Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0222
(695 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 26 0.30
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 25 0.91
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 0.91
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.8
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 6.4
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 6.4
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 6.4
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 6.4
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 26.2 bits (55), Expect = 0.30
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 153 RPRGRRKMTTSRTSCNQTESQPNVISAQMAAIVLXAXXPRTMDAVLLARVCIFI 314
RP RR++ + T C+ SQ VI + M + L T+ VL+ V I +
Sbjct: 962 RPAYRRRLNVNETVCSDYFSQGGVIESIMVSDYL-PLVAATLSGVLVLLVIIVL 1014
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.6 bits (51), Expect = 0.91
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 662 KII*LGTHNYLNYSANYGTNK 600
KII +NY NY+ NY + K
Sbjct: 302 KIISSNNYNYKNYNNNYNSKK 322
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 0.91
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 662 KII*LGTHNYLNYSANYGTNK 600
KII +NY NY+ NY + K
Sbjct: 313 KIISSNNYNYKNYNNNYNSKK 333
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 641 HNYLNYSANYGTN 603
+NY NY+ NY TN
Sbjct: 96 NNYNNYNNNYNTN 108
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 638 NYLNYSANYGTN 603
NY NY+ NY TN
Sbjct: 93 NYNNYNNNYNTN 104
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 638 NYLNYSANYGTN 603
NY NY+ NY TN
Sbjct: 93 NYNNYNNNYNTN 104
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 638 NYLNYSANYGTN 603
NY NY+ NY TN
Sbjct: 93 NYNNYNNNYNTN 104
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 638 NYLNYSANYGTN 603
NY NY+ NY TN
Sbjct: 93 NYNNYNNNYNTN 104
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 638 NYLNYSANYGTN 603
NY NY+ NY TN
Sbjct: 93 NYNNYNNNYNTN 104
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 638 NYLNYSANYGTN 603
NY NY+ NY TN
Sbjct: 93 NYNNYNNNYNTN 104
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 638 NYLNYSANYGTN 603
NY NY+ NY TN
Sbjct: 93 NYNNYNNNYNTN 104
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 641 HNYLNYSANYGTNKFASL*KQL 576
HN NY NY N + + K+L
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKL 112
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 641 HNYLNYSANYGTNKFASL*KQL 576
HN NY NY N + + K+L
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKL 112
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 641 HNYLNYSANYGTNKFASL*KQL 576
HN NY NY N + + K+L
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKL 112
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 641 HNYLNYSANYGTNKFASL*KQL 576
HN NY NY N + + K+L
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKL 112
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,317
Number of Sequences: 438
Number of extensions: 3569
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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