Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0233
         (489 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010257-1|AAQ23575.1|  893|Drosophila melanogaster RE34565p pro...    29   3.4  
AE014134-2224|AAF53208.2|  893|Drosophila melanogaster CG12287-P...    29   3.4  
AY060471-1|AAL25510.1|  323|Drosophila melanogaster SD05789p pro...    28   6.0  
AE014296-638|AAN11559.1|  323|Drosophila melanogaster CG12016-PB...    28   6.0  
AE014296-637|AAF47759.2|  323|Drosophila melanogaster CG12016-PA...    28   6.0  
AE014297-1084|AAZ52524.1|  195|Drosophila melanogaster CG33631-P...    28   7.9  

>BT010257-1|AAQ23575.1|  893|Drosophila melanogaster RE34565p
           protein.
          Length = 893

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -1

Query: 414 FNLVMPRHTFQHRARNKRNACSCDHTGQHSVIRLHLMDSSR 292
           F  + P    QH   N+ +    +HTG HS +R H  +  R
Sbjct: 281 FKSLTPPKALQHHQNNQNHQIPQNHTGDHSFVR-HFHERDR 320


>AE014134-2224|AAF53208.2|  893|Drosophila melanogaster CG12287-PB,
           isoform B protein.
          Length = 893

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -1

Query: 414 FNLVMPRHTFQHRARNKRNACSCDHTGQHSVIRLHLMDSSR 292
           F  + P    QH   N+ +    +HTG HS +R H  +  R
Sbjct: 281 FKSLTPPKALQHHQNNQNHQIPQNHTGDHSFVR-HFHERDR 320


>AY060471-1|AAL25510.1|  323|Drosophila melanogaster SD05789p
           protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 196 TGYWRISLWRDDHQFLAVYRYPVDGSMVNGSINKRRIQFSLQYTIQH 56
           TGY+ + +W    +  + YR   D + +NG I K +I   + + I H
Sbjct: 233 TGYFELCVWPHYEKNFSEYRDCKDITFLNGEIAKEKILAFVLHRIVH 279


>AE014296-638|AAN11559.1|  323|Drosophila melanogaster CG12016-PB,
           isoform B protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 196 TGYWRISLWRDDHQFLAVYRYPVDGSMVNGSINKRRIQFSLQYTIQH 56
           TGY+ + +W    +  + YR   D + +NG I K +I   + + I H
Sbjct: 233 TGYFELCVWPHYEKNFSEYRDCKDITFLNGEIAKEKILAFVLHRIVH 279


>AE014296-637|AAF47759.2|  323|Drosophila melanogaster CG12016-PA,
           isoform A protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 196 TGYWRISLWRDDHQFLAVYRYPVDGSMVNGSINKRRIQFSLQYTIQH 56
           TGY+ + +W    +  + YR   D + +NG I K +I   + + I H
Sbjct: 233 TGYFELCVWPHYEKNFSEYRDCKDITFLNGEIAKEKILAFVLHRIVH 279


>AE014297-1084|AAZ52524.1|  195|Drosophila melanogaster CG33631-PA
           protein.
          Length = 195

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 212 GSNIYAFRANCSYRPTSRAGFMLTVPLRELSM 307
           GSN   F      RPT R  F+  + +R+L +
Sbjct: 78  GSNFLTFNIKIRVRPTGRTNFVTLLQMRDLDL 109


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,569,564
Number of Sequences: 53049
Number of extensions: 597855
Number of successful extensions: 1881
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1881
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)