Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0213
         (629 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       26   1.1  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    26   1.1  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    26   1.1  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   8.0  
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    23   8.0  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 339 QRSSTSCSPKCVIKMCSYNMQLF 407
           Q S   C P+CV   C +N Q +
Sbjct: 178 QLSEQHCCPQCVQSQCKFNDQFY 200


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +1

Query: 148 LVVSRVELSSKHI--TTHLSPNPKYN-YPCVIYCQN 246
           L +  V++ ++ +  T H  PNP YN YP     +N
Sbjct: 223 LYLDGVQIGTRQVGQTLHFGPNPSYNGYPTATLTKN 258


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +1

Query: 148 LVVSRVELSSKHI--TTHLSPNPKYN-YPCVIYCQN 246
           L +  V++ ++ +  T H  PNP YN YP     +N
Sbjct: 223 LYLDGVQIGTRQVGQTLHFGPNPSYNGYPTATLTKN 258


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 218 IIPVLYIVKT*TSRYKTKAPCYIS 289
           I  V + +K   S YKTK P Y++
Sbjct: 68  IARVYHTIKQLKSEYKTKNPLYLN 91


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 218 IIPVLYIVKT*TSRYKTKAPCYIS 289
           I  V + +K   S YKTK P Y++
Sbjct: 68  IARVYHTIKQLKSEYKTKNPLYLN 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,744
Number of Sequences: 2352
Number of extensions: 13790
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)