Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0215
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    26   0.30 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.53 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.70 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.70 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = -3

Query: 627 IILKPVNLVNYKGLNKYFIPKKYQSTLNQNNATNTSRHSWTFHLEKLLSILYWLLVSYKM 448
           I  +PV L+    + +  + K +    N+N ATN S     FH   +     W  +  K+
Sbjct: 71  IFHQPVLLIRSPEILRKVLVKDFDKFTNRNIATNESADPLAFHTLFISKDAVWRNLRTKL 130

Query: 447 S 445
           S
Sbjct: 131 S 131


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -3

Query: 504 FHLEKLLSILYWLLVSYKMSFN*ECAWICAIL*RHNCQIEKN 379
           +H+E     LY + V +  +     AWICA++  +  +I +N
Sbjct: 23  WHVENPTYRLYKIFVVFSFAVTFFSAWICALVNYNVSEISEN 64


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 210 W*FFLYNLYSCLIYLDQYS 154
           W F L+ LYS L+ LD  S
Sbjct: 280 WSFLLFTLYSSLLLLDYVS 298


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 210 W*FFLYNLYSCLIYLDQYS 154
           W F L+ LYS L+ LD  S
Sbjct: 206 WSFLLFTLYSSLLLLDYVS 224


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 531 TNTSRHSWTFHLEKLLSILYWLLVSYKM 448
           T+T    +TF+L  L    YWLLV   M
Sbjct: 310 TDTLVVIYTFNLFYLCFCFYWLLVMVAM 337


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 531 TNTSRHSWTFHLEKLLSILYWLLVSYKM 448
           T+T    +TF+L  L    YWLLV   M
Sbjct: 266 TDTLVVIYTFNLFYLCFCFYWLLVMVAM 293


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 502 KCPTMPGCICCVILIKRGLVFFWYEIFI*TFIIYQINRL 618
           KC      +  ++L+K G V F++  F   F  +QI  L
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 502 KCPTMPGCICCVILIKRGLVFFWYEIFI*TFIIYQINRL 618
           KC      +  ++L+K G V F++  F   F  +QI  L
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 502 KCPTMPGCICCVILIKRGLVFFWYEIFI*TFIIYQINRL 618
           KC      +  ++L+K G V F++  F   F  +QI  L
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 502 KCPTMPGCICCVILIKRGLVFFWYEIFI*TFIIYQINRL 618
           KC      +  ++L+K G V F++  F   F  +QI  L
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,508
Number of Sequences: 336
Number of extensions: 2423
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)