Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0224
(635 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24960.1 68417.m03576 ABA-responsive protein (HVA22d) identic... 86 2e-17
At4g36720.1 68417.m05210 abscisic acid-responsive HVA22 family p... 85 4e-17
At5g50720.1 68418.m06285 ABA-responsive protein (HVA22e) identic... 81 5e-16
At1g69700.1 68414.m08021 ABA-responsive protein (HVA22c) identic... 79 2e-15
At2g42820.1 68415.m05301 abscisic acid-responsive HVA22 family p... 76 2e-14
At1g74520.1 68414.m08633 ABA-responsive protein (HVA22a) identic... 75 5e-14
At5g62490.1 68418.m07843 ABA-responsive protein (HVA22b) identic... 68 5e-12
At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family p... 62 2e-10
At1g75700.1 68414.m08794 abscisic acid-responsive HVA22 family p... 62 2e-10
At2g36020.1 68415.m04423 abscisic acid-responsive HVA22 family p... 62 4e-10
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 61 7e-10
At5g38150.1 68418.m04598 expressed protein 30 1.1
At2g18950.1 68415.m02212 homogentisate phytylprenyltransferase f... 30 1.1
At5g47430.1 68418.m05844 expressed protein 29 2.0
At2g28800.2 68415.m03502 chloroplast membrane protein (ALBINO3) ... 29 2.0
At2g28800.1 68415.m03501 chloroplast membrane protein (ALBINO3) ... 29 2.6
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 29 2.6
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 29 3.4
At4g25290.1 68417.m03637 deoxyribodipyrimidine photolyase family... 28 6.0
At4g21970.1 68417.m03180 expressed protein contains Pfam profile... 28 6.0
At1g05200.1 68414.m00524 glutamate receptor family protein (GLR3... 28 6.0
At2g32390.1 68415.m03958 glutamate receptor family protein (GLR3... 27 7.9
>At4g24960.1 68417.m03576 ABA-responsive protein (HVA22d) identical
to AtHVA22d [Arabidopsis thaliana] GI:4884938
Length = 135
Score = 86.2 bits (204), Expect = 2e-17
Identities = 33/87 (37%), Positives = 56/87 (64%)
Frame = +3
Query: 258 VYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 437
+YP Y S+ A+ES K DD +WL YW++Y+ S+ E ++ W P+++ +K +FV W
Sbjct: 22 LYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVKLVFVAWL 81
Query: 438 YLPTEYNGSLVIYYRIIRPYYQKHMVV 518
LP ++ G+ IY R++R ++KH V+
Sbjct: 82 VLP-QFQGAAFIYNRVVREQFKKHGVL 107
>At4g36720.1 68417.m05210 abscisic acid-responsive HVA22 family
protein low similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 227
Score = 85.0 bits (201), Expect = 4e-17
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +3
Query: 264 PAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYL 443
P Y + KA+ES +++ K L YW Y FS+VE F+D I+ WFPLY+ +K F++W L
Sbjct: 49 PVYSTFKAIESGDENEQQKMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVKFAFLVWLQL 108
Query: 444 PTEYNGSLVIYYRIIRPYYQKH 509
PT GS IY IRP+ +H
Sbjct: 109 PT-VEGSKQIYNNQIRPFLLRH 129
>At5g50720.1 68418.m06285 ABA-responsive protein (HVA22e) identical
to AtHVA22e [Arabidopsis thaliana] GI:11225589
Length = 116
Score = 81.4 bits (192), Expect = 5e-16
Identities = 30/87 (34%), Positives = 56/87 (64%)
Frame = +3
Query: 258 VYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 437
+YP Y S+ A+ESP K DD +WL YW++Y+ ++ E ++ W P+++ K +FV W
Sbjct: 22 LYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTAKLVFVAWL 81
Query: 438 YLPTEYNGSLVIYYRIIRPYYQKHMVV 518
LP ++ G+ IY +++R ++K+ ++
Sbjct: 82 VLP-QFRGAAFIYNKVVREQFKKYGIL 107
>At1g69700.1 68414.m08021 ABA-responsive protein (HVA22c) identical
to AtHVA22c [Arabidopsis thaliana] GI:4884936
Length = 184
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +3
Query: 240 MQLDRFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKC 419
+ L VYP Y S+KA+E+ +D +WLTYWV+YA S+ E + WFP++ +K
Sbjct: 23 LPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISLFELTFSKPLEWFPIWPYMKL 82
Query: 420 IFVIWCYLPTEYNGSLVIYYRIIRPYYQ-KHMVVSMIW 530
+ W LP ++NG+ IY IRP+Y+ + IW
Sbjct: 83 FGICWLVLP-QFNGAEHIYKHFIRPFYRDPQRATTKIW 119
>At2g42820.1 68415.m05301 abscisic acid-responsive HVA22 family
protein contains Pfam profile PF03134: TB2/DP1, HVA22
family
Length = 158
Score = 75.8 bits (178), Expect = 2e-14
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +3
Query: 258 VYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 437
+YP Y S +A+ESP DD +WLTYW++Y+ +I E ++ W P + LK +F +W
Sbjct: 22 LYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWRVLAWLPFWPYLKLLFCMWL 81
Query: 438 YLPTEYNGSLVIYYRIIRPYYQKHMVV 518
LP ++G+ IY +R Y + M V
Sbjct: 82 VLPM-FSGAAYIYSNFVRQYVKIGMNV 107
>At1g74520.1 68414.m08633 ABA-responsive protein (HVA22a) identical
to AtHVA22a [Arabidopsis thaliana] GI:4884932
Length = 177
Score = 74.5 bits (175), Expect = 5e-14
Identities = 31/99 (31%), Positives = 56/99 (56%)
Frame = +3
Query: 258 VYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 437
VYP Y S++A+E+ DD +WLTYWV+Y+ +++E ++ W P++ +K I W
Sbjct: 27 VYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFAKLIEWLPIWSYMKLILTCWL 86
Query: 438 YLPTEYNGSLVIYYRIIRPYYQKHMVVSMIWANTGKQDL 554
+P ++G+ +Y +RP + ++ IW K D+
Sbjct: 87 VIP-YFSGAAYVYEHFVRPVFVNPRSIN-IWYVPKKMDI 123
>At5g62490.1 68418.m07843 ABA-responsive protein (HVA22b) identical
to AtHVA22b [Arabidopsis thaliana] GI:4884934
Length = 167
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/98 (33%), Positives = 49/98 (50%)
Frame = +3
Query: 258 VYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 437
VYP Y S++A+ES DD +WLTYW +Y+ + E ++ W PLY K W
Sbjct: 27 VYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFELTFFRLLEWIPLYPYAKLALTSWL 86
Query: 438 YLPTEYNGSLVIYYRIIRPYYQKHMVVSMIWANTGKQD 551
LP NG+ +Y +R + V+ +W K+D
Sbjct: 87 VLP-GMNGAAYLYEHYVRSFLLSPHTVN-VWYVPAKKD 122
>At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 296
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 FVYPAYMSMKALES--PQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 428
+ YPAY K +E P+ + W YW++ AC ++ E D V W P+Y K F
Sbjct: 16 YAYPAYECYKTVEKNRPEIEQLRFWCQYWILVACLTVFERVGDAFVSWVPMYSEAKLAFF 75
Query: 429 IWCYLPTEYNGSLVIYYRIIRPYYQKH 509
I+ + P + G+ +Y RPY +H
Sbjct: 76 IYLWYP-KTRGTTYVYESFFRPYLSQH 101
>At1g75700.1 68414.m08794 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 166
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 FVYPAYMSMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 428
+ YPAY K +E P+ W YW++ A +I E D +V W P+Y K F
Sbjct: 5 YAYPAYECFKTVELNKPEIQQLQFWCQYWIIVAALTIFERIGDALVSWLPMYSEAKLAFF 64
Query: 429 IWCYLPTEYNGSLVIYYRIIRPYYQKH 509
I+ + P + G+ +Y RPY KH
Sbjct: 65 IYLWFP-KTKGTTYVYDSFFRPYIAKH 90
>At2g36020.1 68415.m04423 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 258
Score = 61.7 bits (143), Expect = 4e-10
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 FVYPAYMSMKALESPQKDDDTK--WLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 428
+ YPA+ K +E + D + W YW++ A S E DF + W PLY +K +F
Sbjct: 16 YTYPAFECFKTVEKNKVDIEELRFWCQYWILLALISSFERVGDFFISWLPLYGEMKVVFF 75
Query: 429 IWCYLPTEYNGSLVIYYRIIRPYYQKH 509
++ + P + G+ +Y +++PY +H
Sbjct: 76 VYLWYP-KTKGTRHVYETLLKPYMAQH 101
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 60.9 bits (141), Expect = 7e-10
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 FVYPAYMSMKALES--PQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 428
+ YPAY KA+E P+ W YW++ A +I E D + W PLY K F
Sbjct: 16 YAYPAYECYKAVEKNKPEMQQLRFWCQYWILVAALTIFERVGDALASWVPLYCEAKLAFF 75
Query: 429 IWCYLPTEYNGSLVIYYRIIRPYYQKH 509
I+ + P + G+ +Y +PY KH
Sbjct: 76 IYLWFP-KTRGTTYVYDSFFQPYVAKH 101
>At5g38150.1 68418.m04598 expressed protein
Length = 574
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 230 APKPNTKYKPVNATKPKKMYNLFTPTF 150
+PKP K+ PV KP++ ++ TPTF
Sbjct: 528 SPKPVGKFTPVQRGKPRRYSSVGTPTF 554
>At2g18950.1 68415.m02212 homogentisate phytylprenyltransferase
family protein (HPT1) / tocopherol phytyltransferase
family protein (TPT1) identical to gi:17104828; contains
Pfam profile PF01040: UbiA prenyltransferase family;
identical to cDNA tocopherol polyprenyltransferase
(TPT1) GI:17104827
Length = 393
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 339 VYACFSIVEYFSDFIVGWFPLYWLLKCIFVI 431
+ A FSI+ ++ +IVG +PL+W L F++
Sbjct: 186 IVASFSIMSFWLGWIVGSWPLFWALFVSFML 216
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 281 HRHVRGVHEPIELHINSAPKPNTKYKPVNATKPKKMYNLFTPTFCSAS 138
HRH RG E + H +P + PV ATK + NL + F S
Sbjct: 734 HRHHRGETERSQHHHRKRSEPPSSEPPVPATKAEIENNLKSSVFARIS 781
>At2g28800.2 68415.m03502 chloroplast membrane protein (ALBINO3)
Oxa1p homolog {PMID:11148275}; identical to chloroplast
membrane protein ALBINO3 [Arabidopsis thaliana]
GI:2209332
Length = 348
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 270 YMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLL 413
Y+SM+ ++ PQ DD + T V ++ YF+ + +YWL+
Sbjct: 293 YVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLV 340
>At2g28800.1 68415.m03501 chloroplast membrane protein (ALBINO3)
Oxa1p homolog {PMID:11148275}; identical to chloroplast
membrane protein ALBINO3 [Arabidopsis thaliana]
GI:2209332
Length = 462
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 270 YMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWL 410
Y+SM+ ++ PQ DD + T V ++ YF+ + +YWL
Sbjct: 293 YVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWL 339
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 897
Score = 29.1 bits (62), Expect = 2.6
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = -3
Query: 513 PCASGSKDE*YGSRSRGTRCIQSAGSTRSRRCTLTASTMETSRR*NRKSTPR*KNRRTPP 334
P ++ S D+ +SR R S RSRR + S+ E+S RKS+ + KNR P
Sbjct: 790 PTSNESSDD-SKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSP 848
Query: 333 NM*AILYRHPSAVTP 289
RH S+ +P
Sbjct: 849 G--KSRRRHVSSRSP 861
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = -3
Query: 513 PCASGSKDE*YGSRSRGTRCIQSAGSTRSRRCTLTASTMETSRR*NRKSTPR*KNRRTPP 334
P ++ S D+ +SR R S RSRR + S+ E+S RKS+ + KNR P
Sbjct: 820 PTSNESSDD-SKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSP 878
>At4g25290.1 68417.m03637 deoxyribodipyrimidine photolyase family
protein / DNA photolyase family protein contains Pfam
domain, PF00875: deoxyribodipyrimidine photolyase
Length = 581
Score = 27.9 bits (59), Expect = 6.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +1
Query: 67 LQEYKDNIEQSLNDKSKPWT 126
L+ Y+DN++ +N K++ WT
Sbjct: 356 LEHYRDNVDNIVNSKNRVWT 375
>At4g21970.1 68417.m03180 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584; expression
supported by MPSS
Length = 181
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 542 PCVGPYHRYDHVLLVV 495
PC+GPYH + HV+ VV
Sbjct: 160 PCMGPYH-FSHVMFVV 174
>At1g05200.1 68414.m00524 glutamate receptor family protein (GLR3.4)
plant glutamate receptor family, PMID:11379626
Length = 959
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 608 PPRRESIIIFWIAIKTAF 555
PPRR+ I IFW + T F
Sbjct: 645 PPRRQLITIFWFSFSTMF 662
>At2g32390.1 68415.m03958 glutamate receptor family protein (GLR3.5)
plant glutamate receptor family, PMID:11379626
Length = 895
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 608 PPRRESIIIFWIAIKTAF 555
PPRR+ I +FW + T F
Sbjct: 580 PPRRQIITVFWFSFSTMF 597
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,171,409
Number of Sequences: 28952
Number of extensions: 347867
Number of successful extensions: 828
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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