EN
Sbjct: 4515 KETEEKLEAFEP--VGVEPEN 4533
>SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7)
Length = 325
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 280 TCMIHCLLHKL*FSATPVARWIG 348
T + C+L + FSA P +RW+G
Sbjct: 281 TARVSCMLQREMFSAFPCSRWLG 303
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,738,641
Number of Sequences: 59808
Number of extensions: 452333
Number of successful extensions: 1151
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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