Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0237
         (649 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    35   2.0  
UniRef50_A5CDV8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_Q0FEW3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    33   7.9  

>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +3

Query: 375 SNRNALLLHGRNGQGDSTYPCGL 443
           + RNALL+HG NG G+STY  GL
Sbjct: 112 TKRNALLVHGFNGSGNSTYMRGL 134


>UniRef50_A5CDV8 Cluster: Putative uncharacterized protein; n=1;
           Orientia tsutsugamushi Boryong|Rep: Putative
           uncharacterized protein - Orientia tsutsugamushi (strain
           Boryong) (Rickettsia tsutsugamushi)
          Length = 608

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = -2

Query: 636 PSRYMEGYPCNGFSYINKNSMIATPRSSLARSSNNFLVTLLLSKAPPLK 490
           PS Y+  +PC  F+Y +++    TP + L++   +  + ++  + P LK
Sbjct: 335 PSTYLHSFPCTLFTYNHEDHFSRTPFAELSKEMQDPKLDIVFPRFPELK 383


>UniRef50_Q0FEW3 Cluster: Putative uncharacterized protein; n=1;
           alpha proteobacterium HTCC2255|Rep: Putative
           uncharacterized protein - alpha proteobacterium HTCC2255
          Length = 332

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = -2

Query: 639 QPSRYMEGYPCNGFSYINKNSMIATPRSSLARSSNNFLVTLLLSKAPPLKILGDL 475
           Q S  + G+P N F  I KN  ++ P+S L  S+N F +  L  K     +LG L
Sbjct: 45  QKSLSLRGFP-NRFDAIIKNIKLSNPKSGLEWSANQFEILQLSYKPNHFIVLGPL 98


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 218 FVFFYCLDGWTSYIPPGVKWLLEPIDIYNVNAPPTLRYKF 337
           F+    +D  T+++     W   P  +Y+VNAPPT RYKF
Sbjct: 154 FLLLRWVDELTAHLVLSGYW--SPRHLYDVNAPPTSRYKF 191


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,838,780
Number of Sequences: 1657284
Number of extensions: 12908756
Number of successful extensions: 26021
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26017
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)