Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0227
         (690 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1723|AAF58369.1|  417|Drosophila melanogaster CG6016-PB...    33   0.37 
AE013599-1722|AAF58370.1|  417|Drosophila melanogaster CG6016-PA...    33   0.37 
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         30   2.6  
BT023812-1|AAZ66319.1|  933|Drosophila melanogaster RE19438p pro...    29   7.9  
AY089434-1|AAL90172.1|  933|Drosophila melanogaster AT25429p pro...    29   7.9  
AE014297-3787|AAF56459.1|  933|Drosophila melanogaster CG10669-P...    29   7.9  

>AE013599-1723|AAF58369.1|  417|Drosophila melanogaster CG6016-PB,
           isoform B protein.
          Length = 417

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +1

Query: 520 LINASIILKKEEYEYSTFSVSPLFPFLRHFWPFLFFASP 636
           +++A  + K  E++YS FSVS L P L+ +W +L   +P
Sbjct: 11  ILSAQQLRKLSEHKYSCFSVSLLDPLLQPWWNWLVAQTP 49


>AE013599-1722|AAF58370.1|  417|Drosophila melanogaster CG6016-PA,
           isoform A protein.
          Length = 417

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +1

Query: 520 LINASIILKKEEYEYSTFSVSPLFPFLRHFWPFLFFASP 636
           +++A  + K  E++YS FSVS L P L+ +W +L   +P
Sbjct: 11  ILSAQQLRKLSEHKYSCFSVSLLDPLLQPWWNWLVAQTP 49


>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -3

Query: 172  DGFSPFDVGVHVL**WTLVPNWNNTQPYLGLFF*FIRDFADFGLLVKK*ADLTK 11
            DG  P D G+  +  + +  N +  Q +LGL   F R   DF  L K   D+ K
Sbjct: 923  DGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILK 976


>BT023812-1|AAZ66319.1|  933|Drosophila melanogaster RE19438p
           protein.
          Length = 933

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = -1

Query: 366 RYTCQRPSARSFRFLPFLSRHVRRLSPSSSKSGAPFRVRFSALRHLDPKKL 214
           RY C     RSF   P L +H+R +  +    G  +      L  L P KL
Sbjct: 817 RYQCPH-CWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKL 866


>AY089434-1|AAL90172.1|  933|Drosophila melanogaster AT25429p
           protein.
          Length = 933

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = -1

Query: 366 RYTCQRPSARSFRFLPFLSRHVRRLSPSSSKSGAPFRVRFSALRHLDPKKL 214
           RY C     RSF   P L +H+R +  +    G  +      L  L P KL
Sbjct: 817 RYQCPH-CWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKL 866


>AE014297-3787|AAF56459.1|  933|Drosophila melanogaster CG10669-PA
           protein.
          Length = 933

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = -1

Query: 366 RYTCQRPSARSFRFLPFLSRHVRRLSPSSSKSGAPFRVRFSALRHLDPKKL 214
           RY C     RSF   P L +H+R +  +    G  +      L  L P KL
Sbjct: 817 RYQCPH-CWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKL 866


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,936,587
Number of Sequences: 53049
Number of extensions: 578284
Number of successful extensions: 1342
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)