Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0232
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   0.93 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.6  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 484 DQEGPVNLSKNCYHNFYVIPWSQPLP 561
           D   P N  KN  HNF + P + P+P
Sbjct: 223 DSNIPQNNPKNKQHNFNLPPGAIPVP 248


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 134 FRCVRARYHHLPC 172
           + C   R HH+PC
Sbjct: 935 YMCEGERKHHMPC 947


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 85  QFPRPENSRWPSPLPTSAARR 23
           Q    EN   P P PT  +RR
Sbjct: 243 QLKELENPPTPKPRPTKVSRR 263


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -2

Query: 378 QQWMVFLYRISLLARPDCIIMRLRTVSK 295
           Q ++ F Y++ L    D I+MR + +++
Sbjct: 156 QNYIHFFYQLLLYLITDMILMRYKELNR 183


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 574 YMNLRGVAATTESHRNYGN 518
           Y N+  ++++T SH  +GN
Sbjct: 259 YSNMDYLSSSTMSHSQFGN 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,368
Number of Sequences: 336
Number of extensions: 2429
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)