Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0232
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 82 6e-17
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 39 5e-04
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 39 5e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 39 7e-04
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 38 0.002
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 35 0.009
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 34 0.015
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 34 0.020
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 33 0.026
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 33 0.046
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 31 0.11
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 31 0.11
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 31 0.19
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 31 0.19
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 30 0.25
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 28 1.3
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 27 1.7
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 27 2.3
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 27 3.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 4.0
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 25 7.0
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 82.2 bits (194), Expect = 6e-17
Identities = 39/68 (57%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +3
Query: 6 LDFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 179
LD+ARTRLA D K G+R+F+GL + K ++SDGL GLYRGFG SV GI++YR Y
Sbjct: 153 LDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLY 212
Query: 180 FGFYDTAR 203
FG YDT +
Sbjct: 213 FGMYDTLK 220
Score = 77.4 bits (182), Expect = 2e-15
Identities = 37/74 (50%), Positives = 48/74 (64%)
Frame = +2
Query: 263 VTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVF 442
VTT +G+ SYP DT+RRRMMM SG A + Y ++ C I EG +FFKGA +N+
Sbjct: 242 VTTGSGVASYPLDTIRRRMMMTSGEA---VKYSSSFECGRQILAKEGARSFFKGAGANIL 298
Query: 443 RGTGGAFVLVLYDE 484
RG GA VL +YD+
Sbjct: 299 RGVAGAGVLSIYDQ 312
Score = 30.3 bits (65), Expect = 0.25
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +3
Query: 66 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVIS 245
+ G+G C + +G+I L+RG +V +A F F D + M K
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAK 130
Query: 246 W 248
W
Sbjct: 131 W 131
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 281 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 424
++ PFD V+ R+ QS + +Y N + C I+K EG +AF+KG
Sbjct: 33 LVGQPFDCVKVRLQSQSNVSP---IYNNALDCVKKISKNEGLAAFYKG 77
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 81 NCISKIFKSDGLIGLYRGFGVSVQGI 158
+C+ KI K++GL Y+G + + GI
Sbjct: 60 DCVKKISKNEGLAAFYKGTVLPLLGI 85
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 39.1 bits (87), Expect = 5e-04
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = +2
Query: 263 VTTVAGIISY----PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAF 430
V +VAGII+ P DTV+ RM QS A + YKN+IHC I +G F+ GA
Sbjct: 209 VGSVAGIITVYCTQPIDTVKSRM--QSLSASKE--YKNSIHCAYKILTQDGLLRFWSGAT 264
Query: 431 SNVFR-GTGGAFVLVLYDE 484
+ R G V +Y++
Sbjct: 265 PRLARLILSGGIVFTVYEK 283
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 38.7 bits (86), Expect = 7e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 3 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 134
PLD +TR+ VGK D ++G +C+ KI K++G LYRG
Sbjct: 28 PLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRG 67
Score = 38.7 bits (86), Expect = 7e-04
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 63 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 212
+++G +C +KI K + ++ LY GF ++ +++ A YFG R L
Sbjct: 140 KYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIRNSL 189
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +2
Query: 269 TVAGI----ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSN 436
T+ GI +S PFD ++ R+ A Y T+A+ EG +A +KG
Sbjct: 207 TIGGIFGTFLSTPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVPK 266
Query: 437 VFR-GTGGAFVLVLYD 481
V R G GG +LV+++
Sbjct: 267 VLRLGPGGGILLVVFN 282
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 269 TVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFF 418
T++ PFD +++RM + S + YK+ +HC T+ + EG AF+
Sbjct: 125 TISDAFMTPFDVIKQRMQLPSRK------YKSALHCATTVFRNEGLGAFY 168
Score = 27.9 bits (59), Expect = 1.3
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 PLDFARTRLAADVGKGDGQREFSG-LGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 179
P+D +TR+ G R SG + N + KI ++G+ L+RG + G A Y
Sbjct: 39 PVDAIKTRMQMLNGVS---RSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHAIY 95
Query: 180 FGFYDTARGMLPDPKNTPIVISWA 251
F + + + + P+ + A
Sbjct: 96 FSVLEFFKSKINASPDRPLASALA 119
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = +3
Query: 60 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 212
R++ +C + +F+++GL Y + + I + A YDT L
Sbjct: 146 RKYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDTCMSFL 196
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 35.1 bits (77), Expect = 0.009
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Frame = +3
Query: 3 PLDFARTR--LAADVGKGD-GQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 173
P + +TR L + K D +R + +G S I + +G+ GL RG G + I
Sbjct: 43 PFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNG 102
Query: 174 SYFGFYDTAR-----GMLPDPKNTPIVISWA 251
GFY+ R L DPK + I+ A
Sbjct: 103 CRLGFYEPIRRTLNTWFLDDPKGNKLAINVA 133
Score = 32.7 bits (71), Expect = 0.046
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 296 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVFR 445
FDTV RM Q K+ LYKN I C ++EG A +KG +++ R
Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295
Score = 29.1 bits (62), Expect = 0.57
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 81 NCISKIFKSDGLIGLYRGFGVSVQGI 158
+CI K +S+G LY+GFG + I
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARI 296
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 34.3 bits (75), Expect = 0.015
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 3 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 158
P+ +TRL D G + S + +CI K + +G GLY+G S+ G+
Sbjct: 182 PIWLVKTRLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKGLSASLLGV 232
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 33.9 bits (74), Expect = 0.020
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 72 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 194
G+ + + ++KS+GL+GL+RGFG + + F FY+
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
Score = 25.4 bits (53), Expect = 7.0
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +2
Query: 275 AGIISYPFDTVRRRMMMQ----SGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVF 442
A ++ P + ++ R+ +Q + +S+ Y + IAK EG FF G + +
Sbjct: 124 ASVVYVPSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATIL 183
Query: 443 RGTG-GAFVLVLYDE 484
R F L+ Y++
Sbjct: 184 RDIPFSGFQLLFYEK 198
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 33.5 bits (73), Expect = 0.026
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +3
Query: 3 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 182
P D R R + G G + + + I I+K++G+ G +RG+ ++ II + +
Sbjct: 246 PADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
Query: 183 GFYDTARGMLPD 218
Y+T ML D
Sbjct: 305 YTYETVSKMLHD 316
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 60 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 194
+E++ L + + KI+ +GLIG +RG G + Y A F ++
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFN 98
Score = 31.1 bits (67), Expect = 0.14
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 284 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVFR 445
+++P D +RRR + YKN I KTEG + FF+G SN+ +
Sbjct: 243 LTFPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 32.7 bits (71), Expect = 0.046
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 182
PL+ AR + + + KG Q G+ I I+K++G+ GLYRG V G+ Y+
Sbjct: 224 PLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYRG-AVPRMGLGAYQTFVM 280
Query: 183 GFY-DTARGML 212
F D RG L
Sbjct: 281 VFLADCVRGYL 291
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.5 bits (68), Expect = 0.11
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 66 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 203
F + +C K++GL GLYRG + + + R+ F YD+ +
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 31.5 bits (68), Expect = 0.11
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 3 PLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 179
P+D + R+ +D+ +G + L N +++KS G+ G YRG V + G+ Y A+
Sbjct: 248 PVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRGVLVGILGMFPYSATD 305
Query: 180 FGFYD 194
G ++
Sbjct: 306 LGTFE 310
Score = 30.7 bits (66), Expect = 0.19
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 284 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVFR 445
I +P + +R R+ Q G + Y I C+ K EG +KG N+ +
Sbjct: 352 IVFPLNVIRTRLQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLK 404
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 30.7 bits (66), Expect = 0.19
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 66 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 203
++ + + I I+K +G+ G +RGFGV+ + Y FY+ ++
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSK 186
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 30.7 bits (66), Expect = 0.19
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 81 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVI 242
N IS + +S+GL G YRG+ + V + S++ Y+ ++ L N I +
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISV 174
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 30.3 bits (65), Expect = 0.25
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 356 YKNTIHCWATIAKTEGTSAFFKGAFSNVF 442
Y NT + I K EG +AF++G F ++F
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLF 258
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 93 KIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD 218
KI+K +GL YRG S+ G ++ F Y+ + L D
Sbjct: 239 KIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYEYFKSFLDD 279
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 72 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDP 221
G G ++I+K G GL+ G GV + I + + YD+ + M P
Sbjct: 258 GAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDSFKIMCGFP 307
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 87 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 212
+ +I+K +G+ G +G G+ V + + Y G Y+ + L
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYEHVKSHL 247
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 27.1 bits (57), Expect = 2.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 3 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 182
PLD A+ ++ A + + D + F S I + + LY G ++V G +YF
Sbjct: 20 PLDLAKIQMQASMNQ-DSKSLFQVFK---SNIGSNGSIRSLYHGLSINVLGSAASWGAYF 75
Query: 183 GFYDTAR 203
YD ++
Sbjct: 76 CIYDFSK 82
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 114 LIGLYRGFGVSVQGIIIYRASYFGFYDTA 200
+ YRGF V++ GI Y F YD A
Sbjct: 184 ICNFYRGFSVTLTGIFPYAGMSFLAYDLA 212
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 284 ISYPFDTVRRRMMMQSGRA-KSDILYKNTIHCWATIAKTEGTSAFFKG 424
+SYPF+ RR+M + R KS + K + T K G FF G
Sbjct: 253 VSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQ---TTYKEAGMRGFFVG 297
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 4.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 474 KTSTKAPPVPLKTLEKAPL 418
K S+KAPPVPL + + P+
Sbjct: 1016 KLSSKAPPVPLPSADAPPI 1034
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 7.0
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3
Query: 204 GMLPDPKNTPIV 239
GMLPDPK+ P++
Sbjct: 89 GMLPDPKSIPVI 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,210,212
Number of Sequences: 5004
Number of extensions: 40947
Number of successful extensions: 169
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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