Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0213
         (629 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   6e-04
UniRef50_Q19398 Cluster: Putative uncharacterized protein; n=2; ...    35   1.4  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 19/21 (90%), Positives = 20/21 (95%)
 Frame = +3

Query: 411 LLLRWVDGLTAHLVLNGYWSP 473
           LLLRWVD LTAHLVL+GYWSP
Sbjct: 155 LLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q19398 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 286

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 232 IYCQNINITIQDKGTLLHLRTGKRSPP 312
           +YC+ +  + QD+  L HLR+G+R PP
Sbjct: 249 VYCREVGSSSQDRSHLTHLRSGERRPP 275


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,126,770
Number of Sequences: 1657284
Number of extensions: 12997806
Number of successful extensions: 24878
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24874
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)