Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0219
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.9  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 217 CASQKVPCTSVILFIL*WRYFTVLYCYN 300
           C    VP T    F+L W +     CY+
Sbjct: 48  CVKDSVPMTCRYTFLLEWYHTLSKACYD 75


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 545 LIFVLCTLY*IEYLAFIGLVYM 480
           +IFV+C L   E + ++ LVY+
Sbjct: 258 VIFVICVLVQSEKIVWLHLVYI 279


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 461 FFLTCVTCKPNL 496
           F L C TCK N+
Sbjct: 957 FMLVCFTCKSNI 968


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 461 FFLTCVTCKPNL 496
           F L C TCK N+
Sbjct: 957 FMLVCFTCKSNI 968


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 461 FFLTCVTCKPNL 496
           F L C TCK N+
Sbjct: 957 FMLVCFTCKSNI 968


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 461 FFLTCVTCKPNL 496
           F L C TCK N+
Sbjct: 957 FMLVCFTCKSNI 968


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 193 GGRYDIFLCASQKVPCTSVILFIL*WRYFTVLYCY 297
           G +Y I         C  ++L +  WR FT+L  Y
Sbjct: 155 GIQYHICNTVISATVCFMMLLMLEIWRRFTILNNY 189


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 193 GGRYDIFLCASQKVPCTSVILFIL*WRYFTVLYCY 297
           G +Y I         C  ++L +  WR FT+L  Y
Sbjct: 151 GIQYHICNTVISATVCFMMLLMLEIWRRFTILNNY 185


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 542 IFVLCTLY*IEYLAFIGLVYM 480
           IF++C +   E +A++ L+Y+
Sbjct: 615 IFIICVIVQSEQIAWLHLLYI 635


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,457
Number of Sequences: 336
Number of extensions: 4205
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)