Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0218
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione tranfe...    24   4.4  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.8  

>AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione
           tranferase d9 protein.
          Length = 216

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 394 TGREKLVFHVSWLDAVLQDSA 456
           T R+KL+  V+ LD +LQ SA
Sbjct: 126 TDRQKLIEAVAVLDGILQHSA 146


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 445 AVQHPARRRGTRASPDRLIKTL 380
           A + P RR G +  PDR ++ L
Sbjct: 72  APKKPTRRAGVKPQPDRPMRAL 93


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -2

Query: 260  AKQRLTSHCRNPRMTLXTFYQMRQLLIIIRNSKIQADTDYV 138
            A  RL    RN +         R + ++I+N +I A  DY+
Sbjct: 2569 ADDRLVGFVRNDQFYSVWLDHERSVRLVIKNGEIVAAYDYL 2609


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -2

Query: 260  AKQRLTSHCRNPRMTLXTFYQMRQLLIIIRNSKIQADTDYV 138
            A  RL    RN +         R + ++I+N +I A  DY+
Sbjct: 2570 ADDRLVGFVRNDQFYSVWLDHERSVRLVIKNGEIVAAYDYL 2610


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,194
Number of Sequences: 2352
Number of extensions: 11560
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)