Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0228
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27 pro... 117 2e-26
L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein. 117 2e-26
BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27 (... 117 2e-26
BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-l... 117 2e-26
BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27 (... 117 2e-26
AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27 ... 117 2e-26
AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27 p... 117 2e-26
BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein. 112 5e-25
AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27 p... 104 1e-22
AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27 ... 42 0.001
Y17151-1|CAA76658.2| 1527|Homo sapiens multidrug resistance prot... 29 7.2
AJ294545-1|CAC69553.1| 1514|Homo sapiens multidrug resistance as... 29 7.2
AF104943-1|AAD04170.1| 1527|Homo sapiens ABC transporter MOAT-D ... 29 7.2
AF085691-1|AAD02846.1| 1238|Homo sapiens multidrug resistance-as... 29 7.2
AF085690-1|AAD02845.1| 1527|Homo sapiens multidrug resistance-as... 29 7.2
AF083552-1|AAC34668.1| 1527|Homo sapiens canalicular multispecif... 29 7.2
AF009670-1|AAD01430.1| 1528|Homo sapiens MRP3 protein. 29 7.2
AB208954-1|BAD92191.1| 1533|Homo sapiens ATP-binding cassette, s... 29 7.2
BC007355-1|AAH07355.1| 287|Homo sapiens solute carrier family 2... 29 9.6
AK075249-1|BAC11497.1| 287|Homo sapiens protein ( Homo sapiens ... 29 9.6
AJ131613-1|CAB59892.1| 287|Homo sapiens dicarboxylate carrier p... 29 9.6
AJ131612-1|CAB60007.1| 287|Homo sapiens dicarboxylate carrier p... 29 9.6
>U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 117 bits (282), Expect = 2e-26
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +2
Query: 86 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFK 256
LV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF+
Sbjct: 24 LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Score = 41.9 bits (94), Expect = 0.001
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 16 MPLAIDLLHPSPASERRKHKLKR 84
MPLA DLLHPSP E+RKHK KR
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKR 23
>L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein.
Length = 84
Score = 117 bits (282), Expect = 2e-26
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +2
Query: 86 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFK 256
LV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF+
Sbjct: 24 LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Score = 41.9 bits (94), Expect = 0.001
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 16 MPLAIDLLHPSPASERRKHKLKR 84
MPLA DLLHPSP E+RKHK KR
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKR 23
>BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 117 bits (282), Expect = 2e-26
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +2
Query: 86 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFK 256
LV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF+
Sbjct: 24 LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Score = 41.9 bits (94), Expect = 0.001
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 16 MPLAIDLLHPSPASERRKHKLKR 84
MPLA DLLHPSP E+RKHK KR
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKR 23
>BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-like
protein.
Length = 84
Score = 117 bits (282), Expect = 2e-26
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +2
Query: 86 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFK 256
LV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF+
Sbjct: 24 LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Score = 36.3 bits (80), Expect = 0.048
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 16 MPLAIDLLHPSPASERRKHKLKR 84
MPLA DLLHPS E++KHK KR
Sbjct: 1 MPLARDLLHPSLEEEKKKHKEKR 23
>BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 117 bits (282), Expect = 2e-26
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +2
Query: 86 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFK 256
LV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF+
Sbjct: 24 LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Score = 41.9 bits (94), Expect = 0.001
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 16 MPLAIDLLHPSPASERRKHKLKR 84
MPLA DLLHPSP E+RKHK KR
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKR 23
>AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 117 bits (282), Expect = 2e-26
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +2
Query: 86 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFK 256
LV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF+
Sbjct: 24 LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Score = 41.9 bits (94), Expect = 0.001
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 16 MPLAIDLLHPSPASERRKHKLKR 84
MPLA DLLHPSP E+RKHK KR
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKR 23
>AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 117 bits (282), Expect = 2e-26
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +2
Query: 86 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFK 256
LV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF+
Sbjct: 24 LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Score = 41.9 bits (94), Expect = 0.001
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 16 MPLAIDLLHPSPASERRKHKLKR 84
MPLA DLLHPSP E+RKHK KR
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKR 23
>BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein.
Length = 113
Score = 112 bits (270), Expect = 5e-25
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = +2
Query: 86 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSF 253
LV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEG SF
Sbjct: 40 LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGISF 95
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 22 LAIDLLHPSPASERRKHKLKR 84
LA DLLHPS E++KHK KR
Sbjct: 19 LARDLLHPSLEEEKKKHKKKR 39
>AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27
protein.
Length = 69
Score = 104 bits (250), Expect = 1e-22
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = +2
Query: 86 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 238
LV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 19 LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 69
Score = 35.1 bits (77), Expect = 0.11
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 31 DLLHPSPASERRKHKLKR 84
DLLHPSP E+RKHK KR
Sbjct: 1 DLLHPSPEEEKRKHKKKR 18
>AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 66
Score = 41.9 bits (94), Expect = 0.001
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 16 MPLAIDLLHPSPASERRKHKLKR 84
MPLA DLLHPSP E+RKHK KR
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKR 23
Score = 35.5 bits (78), Expect = 0.083
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 86 LVPHPNSYFMDVKCPG 133
LV PNSYFMDVKCPG
Sbjct: 24 LVQSPNSYFMDVKCPG 39
>Y17151-1|CAA76658.2| 1527|Homo sapiens multidrug resistance protein
3 (ABCC3) protein.
Length = 1527
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 81 AA*CHILTLISWMLSALAVTRLQQFLVTHREWWSALDAQRSFVN 212
AA H T +WM S VT + ++ + + + LDA+++FV+
Sbjct: 528 AAYLHTTTTFTWMCSPFLVTLITLWVYVYVDPNNVLDAEKAFVS 571
>AJ294545-1|CAC69553.1| 1514|Homo sapiens multidrug resistance
associated protein protein.
Length = 1514
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 81 AA*CHILTLISWMLSALAVTRLQQFLVTHREWWSALDAQRSFVN 212
AA H T +WM S VT + ++ + + + LDA+++FV+
Sbjct: 528 AAYLHTTTTFTWMCSPFLVTLITLWVYVYVDPNNVLDAEKAFVS 571
>AF104943-1|AAD04170.1| 1527|Homo sapiens ABC transporter MOAT-D
protein.
Length = 1527
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 81 AA*CHILTLISWMLSALAVTRLQQFLVTHREWWSALDAQRSFVN 212
AA H T +WM S VT + ++ + + + LDA+++FV+
Sbjct: 528 AAYLHTTTTFTWMCSPFLVTLITLWVYVYVDPNNVLDAEKAFVS 571
>AF085691-1|AAD02846.1| 1238|Homo sapiens multidrug
resistance-associated protein 3A protein.
Length = 1238
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 81 AA*CHILTLISWMLSALAVTRLQQFLVTHREWWSALDAQRSFVN 212
AA H T +WM S VT + ++ + + + LDA+++FV+
Sbjct: 528 AAYLHTTTTFTWMCSPFLVTLITLWVYVYVDPNNVLDAEKAFVS 571
>AF085690-1|AAD02845.1| 1527|Homo sapiens multidrug
resistance-associated protein 3 protein.
Length = 1527
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 81 AA*CHILTLISWMLSALAVTRLQQFLVTHREWWSALDAQRSFVN 212
AA H T +WM S VT + ++ + + + LDA+++FV+
Sbjct: 528 AAYLHTTTTFTWMCSPFLVTLITLWVYVYVDPNNVLDAEKAFVS 571
>AF083552-1|AAC34668.1| 1527|Homo sapiens canalicular multispecific
organic anion transporter 2 protein.
Length = 1527
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 81 AA*CHILTLISWMLSALAVTRLQQFLVTHREWWSALDAQRSFVN 212
AA H T +WM S VT + ++ + + + LDA+++FV+
Sbjct: 528 AAYLHTTTTFTWMCSPFLVTLITLWVYVYVDPNNVLDAEKAFVS 571
>AF009670-1|AAD01430.1| 1528|Homo sapiens MRP3 protein.
Length = 1528
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 81 AA*CHILTLISWMLSALAVTRLQQFLVTHREWWSALDAQRSFVN 212
AA H T +WM S VT + ++ + + + LDA+++FV+
Sbjct: 529 AAYLHTTTTFTWMCSPFLVTLITLWVYVYVDPNNVLDAEKAFVS 572
>AB208954-1|BAD92191.1| 1533|Homo sapiens ATP-binding cassette,
sub-family C, member 3 isoform MRP3 variant protein.
Length = 1533
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 81 AA*CHILTLISWMLSALAVTRLQQFLVTHREWWSALDAQRSFVN 212
AA H T +WM S VT + ++ + + + LDA+++FV+
Sbjct: 534 AAYLHTTTTFTWMCSPFLVTLITLWVYVYVDPNNVLDAEKAFVS 577
>BC007355-1|AAH07355.1| 287|Homo sapiens solute carrier family 25
(mitochondrial carrier; dicarboxylate transporter), me
protein.
Length = 287
Score = 28.7 bits (61), Expect = 9.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 137 YKITTVFSHAQRVVVCAGCSTILCQP 214
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AK075249-1|BAC11497.1| 287|Homo sapiens protein ( Homo sapiens
cDNA FLJ90768 fis, clone THYRO1000795, highly similar to
Mitochondrial dicarboxylate carrier. ).
Length = 287
Score = 28.7 bits (61), Expect = 9.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 137 YKITTVFSHAQRVVVCAGCSTILCQP 214
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AJ131613-1|CAB59892.1| 287|Homo sapiens dicarboxylate carrier
protein protein.
Length = 287
Score = 28.7 bits (61), Expect = 9.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 137 YKITTVFSHAQRVVVCAGCSTILCQP 214
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AJ131612-1|CAB60007.1| 287|Homo sapiens dicarboxylate carrier
protein protein.
Length = 287
Score = 28.7 bits (61), Expect = 9.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 137 YKITTVFSHAQRVVVCAGCSTILCQP 214
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,410,896
Number of Sequences: 237096
Number of extensions: 1204242
Number of successful extensions: 2112
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2112
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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