Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0220
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    25   0.71 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   3.8  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 81  CKL*LEKTQNLLKIISFCKSNG-CIV 155
           CK    +T N +  IS CK+NG C++
Sbjct: 25  CKSFFGRTYNNISSISECKNNGECVI 50


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1

Query: 586 TLNYFVRFWTDRSYP 630
           +++Y V+FWT + +P
Sbjct: 395 SVDYAVKFWTKKGFP 409


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +3

Query: 420 TDYFYFLLLLSIIGLCS-YTHF*YFTSGRNNYIVKIYLI 533
           +DYFYF   ++   L S Y+ F   T+  N+ ++   LI
Sbjct: 53  SDYFYFSFYITSYTLLSVYSLFRIATNENNSLVINKRLI 91


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +3

Query: 420 TDYFYFLLLLSIIGLCS-YTHF*YFTSGRNNYIVKIYLI 533
           +DYFYF   ++   L S Y+ F   T+  N+ ++   LI
Sbjct: 53  SDYFYFSFYITSYTLLSVYSLFRIATNENNSLVINKRLI 91


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
 Frame = -3

Query: 147 NRCSY-----KMKLFSVNFESSLIIVYRPHAMIGIEDYLFSKCFF 28
           NRC +     K+  F V  +S  +++       G + +LF KC F
Sbjct: 742 NRCKFSEFMTKLLEFDVKLQSDRLMIDYKTQKTGSKIHLFVKCVF 786


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 363 LKMTGLPRVSTVHASRVNFTDYFYFLLLLSIIGL 464
           + +TG    S      ++F DYF FLL   ++ +
Sbjct: 376 IAITGKNFFSITRGLILSFVDYFVFLLCSILVNI 409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,679
Number of Sequences: 336
Number of extensions: 3097
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)