Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0226
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   2.6  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   6.1  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   6.1  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   6.1  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   6.1  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 244 LHDLTDIIASYSSITLYHKFTDILQLDT 327
           L  L ++I+ + +I   +KF DI+++ T
Sbjct: 814 LRFLNEVISDFDAILDQNKFKDIIKIKT 841


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 607 WSWGKFIWPNFL 642
           W+W   + PNFL
Sbjct: 26  WNWNTLLRPNFL 37


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 607 WSWGKFIWPNFL 642
           W+W   + PNFL
Sbjct: 70  WNWNTLLRPNFL 81


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 607 WSWGKFIWPNFL 642
           W+W   + PNFL
Sbjct: 70  WNWNTLLRPNFL 81


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 607 WSWGKFIWPNFL 642
           W+W   + PNFL
Sbjct: 70  WNWNTLLRPNFL 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,005
Number of Sequences: 438
Number of extensions: 3823
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)