Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0236
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122100-1|AAM52612.1|  324|Drosophila melanogaster GH08370p pro...    29   4.1  
AY069139-1|AAL39284.1|  324|Drosophila melanogaster GH15292p pro...    29   4.1  
AJ786412-1|CAH10219.1|  322|Drosophila melanogaster G-protein co...    29   4.1  
AE014296-837|AAX52733.1|  322|Drosophila melanogaster CG18314-PC...    29   4.1  
AE014296-836|AAX52732.1|  322|Drosophila melanogaster CG18314-PB...    29   4.1  
AE014296-835|AAF47893.1|  322|Drosophila melanogaster CG18314-PA...    29   4.1  

>AY122100-1|AAM52612.1|  324|Drosophila melanogaster GH08370p
           protein.
          Length = 324

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 411 NKIIALQYNALFTKLRNVYILFNIAVITMYKTCKHINST--YYVTSKCITGLIC*ILSKP 238
           +K+ AL    L + L    +L N+ +I  Y   K       YY+ S  I  L+C +L  P
Sbjct: 11  SKVEALTKAVLISILGVAIVLSNLLIIATYANFKGPTEVINYYLLSLAIADLLCGLLVVP 70

Query: 237 F 235
           F
Sbjct: 71  F 71


>AY069139-1|AAL39284.1|  324|Drosophila melanogaster GH15292p
           protein.
          Length = 324

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 411 NKIIALQYNALFTKLRNVYILFNIAVITMYKTCKHINST--YYVTSKCITGLIC*ILSKP 238
           +K+ AL    L + L    +L N+ +I  Y   K       YY+ S  I  L+C +L  P
Sbjct: 11  SKVEALTKAVLISILGVAIVLSNLLIIATYANFKGPTEVINYYLLSLAIADLLCGLLVVP 70

Query: 237 F 235
           F
Sbjct: 71  F 71


>AJ786412-1|CAH10219.1|  322|Drosophila melanogaster G-protein
           coupled receptor protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 411 NKIIALQYNALFTKLRNVYILFNIAVITMYKTCKHINST--YYVTSKCITGLIC*ILSKP 238
           +K+ AL    L + L    +L N+ +I  Y   K       YY+ S  I  L+C +L  P
Sbjct: 11  SKVEALTKAVLISILGVAIVLSNLLIIATYANFKGPTEVINYYLLSLAIADLLCGLLVVP 70

Query: 237 F 235
           F
Sbjct: 71  F 71


>AE014296-837|AAX52733.1|  322|Drosophila melanogaster CG18314-PC,
           isoform C protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 411 NKIIALQYNALFTKLRNVYILFNIAVITMYKTCKHINST--YYVTSKCITGLIC*ILSKP 238
           +K+ AL    L + L    +L N+ +I  Y   K       YY+ S  I  L+C +L  P
Sbjct: 11  SKVEALTKAVLISILGVAIVLSNLLIIATYANFKGPTEVINYYLLSLAIADLLCGLLVVP 70

Query: 237 F 235
           F
Sbjct: 71  F 71


>AE014296-836|AAX52732.1|  322|Drosophila melanogaster CG18314-PB,
           isoform B protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 411 NKIIALQYNALFTKLRNVYILFNIAVITMYKTCKHINST--YYVTSKCITGLIC*ILSKP 238
           +K+ AL    L + L    +L N+ +I  Y   K       YY+ S  I  L+C +L  P
Sbjct: 11  SKVEALTKAVLISILGVAIVLSNLLIIATYANFKGPTEVINYYLLSLAIADLLCGLLVVP 70

Query: 237 F 235
           F
Sbjct: 71  F 71


>AE014296-835|AAF47893.1|  322|Drosophila melanogaster CG18314-PA,
           isoform A protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 411 NKIIALQYNALFTKLRNVYILFNIAVITMYKTCKHINST--YYVTSKCITGLIC*ILSKP 238
           +K+ AL    L + L    +L N+ +I  Y   K       YY+ S  I  L+C +L  P
Sbjct: 11  SKVEALTKAVLISILGVAIVLSNLLIIATYANFKGPTEVINYYLLSLAIADLLCGLLVVP 70

Query: 237 F 235
           F
Sbjct: 71  F 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,270,935
Number of Sequences: 53049
Number of extensions: 506151
Number of successful extensions: 996
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)