Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0214
(673 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y230 Cluster: RuvB-like 2; n=107; Eukaryota|Rep: RuvB... 120 3e-26
UniRef50_Q4UBZ8 Cluster: DNA helicase (RuvB-like protein), putat... 92 1e-17
UniRef50_A3BLJ5 Cluster: Putative uncharacterized protein; n=2; ... 85 1e-15
UniRef50_Q97W00 Cluster: TATA binding protein (TBP)-interacting ... 83 6e-15
UniRef50_Q9Y265 Cluster: RuvB-like 1; n=91; Eukaryota|Rep: RuvB-... 78 2e-13
UniRef50_A5JZT2 Cluster: RuvB-like 1, putative; n=7; Plasmodium|... 76 7e-13
UniRef50_A7S8Z2 Cluster: Predicted protein; n=2; Nematostella ve... 75 2e-12
UniRef50_Q5KPZ8 Cluster: RuvB-like helicase 1; n=17; Eukaryota|R... 73 6e-12
UniRef50_Q8TZC3 Cluster: DNA helicase TIP49, TBP-interacting pro... 68 2e-10
UniRef50_Q6E6A5 Cluster: Putative uncharacterized protein; n=1; ... 67 3e-10
UniRef50_Q4U921 Cluster: RuvB-like DNA repair helicase, putative... 63 7e-09
UniRef50_Q8SU27 Cluster: Putative uncharacterized protein ECU11_... 55 2e-06
UniRef50_Q05CB6 Cluster: Spg3a protein; n=2; Murinae|Rep: Spg3a ... 48 2e-04
UniRef50_Q4N1R6 Cluster: DNA helicase RuvB, putative; n=1; Theil... 36 0.89
UniRef50_UPI00006D0E1D Cluster: Ubiquitin carboxyl-terminal hydr... 36 1.2
UniRef50_Q08FP2 Cluster: Virion core protein P4a; n=12; Poxvirid... 35 2.1
UniRef50_Q7QZQ5 Cluster: GLP_680_17611_16748; n=1; Giardia lambl... 33 6.3
UniRef50_P29569 Cluster: Cell division control protein 6 homolog... 33 8.3
>UniRef50_Q9Y230 Cluster: RuvB-like 2; n=107; Eukaryota|Rep:
RuvB-like 2 - Homo sapiens (Human)
Length = 463
Score = 120 bits (289), Expect = 3e-26
Identities = 56/85 (65%), Positives = 69/85 (81%)
Frame = +2
Query: 11 HGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAI 190
HGIP+DLLDR++IV+T+PYS+ + K IL IRCEEED +MS DA TVLTR+ ETSLRYAI
Sbjct: 344 HGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAI 403
Query: 191 QLITTASLVAKRRKAAEVSMEA*KR 265
QLIT ASLV ++RK EV ++ KR
Sbjct: 404 QLITAASLVCRKRKGTEVQVDDIKR 428
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1
Query: 244 QYGSVKKVYSLFLDEHRSEQFLKEYQDEFMFNDGSGD 354
Q +K+VYSLFLDE RS Q++KEYQD F+FN+ G+
Sbjct: 422 QVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELKGE 458
>UniRef50_Q4UBZ8 Cluster: DNA helicase (RuvB-like protein),
putative; n=1; Theileria annulata|Rep: DNA helicase
(RuvB-like protein), putative - Theileria annulata
Length = 492
Score = 92.3 bits (219), Expect = 1e-17
Identities = 43/86 (50%), Positives = 60/86 (69%)
Frame = +2
Query: 11 HGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAI 190
HGIPLD+LDR++I+ T PY + K I+ RC EED + D+L +L +VAT+ SLRYA+
Sbjct: 371 HGIPLDVLDRVLIIPTFPYQPEDTKLIITERCTEEDVDVEEDSLELLVKVATDISLRYAL 430
Query: 191 QLITTASLVAKRRKAAEVSMEA*KRS 268
QLIT +SL+ KR+ V+ + KRS
Sbjct: 431 QLITASSLIRKRKGGGSVTCDDIKRS 456
Score = 33.9 bits (74), Expect = 3.6
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 217 RQETEGG*GQYGSVKKVYSLFLDEHRSEQFLKEYQDEFMFND 342
R+ GG +K+ ++LFLD RS ++L +Q ++MF++
Sbjct: 440 RKRKGGGSVTCDDIKRSFNLFLDSKRSTKYLINFQHDYMFSE 481
>UniRef50_A3BLJ5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 957
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/82 (47%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 HGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMS-ADALTVLTRVATETSLRYA 187
HGIP D L+R++I+ T PY++ ++ +L+IRC+EED +MS A A +LT++ ET+LRYA
Sbjct: 189 HGIPPDFLNRLLIITTQPYTEDDIPKVLDIRCDEEDVEMSTAYAKVLLTKIGVETALRYA 248
Query: 188 IQLITTASLVAKRRKAAEVSME 253
I LIT+A+L ++ V ME
Sbjct: 249 IHLITSAALAWQKHMGKIVEME 270
Score = 41.5 bits (93), Expect = 0.018
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 256 VKKVYSLFLDEHRSEQFLKEYQDEFMFND 342
+ +VY LFLD RS Q+L EYQ ++MFN+
Sbjct: 272 ISRVYQLFLDVKRSAQYLMEYQSQYMFNE 300
>UniRef50_Q97W00 Cluster: TATA binding protein (TBP)-interacting
protein (TIP49-like), putative; n=20; Archaea|Rep: TATA
binding protein (TBP)-interacting protein (TIP49-like),
putative - Sulfolobus solfataricus
Length = 476
Score = 83.0 bits (196), Expect = 6e-15
Identities = 34/81 (41%), Positives = 57/81 (70%)
Frame = +2
Query: 11 HGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAI 190
HGIPLDLLDR++I+ T PY+ E+K+I+ IR +E + ++ AL LT++ E SLRY++
Sbjct: 368 HGIPLDLLDRLLIIPTRPYNADEIKEIIKIRADELEIELDPQALEELTKIGVENSLRYSV 427
Query: 191 QLITTASLVAKRRKAAEVSME 253
QL+ + ++A+R + + +E
Sbjct: 428 QLLEPSLIIAQRNNRSIIKVE 448
>UniRef50_Q9Y265 Cluster: RuvB-like 1; n=91; Eukaryota|Rep:
RuvB-like 1 - Homo sapiens (Human)
Length = 456
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/71 (49%), Positives = 52/71 (73%)
Frame = +2
Query: 11 HGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAI 190
HGIPLDLLDR++I+ T Y+ E+K I+ IR + E +S +AL L + T+T+LRY++
Sbjct: 348 HGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSV 407
Query: 191 QLITTASLVAK 223
QL+T A+L+AK
Sbjct: 408 QLLTPANLLAK 418
>UniRef50_A5JZT2 Cluster: RuvB-like 1, putative; n=7;
Plasmodium|Rep: RuvB-like 1, putative - Plasmodium vivax
Length = 583
Score = 76.2 bits (179), Expect = 7e-13
Identities = 34/73 (46%), Positives = 52/73 (71%)
Frame = +2
Query: 11 HGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAI 190
HGIP+DLLDR+IIV T Y++ E+ +L +RC+ E ++ +AL L + + SLRYAI
Sbjct: 475 HGIPVDLLDRIIIVKTMLYNKEEILQVLKLRCKFEKIKIENEALNYLADIGIQCSLRYAI 534
Query: 191 QLITTASLVAKRR 229
QL+T A +++KR+
Sbjct: 535 QLLTPAKILSKRK 547
>UniRef50_A7S8Z2 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 556
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +2
Query: 101 RCEEEDCQMSADALTVLTRVATETSLRYAIQLITTASLVAKRRKAAEVSMEA*KR 265
+CEEED +MS DA+ VLT++A ETSLRY+IQLIT ASLV ++RK EV+M+ KR
Sbjct: 458 KCEEEDVEMSDDAMMVLTKIAQETSLRYSIQLITAASLVCRKRKGTEVAMDDIKR 512
Score = 53.2 bits (122), Expect = 5e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +1
Query: 256 VKKVYSLFLDEHRSEQFLKEYQDEFMFNDGS 348
+K+VYSLF DE RS QFLKEYQ EFMFN+ S
Sbjct: 510 IKRVYSLFFDESRSTQFLKEYQQEFMFNEES 540
>UniRef50_Q5KPZ8 Cluster: RuvB-like helicase 1; n=17; Eukaryota|Rep:
RuvB-like helicase 1 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 484
Score = 72.9 bits (171), Expect = 6e-12
Identities = 33/80 (41%), Positives = 54/80 (67%)
Frame = +2
Query: 11 HGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAI 190
HG+P+DLLDR +IV T Y++ E++ I+ +RC+ E +S++A+ L +SLRYA+
Sbjct: 375 HGLPVDLLDRCMIVKTQLYTRDEIRRIVEMRCKVEGIAISSEAVDKLADEGERSSLRYAL 434
Query: 191 QLITTASLVAKRRKAAEVSM 250
QL+T A +V+K + EV +
Sbjct: 435 QLLTPAGIVSKNKGKGEVGV 454
>UniRef50_Q8TZC3 Cluster: DNA helicase TIP49, TBP-interacting
protein; n=1; Methanopyrus kandleri|Rep: DNA helicase
TIP49, TBP-interacting protein - Methanopyrus kandleri
Length = 455
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/72 (43%), Positives = 48/72 (66%)
Frame = +2
Query: 11 HGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAI 190
HGIP DLLDRM+I T P+ + E+ +I+ IR +D Q++ +A LT + E S+RYA
Sbjct: 341 HGIPGDLLDRMLIARTRPFERHEIHEIIGIRARVQDIQLTDEAHEYLTDLGEEKSIRYAT 400
Query: 191 QLITTASLVAKR 226
+L+ A +VA++
Sbjct: 401 RLLEPARIVAEK 412
>UniRef50_Q6E6A5 Cluster: Putative uncharacterized protein; n=1;
Antonospora locustae|Rep: Putative uncharacterized
protein - Antonospora locustae (Nosema locustae)
Length = 90
Score = 67.3 bits (157), Expect = 3e-10
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +2
Query: 32 LDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAIQLITTAS 211
LDR+I+V T YS++EL+ I+ +RCEEE M D L VL +AT L+YA+ L+T ++
Sbjct: 1 LDRVIVVRTDKYSENELRHIIKVRCEEESIGMDNDTLRVLVDIATRGGLKYALNLLTLSN 60
Query: 212 LVAKRR 229
+ A +R
Sbjct: 61 VRASKR 66
>UniRef50_Q4U921 Cluster: RuvB-like DNA repair helicase, putative;
n=8; Aconoidasida|Rep: RuvB-like DNA repair helicase,
putative - Theileria annulata
Length = 494
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +2
Query: 11 HGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAI 190
HGIP DLLDR++I+ T PY+ E+ IL IR + E+ +S L L + +SLRY I
Sbjct: 386 HGIPADLLDRLLIIKTVPYTIHEMVQILKIRSKVENVPISDQGLKRLGEIGLNSSLRYCI 445
Query: 191 QLITTASLV 217
QLI+ ++++
Sbjct: 446 QLISPSNVL 454
>UniRef50_Q8SU27 Cluster: Putative uncharacterized protein
ECU11_1270; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU11_1270 - Encephalitozoon
cuniculi
Length = 418
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/73 (35%), Positives = 45/73 (61%)
Frame = +2
Query: 11 HGIPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAI 190
+GIP D +DR +I++ + + +L+ IL R EED + DA+ L ++ + LRY++
Sbjct: 318 YGIPRDFIDRALIISMEKHCRRDLEAILRHRILEEDILIDDDAVDRLVSISEASGLRYSM 377
Query: 191 QLITTASLVAKRR 229
L+T +S+ A RR
Sbjct: 378 NLLTISSMRASRR 390
>UniRef50_Q05CB6 Cluster: Spg3a protein; n=2; Murinae|Rep: Spg3a
protein - Mus musculus (Mouse)
Length = 67
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/60 (36%), Positives = 39/60 (65%)
Frame = +2
Query: 44 IIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAIQLITTASLVAK 223
+I+ T Y+ E+K I I+ + E +S +AL+ L + T+T+ Y++QL+T A+L+AK
Sbjct: 1 MIIRTMLYTPQEMKQITEIQAQTEGINISEEALSHLGEIGTKTTPTYSVQLLTPANLLAK 60
>UniRef50_Q4N1R6 Cluster: DNA helicase RuvB, putative; n=1;
Theileria parva|Rep: DNA helicase RuvB, putative -
Theileria parva
Length = 434
Score = 35.9 bits (79), Expect = 0.89
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 11 HGIPLDLLDRMIIVATSPYSQSEL 82
HGIP DLLDR++I+ T PY+ E+
Sbjct: 410 HGIPADLLDRLLIIKTVPYTIHEV 433
>UniRef50_UPI00006D0E1D Cluster: Ubiquitin carboxyl-terminal hydrolase
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Ubiquitin carboxyl-terminal hydrolase family protein -
Tetrahymena thermophila SB210
Length = 4350
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = -3
Query: 443 ILRKVKLNSVICRKMFSFFY*DTSIITCDASPEPSLNINSSWYSFKNCSERCSSKNS 273
+LR + LNS K+++F Y + I C +P S N+N + SF S + +SK++
Sbjct: 1804 LLRAILLNS----KLYNFTYVPSQEIECQQNPRSSNNLNKTLKSFNKSSNQSNSKDN 1856
>UniRef50_Q08FP2 Cluster: Virion core protein P4a; n=12;
Poxviridae|Rep: Virion core protein P4a - Deerpox virus
W-848-83
Length = 915
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = +2
Query: 17 IPLDLLDRMIIVATSPYSQSELKDILNIRCEEEDCQMSADALTVLTRVATETSLRYAIQL 196
+PL++LD+++ VA +P S S + I NI + ++C ++D ++ ET + L
Sbjct: 706 MPLNILDKLVTVAGAPCSVSINELIDNISNDTDECDSTSDITEMINTALKETYTKRNTSL 765
Query: 197 IT 202
++
Sbjct: 766 VS 767
>UniRef50_Q7QZQ5 Cluster: GLP_680_17611_16748; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_680_17611_16748 - Giardia lamblia
ATCC 50803
Length = 287
Score = 33.1 bits (72), Expect = 6.3
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 422 SVLLCVKFIISMKH*GFYLNLLLVGREIFYTINSC-FFKSCNTTFLSLL 565
S+LL + ++S L LLL EI YT+ FFK+C T+ L+LL
Sbjct: 28 SILLLISVMLSTSSLENILALLLGIGEILYTVRPIIFFKTCTTSHLALL 76
>UniRef50_P29569 Cluster: Cell division control protein 6 homolog;
n=2; Methanothermobacter thermautotrophicus|Rep: Cell
division control protein 6 homolog - Methanobacterium
thermoformicicum
Length = 364
Score = 32.7 bits (71), Expect = 8.3
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +2
Query: 50 VATSPYSQSELKDILNIRCEE--EDCQMSADALTVLTRVATETS--LRYAIQLITTASLV 217
++ +PYS +L++ILN R E D + D + + +A + + RYA+ L++ A+ +
Sbjct: 179 ISFAPYSAPQLEEILNYRVEMAFNDGVLEDDVVPLCAALAAQRNGDARYALDLLSFAADI 238
Query: 218 AKRRKAAEVS 247
A R+ VS
Sbjct: 239 AIRQLKGVVS 248
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,561,338
Number of Sequences: 1657284
Number of extensions: 12461188
Number of successful extensions: 30262
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 29383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30257
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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