Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0233
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   2.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   2.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.4  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   4.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   4.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   4.5  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 398 PGILSSIERGISAMPAPAI 342
           P + S +  G+S MP PA+
Sbjct: 81  PSLSSGLGGGLSGMPMPAL 99


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 181 CASNPCQSG 207
           C SNPCQ+G
Sbjct: 380 CDSNPCQNG 388



 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +1

Query: 181 CASNPCQSG 207
           CA++PCQ+G
Sbjct: 342 CATSPCQNG 350



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 181 CASNPCQSG 207
           C  NPCQ+G
Sbjct: 226 CKPNPCQNG 234


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 55  YAGWCTGGKTECGVY 99
           +AGW T G   C  Y
Sbjct: 478 FAGWVTDGNNWCSPY 492


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 137 PVYREELMIVTPQGY 181
           PV+ E L IVT Q Y
Sbjct: 47  PVHDEHLFIVTHQAY 61


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 137 PVYREELMIVTPQGY 181
           PV+ E L IVT Q Y
Sbjct: 47  PVHDEHLFIVTHQAY 61


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 137 PVYREELMIVTPQGY 181
           PV+ E L IVT Q Y
Sbjct: 47  PVHDEHLFIVTHQAY 61


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -2

Query: 437 HCSANGHASTW*CPGILSSIE 375
           +C+A G  + W C  +  ++E
Sbjct: 228 NCTAKGRVAVWMCNNLHKALE 248


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -2

Query: 437 HCSANGHASTW*CPGILSSIE 375
           +C+A G  + W C  +  ++E
Sbjct: 228 NCTAKGRVAVWMCNNLHKALE 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,902
Number of Sequences: 336
Number of extensions: 2975
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)