Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0238
(623 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 1.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 24 1.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 1.8
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 22 4.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 4.2
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 4.2
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 4.2
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 4.2
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 4.2
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 4.2
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.8
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.8
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.8
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 9.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.8
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 386 LSKLEKSTYNIFNLDNNFNIWGHNNSVYRTGIFYS 490
+S L +T + N N+N +NN+ Y ++Y+
Sbjct: 81 ISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYN 115
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 386 LSKLEKSTYNIFNLDNNFNIWGHNNSVYRTGIFYS 490
+S L +T + N N+N +NN+ Y ++Y+
Sbjct: 81 ISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYN 115
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 404 STYNIFNLDNNFNIWGHNNSVYRTGIFYS 490
+ YN N +NN+N + +NN ++Y+
Sbjct: 327 NNYNNNNYNNNYNNYNNNNYNNYKKLYYN 355
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +3
Query: 153 NELPQKCFLGLFMKRVGFKDSGLLFMEQ 236
N+ C++ +K+VGF ++ F E+
Sbjct: 55 NDEKLACYVDCMLKKVGFVNADTTFNEE 82
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 416 IFNLDNNFNIWGHNNSVYR 472
I +L NN+N +NN+ Y+
Sbjct: 82 ISSLSNNYNYSNYNNNNYK 100
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 416 IFNLDNNFNIWGHNNSVYR 472
I +L NN+N +NN+ Y+
Sbjct: 82 ISSLSNNYNYSNYNNNNYK 100
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 416 IFNLDNNFNIWGHNNSVYR 472
I +L NN+N +NN+ Y+
Sbjct: 82 ISSLSNNYNYSNYNNNNYK 100
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 416 IFNLDNNFNIWGHNNSVYR 472
I +L NN+N +NN+ Y+
Sbjct: 82 ISSLSNNYNYSNYNNNNYK 100
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 416 IFNLDNNFNIWGHNNSVYR 472
I +L NN+N +NN+ Y+
Sbjct: 82 ISSLSNNYNYSNYNNNNYK 100
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 416 IFNLDNNFNIWGHNNSVYR 472
I +L NN+N +NN+ Y+
Sbjct: 82 ISSLSNNYNYSNYNNNNYK 100
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 535 YKKCLSLFQRYNRLV*IKYSRS 470
Y+K LS F RY +L +YS+S
Sbjct: 424 YQKILSYFLRYKKLQ-PQYSQS 444
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/22 (27%), Positives = 12/22 (54%)
Frame = -2
Query: 559 WHNSKVYRYKKCLSLFQRYNRL 494
W N +Y+YK + + +R+
Sbjct: 313 WSNFPIYKYKYIREIMNKESRI 334
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/22 (27%), Positives = 12/22 (54%)
Frame = -2
Query: 559 WHNSKVYRYKKCLSLFQRYNRL 494
W N +Y+YK + + +R+
Sbjct: 313 WSNFPIYKYKYIREIMNKESRI 334
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 404 STYNIFNLDNNFN 442
S YN +N +NN+N
Sbjct: 92 SNYNNYNNNNNYN 104
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 404 STYNIFNLDNNFN 442
S YN +N +NN+N
Sbjct: 92 SNYNNYNNNNNYN 104
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 404 STYNIFNLDNNFN 442
S YN +N +NN+N
Sbjct: 92 SNYNNYNNNNNYN 104
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 404 STYNIFNLDNNFN 442
S YN +N +NN+N
Sbjct: 92 SNYNNYNNNNNYN 104
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 404 STYNIFNLDNNFN 442
S YN +N +NN+N
Sbjct: 92 SNYNNYNNNNNYN 104
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 404 STYNIFNLDNNFN 442
S YN +N +NN+N
Sbjct: 92 SNYNNYNNNNNYN 104
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 404 STYNIFNLDNNFN 442
S YN +N +NN+N
Sbjct: 92 SNYNNYNNNNNYN 104
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 404 STYNIFNLDNNFN 442
S YN +N +NN+N
Sbjct: 92 SNYNNYNNNNNYN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,864
Number of Sequences: 438
Number of extensions: 4391
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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