Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0234
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    24   4.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.1  

>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 22  CHCKNYIYIFIFSQTINSINYNHELITKKII 114
           C C     +F+ ++T+ S  Y  E + K+I+
Sbjct: 194 CSCGKKTKVFVTNKTMTSELYQKECLQKRIL 224


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +1

Query: 454 WYP*ENRISLKFALSTCAKIQDE*LNNSISRQ 549
           W P  N+I  K ALST     +E L NSI  Q
Sbjct: 889 WIP-LNKIHKKLALSTEESSINEILMNSIQEQ 919


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,154
Number of Sequences: 2352
Number of extensions: 11308
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)