Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0233
         (489 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127494-1|BAC87005.1|  124|Homo sapiens protein ( Homo sapiens ...    30   4.9  
BC150171-1|AAI50172.1| 1298|Homo sapiens ZNF536 protein protein.       29   8.6  
BC146757-1|AAI46758.1| 1300|Homo sapiens zinc finger protein 536...    29   8.6  
BC132722-1|AAI32723.1| 1300|Homo sapiens zinc finger protein 536...    29   8.6  
BC132720-1|AAI32721.1| 1300|Homo sapiens zinc finger protein 536...    29   8.6  
AY502063-1|AAR89453.1|  312|Homo sapiens zeta-sarcoglycan protein.     29   8.6  
AB002388-1|BAA20844.2| 1312|Homo sapiens KIAA0390 protein.             29   8.6  

>AK127494-1|BAC87005.1|  124|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45587 fis, clone BRTHA3014105. ).
          Length = 124

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 198 ARVTGAYPCGVTIISSSRYTGIPSMAVWLMGPSI 97
           +R+  A P G+    SSR T  P+  +WL  PS+
Sbjct: 39  SRLASAPPIGLGFSGSSRPTSAPTTRLWLPSPSL 72


>BC150171-1|AAI50172.1| 1298|Homo sapiens ZNF536 protein protein.
          Length = 1298

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = -1

Query: 444 PTPLLS*RPRFNLVMPRHTFQHRARNKRNACSCDH-TGQHSVIRLHL 307
           P PL   R RFN ++  H   H          CDH   Q   +++HL
Sbjct: 131 PCPLCGKRFRFNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLKIHL 177


>BC146757-1|AAI46758.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = -1

Query: 444 PTPLLS*RPRFNLVMPRHTFQHRARNKRNACSCDH-TGQHSVIRLHL 307
           P PL   R RFN ++  H   H          CDH   Q   +++HL
Sbjct: 131 PCPLCGKRFRFNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLKIHL 177


>BC132722-1|AAI32723.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = -1

Query: 444 PTPLLS*RPRFNLVMPRHTFQHRARNKRNACSCDH-TGQHSVIRLHL 307
           P PL   R RFN ++  H   H          CDH   Q   +++HL
Sbjct: 131 PCPLCGKRFRFNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLKIHL 177


>BC132720-1|AAI32721.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = -1

Query: 444 PTPLLS*RPRFNLVMPRHTFQHRARNKRNACSCDH-TGQHSVIRLHL 307
           P PL   R RFN ++  H   H          CDH   Q   +++HL
Sbjct: 131 PCPLCGKRFRFNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLKIHL 177


>AY502063-1|AAR89453.1|  312|Homo sapiens zeta-sarcoglycan protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 125 IDGIPVYREELMIVTPQGYAPVTRASQVNGSNIYAFRANCSY 250
           I+ + + RE+ ++ T Q   P T  +Q+    IY +R  C Y
Sbjct: 9   IEELKMTREQYILATQQNNLPRTENAQLYPVGIYGWRKRCLY 50


>AB002388-1|BAA20844.2| 1312|Homo sapiens KIAA0390 protein.
          Length = 1312

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = -1

Query: 444 PTPLLS*RPRFNLVMPRHTFQHRARNKRNACSCDH-TGQHSVIRLHL 307
           P PL   R RFN ++  H   H          CDH   Q   +++HL
Sbjct: 143 PCPLCGKRFRFNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLKIHL 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,415,194
Number of Sequences: 237096
Number of extensions: 2022311
Number of successful extensions: 3826
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3826
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)