Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0239
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    60   9e-11
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         27   0.55 
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   2.2  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 59.7 bits (138), Expect = 9e-11
 Identities = 26/66 (39%), Positives = 41/66 (62%)
 Frame = +3

Query: 312 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 491
           ++F  T+R  D+L   M    F  +++HGD  QRERE+ +  F++G   VLI T + ARG
Sbjct: 427 LVFVETKRNADYLASLMSETQFPTTSIHGDRLQREREMALYDFKSGRMDVLIATSVAARG 486

Query: 492 IDVQQV 509
           +D++ V
Sbjct: 487 LDIKNV 492



 Score = 34.3 bits (75), Expect = 0.004
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +1

Query: 13  IKLFVLDEADEMLSRGFKDQIHDVFKMLS----ADVQVILLSATMPDDVLEVSRCFMRDP 180
           +   VLDEAD ML  GF   I  V    +       Q ++ SAT P ++ E++  F+ + 
Sbjct: 324 VNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNY 383

Query: 181 VRILV 195
           + + V
Sbjct: 384 ICVFV 388


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = +3

Query: 402 MDQREREVIMRQFRTGSSRVLITTDLLARGIDV 500
           ++ R++E ++++FR     +LI T +L  GI++
Sbjct: 595 IEHRKQEEVLKRFRMHECNLLIGTSVLEEGIEL 627


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +1

Query: 337 RWIGSLNLCICVTLLYLLCMETWINVSVK*S*GSFVLALLVS*SPLI 477
           R IG   + ICV +++LLC    + +++  +  S ++  +V  S L+
Sbjct: 305 REIGLATMLICVVIVFLLCNLPAMMINIVEAFYSLIIEYMVKVSNLL 351


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -1

Query: 165 ASRYFQYIIRHGSRE*YDLNIS*QHLEDIMDLV 67
           A +YF Y+  HG +  Y++ ++        DL+
Sbjct: 788 AHKYFTYLSVHGDKTRYNIALAETEANQCQDLL 820


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,630
Number of Sequences: 2352
Number of extensions: 14451
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)