Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0237
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.10 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.54 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   8.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 397 SSNAFRFEGWGSRCNYTETLELISQGGWRI 308
           + N+ ++ G      Y E +EL  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 603  GFSYINKNSMIATPRSSLARSSNNFLVTLLLSKAPPLKIL 484
            GF+ ++ +SM   P  S A   N F   ++  K+  +K+L
Sbjct: 2356 GFAVLDSSSMTLKPHDSWADIDNEFYKKVVSYKSRGVKVL 2395



 Score = 24.6 bits (51), Expect = 0.71
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -2

Query: 603  GFSYINKNSMIATPRSSLARSSNNFLVTLLLSKAPPLKIL 484
            GF+ +N + +I  P  + A   N F   +   K+  +K+L
Sbjct: 1858 GFAVLNGDQLIIKPHDTWADFDNKFYEKVTAYKSKGIKVL 1897


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 391 NAFRFEGWGSRCNYTETLELISQGGW 314
           +A R+ G      Y E +E  + GGW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 124 VPEYFVITITVYFHMVLENF 183
           +PE  VI +  Y H +L +F
Sbjct: 124 IPESLVIKLVDYHHQLLGHF 143


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 573 IATPRSSLARSSNNFLVTLLLSKAPPLK 490
           ++TP +S A  S+     L +S +PP K
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 573 IATPRSSLARSSNNFLVTLLLSKAPPLK 490
           ++TP +S A  S+     L +S +PP K
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 573 IATPRSSLARSSNNFLVTLLLSKAPPLK 490
           ++TP +S A  S+     L +S +PP K
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 275 WLLEPIDIYNVNAPPTLRYK 334
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 573 IATPRSSLARSSNNFLVTLLLSKAPPLK 490
           ++TP +S A  S+     L +S +PP K
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 573 IATPRSSLARSSNNFLVTLLLSKAPPLK 490
           ++TP +S A  S+     L +S +PP K
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 573 IATPRSSLARSSNNFLVTLLLSKAPPLK 490
           ++TP +S A  S+     L +S +PP K
Sbjct: 85  LSTPSNSNATKSSGLTSPLSVSTSPPGK 112


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 573 IATPRSSLARSSNNFLVTLLLSKAPPLK 490
           ++TP +S A  S+     L +S +PP K
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 573 IATPRSSLARSSNNFLVTLLLSKAPPLK 490
           ++TP +S A  S+     L +S +PP K
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 573 IATPRSSLARSSNNFLVTLLLSKAPPLK 490
           ++TP +S A  S+     L +S +PP K
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGK 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,908
Number of Sequences: 336
Number of extensions: 3487
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)