Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0212
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    26   0.33 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    26   0.33 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.4  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   7.1  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   7.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.4  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   9.4  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 374 ILFLKLYYKNDIIFNIVLGTIIKFKKIQLIIMLNELFVWY 255
           ILFL  Y    I+  + L  ++ F+ I +I+ +  +  WY
Sbjct: 229 ILFLITYATLQILVYLHLAVMLGFQDIYMIVYIIVVIFWY 268


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 374 ILFLKLYYKNDIIFNIVLGTIIKFKKIQLIIMLNELFVWY 255
           ILFL  Y    I+  + L  ++ F+ I +I+ +  +  WY
Sbjct: 229 ILFLITYATLQILVYLHLAVMLGFQDIYMIVYIIVVIFWY 268


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 445 YCYFNCIISVV 477
           YCY NC+I ++
Sbjct: 218 YCYINCLIYLI 228


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 335  FNIVLGTIIKFKKIQLIIMLNELFVWYGT*F 243
            F+I L  ++ +KK +   M+   +V+Y T F
Sbjct: 1193 FDIQLKQVVNYKKKKFQRMVVARYVYYATIF 1223


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 219 LIYRSFKIKLCTVPY 263
           L+Y+ F+++LC   Y
Sbjct: 90  LLYKDFQLRLCAALY 104


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 219 LIYRSFKIKLCTVPY 263
           L+Y+ F+++LC   Y
Sbjct: 90  LLYKDFQLRLCAALY 104


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +1

Query: 430 IIESCYCYFN 459
           +   CYCY+N
Sbjct: 269 VFSFCYCYYN 278


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 353 YKNDIIFNIVLGTIIKFKKIQLIIMLNELFV 261
           Y N  +F   + TI+      +++++N +FV
Sbjct: 70  YSNFSVFLFDIITIVTLTSTSILLIVNAVFV 100


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 483 VLNNRNNTIEITIARFNYS 427
           VL +R   +EI++   NYS
Sbjct: 219 VLGHRRRAVEISLTTGNYS 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,803
Number of Sequences: 336
Number of extensions: 2818
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)