Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0220
         (644 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036815-1|AAH36815.1|  319|Homo sapiens G protein-coupled recep...    31   4.6  
AF411849-1|AAL47763.1|  319|Homo sapiens H963 protein.                 31   4.6  
AF002986-1|AAC51846.1|  319|Homo sapiens platelet activating rec...    31   4.6  

>BC036815-1|AAH36815.1|  319|Homo sapiens G protein-coupled receptor
           171 protein.
          Length = 319

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 417 FTDYFYFLLLLSIIGLCSYTHF*YFTSGRNNYIVKIYLI 533
           FT +FY + L+ IIG C +  + +     N+  V IYLI
Sbjct: 17  FTYFFYLVFLVGIIGSC-FATWAFIQKNTNHRCVSIYLI 54


>AF411849-1|AAL47763.1|  319|Homo sapiens H963 protein.
          Length = 319

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 417 FTDYFYFLLLLSIIGLCSYTHF*YFTSGRNNYIVKIYLI 533
           FT +FY + L+ IIG C +  + +     N+  V IYLI
Sbjct: 17  FTYFFYLVFLVGIIGSC-FATWAFIQKNTNHRCVSIYLI 54


>AF002986-1|AAC51846.1|  319|Homo sapiens platelet activating
           receptor homolog protein.
          Length = 319

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 417 FTDYFYFLLLLSIIGLCSYTHF*YFTSGRNNYIVKIYLI 533
           FT +FY + L+ IIG C +  + +     N+  V IYLI
Sbjct: 17  FTYFFYLVFLVGIIGSC-FATWAFIQKNTNHRCVSIYLI 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,928,434
Number of Sequences: 237096
Number of extensions: 1580448
Number of successful extensions: 1923
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1920
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)