Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0216
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +2

Query: 371 SYILVINIVFIVAFFKDINL 430
           ++++ + +V+IVA FK+ NL
Sbjct: 441 TFLIALKLVWIVALFKNENL 460


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/27 (22%), Positives = 16/27 (59%)
 Frame = +2

Query: 365 RKSYILVINIVFIVAFFKDINLIFYSF 445
           R  Y+ ++ +VF+  +F  +  ++Y +
Sbjct: 134 RNDYVSLLQLVFVFCYFIYLFTVYYIY 160


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 150 ETSAMILTMFRNITDIFVFYNI 215
           E   +++T   N+TD+F+ Y +
Sbjct: 246 EIIIVVITYVLNLTDLFLVYGM 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,061
Number of Sequences: 336
Number of extensions: 2699
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)