Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0227
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    25   0.44 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      25   0.44 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      25   0.77 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   7.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  

>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 520 GLLSMSGYIFECI*KNKQIGVPRTFPRKVPPDAPCSGALSAAGV 389
           G  +  G I E + KN+  G+P  F   V P     G++++  V
Sbjct: 306 GYTTREGMIVEMMRKNETPGMPNDFEEFVHPTVAKRGSITSKNV 349


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 520 GLLSMSGYIFECI*KNKQIGVPRTFPRKVPPDAPCSGALSAAGV 389
           G  +  G I E + KN+  G+P  F   V P     G++++  V
Sbjct: 306 GYTTREGMIVEMMRKNETPGMPNDFEEFVHPTVAKRGSITSKNV 349


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 520 GLLSMSGYIFECI*KNKQIGVPRTFPRKVPPDAPCSGALSAAGV 389
           G  +  G I E + KN+  G+P  F   V P     G++++  V
Sbjct: 304 GYTTREGMIVEMMRKNETPGMPNDFEGFVHPTVAKRGSITSKNV 347


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 626 KNRKGQKCRKKGNKGDTEN 570
           K++KG +   K N GD++N
Sbjct: 447 KDKKGSQVDHKNNLGDSKN 465


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 626 KNRKGQKCRKKGNKGDTEN 570
           K++KG +   K N GD++N
Sbjct: 339 KDKKGSQVDHKNNLGDSKN 357


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 291 SPSSSKSGAP 262
           SPSS+KSG+P
Sbjct: 74  SPSSTKSGSP 83


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +3

Query: 138 TWTPTSKGEKPSIRAMAHYVNHHPN 212
           TW     G + ++  M  +VN  P+
Sbjct: 271 TWNVVFNGSRKNLDVMKSFVNFRPS 295


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -1

Query: 390  WWLRASVTRYTCQRPSARS 334
            WW   +  R T  RP+  S
Sbjct: 1051 WWTTTTTRRTTTTRPTTTS 1069


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,055
Number of Sequences: 336
Number of extensions: 3151
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)