Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0238
         (623 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC122553-1|AAI22554.2|  496|Homo sapiens T-box 15 protein.             31   4.4  
AL357045-3|CAI43068.1|  496|Homo sapiens T-box 15 protein.             31   4.4  
AL357045-2|CAI43067.1|  330|Homo sapiens T-box 15 protein.             31   4.4  
AL357045-1|CAI43066.1|  602|Homo sapiens T-box 15 protein.             31   4.4  
AL139420-3|CAI22503.1|  602|Homo sapiens T-box 15 protein.             31   4.4  
AK096396-1|BAC04776.1|  287|Homo sapiens protein ( Homo sapiens ...    31   4.4  

>BC122553-1|AAI22554.2|  496|Homo sapiens T-box 15 protein.
          Length = 496

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 10/23 (43%), Positives = 19/23 (82%)
 Frame = +2

Query: 389 SKLEKSTYNIFNLDNNFNIWGHN 457
           S +++S+YN F+L N +N++G+N
Sbjct: 393 SHMQQSSYNAFSLHNPYNLYGYN 415


>AL357045-3|CAI43068.1|  496|Homo sapiens T-box 15 protein.
          Length = 496

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 10/23 (43%), Positives = 19/23 (82%)
 Frame = +2

Query: 389 SKLEKSTYNIFNLDNNFNIWGHN 457
           S +++S+YN F+L N +N++G+N
Sbjct: 393 SHMQQSSYNAFSLHNPYNLYGYN 415


>AL357045-2|CAI43067.1|  330|Homo sapiens T-box 15 protein.
          Length = 330

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 10/23 (43%), Positives = 19/23 (82%)
 Frame = +2

Query: 389 SKLEKSTYNIFNLDNNFNIWGHN 457
           S +++S+YN F+L N +N++G+N
Sbjct: 227 SHMQQSSYNAFSLHNPYNLYGYN 249


>AL357045-1|CAI43066.1|  602|Homo sapiens T-box 15 protein.
          Length = 602

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 10/23 (43%), Positives = 19/23 (82%)
 Frame = +2

Query: 389 SKLEKSTYNIFNLDNNFNIWGHN 457
           S +++S+YN F+L N +N++G+N
Sbjct: 499 SHMQQSSYNAFSLHNPYNLYGYN 521


>AL139420-3|CAI22503.1|  602|Homo sapiens T-box 15 protein.
          Length = 602

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 10/23 (43%), Positives = 19/23 (82%)
 Frame = +2

Query: 389 SKLEKSTYNIFNLDNNFNIWGHN 457
           S +++S+YN F+L N +N++G+N
Sbjct: 499 SHMQQSSYNAFSLHNPYNLYGYN 521


>AK096396-1|BAC04776.1|  287|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39077 fis, clone NT2RP7017795, highly similar to
           TBX15 PROTEIN. ).
          Length = 287

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 10/23 (43%), Positives = 19/23 (82%)
 Frame = +2

Query: 389 SKLEKSTYNIFNLDNNFNIWGHN 457
           S +++S+YN F+L N +N++G+N
Sbjct: 184 SHMQQSSYNAFSLHNPYNLYGYN 206


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,242,926
Number of Sequences: 237096
Number of extensions: 1663931
Number of successful extensions: 2054
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2054
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)