Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0211
(688 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 169 4e-41
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 169 5e-41
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 150 4e-35
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 140 4e-32
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 130 3e-29
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 128 2e-28
UniRef50_UPI0001553738 Cluster: PREDICTED: hypothetical protein;... 116 7e-25
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 107 3e-22
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 103 5e-21
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 101 2e-20
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 99 1e-19
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 95 2e-18
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 91 3e-17
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 85 1e-15
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 84 4e-15
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 83 5e-15
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 83 6e-15
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 80 6e-14
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 79 1e-13
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 79 1e-13
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 79 1e-13
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 78 2e-13
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 78 2e-13
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 78 2e-13
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 77 3e-13
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 77 5e-13
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 77 5e-13
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 76 7e-13
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 76 9e-13
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 76 9e-13
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 76 9e-13
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 76 9e-13
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 75 1e-12
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 75 2e-12
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 75 2e-12
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 75 2e-12
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 75 2e-12
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 75 2e-12
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 75 2e-12
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 75 2e-12
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 74 3e-12
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 74 3e-12
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 74 3e-12
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 74 3e-12
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 74 3e-12
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 74 3e-12
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 74 3e-12
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 74 4e-12
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 74 4e-12
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 5e-12
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 73 7e-12
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 73 7e-12
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 73 9e-12
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 73 9e-12
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 73 9e-12
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 73 9e-12
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 73 9e-12
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 72 1e-11
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 72 1e-11
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 72 2e-11
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 2e-11
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 72 2e-11
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 72 2e-11
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 71 2e-11
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 2e-11
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 71 2e-11
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 71 2e-11
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 71 3e-11
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 71 3e-11
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 71 3e-11
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 71 3e-11
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 71 3e-11
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 71 4e-11
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 71 4e-11
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 71 4e-11
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 71 4e-11
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 70 5e-11
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 70 5e-11
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 70 5e-11
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 70 5e-11
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 70 6e-11
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 70 6e-11
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 70 6e-11
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 70 6e-11
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 70 6e-11
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 70 6e-11
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 70 6e-11
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 69 8e-11
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 8e-11
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 69 8e-11
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 8e-11
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 69 1e-10
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 69 1e-10
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 69 1e-10
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 69 1e-10
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 69 1e-10
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 69 1e-10
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 69 1e-10
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 69 1e-10
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 69 1e-10
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 69 1e-10
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 69 1e-10
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 68 2e-10
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 68 2e-10
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 68 2e-10
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 68 2e-10
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 68 2e-10
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 68 2e-10
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 67 3e-10
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 67 3e-10
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 67 3e-10
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 67 4e-10
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 67 4e-10
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 67 4e-10
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 67 4e-10
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 67 4e-10
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 66 6e-10
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 66 6e-10
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 66 6e-10
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 6e-10
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 6e-10
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 66 6e-10
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 66 6e-10
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 66 6e-10
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 66 6e-10
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 66 6e-10
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 66 6e-10
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 66 8e-10
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 66 8e-10
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 66 8e-10
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 66 8e-10
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 66 8e-10
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 66 8e-10
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 66 8e-10
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 66 8e-10
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 1e-09
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 66 1e-09
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 66 1e-09
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 66 1e-09
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 66 1e-09
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 66 1e-09
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 66 1e-09
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 66 1e-09
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 65 1e-09
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 65 1e-09
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 65 1e-09
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 65 1e-09
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 1e-09
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 65 1e-09
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 65 1e-09
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 65 1e-09
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 65 1e-09
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 65 1e-09
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 65 2e-09
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 2e-09
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 65 2e-09
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 65 2e-09
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 64 2e-09
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 64 2e-09
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 64 2e-09
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 64 2e-09
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 64 2e-09
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 64 2e-09
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 64 2e-09
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 64 2e-09
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 64 2e-09
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 64 2e-09
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 64 3e-09
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 3e-09
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 64 3e-09
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 64 3e-09
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 64 4e-09
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 64 4e-09
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 64 4e-09
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 64 4e-09
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 64 4e-09
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 64 4e-09
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 64 4e-09
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 64 4e-09
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_A4S461 Cluster: Predicted protein; n=1; Ostreococcus lu... 64 4e-09
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 64 4e-09
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 64 4e-09
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 64 4e-09
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 64 4e-09
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 64 4e-09
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 64 4e-09
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 63 5e-09
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 63 5e-09
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 63 5e-09
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 5e-09
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 63 5e-09
UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n... 63 5e-09
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 63 5e-09
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 63 5e-09
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 63 7e-09
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 63 7e-09
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 63 7e-09
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 63 7e-09
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 63 7e-09
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 63 7e-09
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 63 7e-09
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 63 7e-09
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 63 7e-09
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 62 9e-09
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 9e-09
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 62 9e-09
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 62 9e-09
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 62 9e-09
UniRef50_Q4N4Z2 Cluster: ATP-dependent RNA helicase, putative; n... 62 9e-09
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 62 9e-09
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 62 9e-09
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 62 1e-08
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 62 1e-08
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 62 1e-08
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 1e-08
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q4UDY7 Cluster: RNA helicase, putative; n=2; Theileria|... 62 1e-08
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 62 1e-08
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 62 1e-08
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 62 1e-08
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 1e-08
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 62 1e-08
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 62 2e-08
UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD (Asp-... 62 2e-08
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 62 2e-08
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 62 2e-08
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 62 2e-08
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 62 2e-08
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 62 2e-08
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 2e-08
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 62 2e-08
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 62 2e-08
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 62 2e-08
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 62 2e-08
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 61 2e-08
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 61 2e-08
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 61 2e-08
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 2e-08
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 61 2e-08
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 61 2e-08
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 61 2e-08
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 61 2e-08
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 61 2e-08
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 61 2e-08
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 61 3e-08
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 3e-08
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 61 3e-08
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 61 3e-08
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 61 3e-08
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 61 3e-08
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 61 3e-08
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 61 3e-08
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 60 4e-08
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 60 4e-08
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 60 4e-08
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 60 4e-08
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 60 4e-08
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 60 4e-08
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 60 5e-08
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 60 5e-08
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 60 5e-08
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 60 5e-08
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 60 5e-08
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 60 5e-08
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-08
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 60 5e-08
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 60 5e-08
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 60 7e-08
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 60 7e-08
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 60 7e-08
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 60 7e-08
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 60 7e-08
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 60 7e-08
UniRef50_A7RMK9 Cluster: Predicted protein; n=1; Nematostella ve... 60 7e-08
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 59 9e-08
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 59 9e-08
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 59 9e-08
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 59 9e-08
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 59 9e-08
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 59 9e-08
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 59 9e-08
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 59 9e-08
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 59 9e-08
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 59 9e-08
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 59 9e-08
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 59 1e-07
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 59 1e-07
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 59 1e-07
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 59 1e-07
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 59 1e-07
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 59 1e-07
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 59 1e-07
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 59 1e-07
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 59 1e-07
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 59 1e-07
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 59 1e-07
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 58 2e-07
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 58 2e-07
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 58 2e-07
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 58 2e-07
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 58 2e-07
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 58 2e-07
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 58 2e-07
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 58 2e-07
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 58 2e-07
UniRef50_Q5UQD1 Cluster: Putative ATP-dependent RNA helicase R45... 58 2e-07
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 58 2e-07
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 58 2e-07
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 58 2e-07
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 58 2e-07
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 58 2e-07
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 58 2e-07
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 58 2e-07
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 58 2e-07
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 58 2e-07
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 58 2e-07
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 58 2e-07
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 58 3e-07
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 58 3e-07
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 58 3e-07
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 58 3e-07
UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Re... 58 3e-07
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 58 3e-07
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 58 3e-07
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 58 3e-07
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 57 4e-07
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 57 4e-07
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 57 4e-07
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 57 4e-07
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 57 4e-07
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 57 5e-07
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 57 5e-07
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 57 5e-07
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 57 5e-07
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 57 5e-07
UniRef50_Q4Q552 Cluster: ATP-dependent RNA helicase, putative; n... 57 5e-07
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 57 5e-07
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 57 5e-07
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 57 5e-07
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 57 5e-07
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 56 6e-07
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 56 6e-07
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 56 6e-07
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 56 6e-07
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 56 6e-07
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 56 6e-07
UniRef50_Q54CH6 Cluster: Putative uncharacterized protein; n=1; ... 56 6e-07
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 56 6e-07
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 56 6e-07
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 56 6e-07
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 56 6e-07
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 56 6e-07
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 56 6e-07
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 56 6e-07
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 56 6e-07
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 56 8e-07
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 56 8e-07
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 56 8e-07
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 56 8e-07
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 56 8e-07
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 56 8e-07
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 56 8e-07
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 56 8e-07
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 56 8e-07
UniRef50_A7AU89 Cluster: DEAD/DEAH box helicase family protein; ... 56 8e-07
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 56 8e-07
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 56 8e-07
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 56 8e-07
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 56 8e-07
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 56 8e-07
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 56 8e-07
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 56 8e-07
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 56 1e-06
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 56 1e-06
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 56 1e-06
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 56 1e-06
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 56 1e-06
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 56 1e-06
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 56 1e-06
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 56 1e-06
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 56 1e-06
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 56 1e-06
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 56 1e-06
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 56 1e-06
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 55 1e-06
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 55 1e-06
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 55 1e-06
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 55 1e-06
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 55 1e-06
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 55 1e-06
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 55 1e-06
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 55 1e-06
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 55 1e-06
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 55 1e-06
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 55 1e-06
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 55 1e-06
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 55 1e-06
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 55 2e-06
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 55 2e-06
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 55 2e-06
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 55 2e-06
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 55 2e-06
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 55 2e-06
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 55 2e-06
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 55 2e-06
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 55 2e-06
UniRef50_A7ECJ8 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;... 55 2e-06
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 55 2e-06
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 55 2e-06
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 50 2e-06
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 54 2e-06
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 54 2e-06
UniRef50_A6G2A2 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 2e-06
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 54 2e-06
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 54 2e-06
UniRef50_Q54DN9 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 54 2e-06
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 54 2e-06
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 54 2e-06
UniRef50_A6SPM6 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 54 2e-06
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 54 2e-06
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 54 2e-06
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 54 3e-06
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 54 3e-06
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 3e-06
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 54 3e-06
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 54 3e-06
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 54 3e-06
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 54 3e-06
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 54 3e-06
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_Q9FVV4 Cluster: Putative DEAD-box ATP-dependent RNA hel... 54 3e-06
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 54 3e-06
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 54 3e-06
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 54 3e-06
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 54 3e-06
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 54 4e-06
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 4e-06
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 54 4e-06
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 54 4e-06
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 54 4e-06
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 54 4e-06
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 54 4e-06
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 54 4e-06
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 54 4e-06
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 53 6e-06
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 53 6e-06
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 53 6e-06
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 53 6e-06
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 53 6e-06
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 53 6e-06
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 53 6e-06
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 53 6e-06
UniRef50_A2E0F8 Cluster: DEAD/DEAH box helicase family protein; ... 53 6e-06
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 53 6e-06
UniRef50_Q2H0K3 Cluster: Putative uncharacterized protein; n=1; ... 53 6e-06
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 53 6e-06
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 53 6e-06
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 53 6e-06
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 53 8e-06
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 53 8e-06
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 169 bits (412), Expect = 4e-41
Identities = 83/110 (75%), Positives = 91/110 (82%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
V++ FMRDPVRILV+KEELTLEGIKQFYI +E EEWKL+TLCDLY+TL+I QAVIF NTR
Sbjct: 183 VTKKFMRDPVRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTR 242
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
RKVDWLTE MH RDFTVSA+HGDMD F GSSRVLITTDLL
Sbjct: 243 RKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLL 292
Score = 39.9 bits (89), Expect = 0.057
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +1
Query: 187 FKMLSADVQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQLN*KNGS 366
F+ LS ++QV+LLSATMP +VLE L +++ L + + F +N +
Sbjct: 160 FQKLSTNIQVVLLSATMPAEVLEVTKKFMRDPVRILVKKEELTLEGIKQF--YINVEREE 217
Query: 367 WKLCVTCMIH 396
WKL C ++
Sbjct: 218 WKLDTLCDLY 227
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 169 bits (411), Expect = 5e-41
Identities = 82/110 (74%), Positives = 91/110 (82%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
V++ FMRDP+RILV+KEELTLEGIKQFYI +E EEWKL+TLCDLY+TL+I QAVIF NTR
Sbjct: 224 VTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTR 283
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
RKVDWLTE MH RDFTVSA+HGDMD F GSSRVLITTDLL
Sbjct: 284 RKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLL 333
Score = 112 bits (270), Expect = 7e-24
Identities = 59/130 (45%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Frame = +1
Query: 10 VREDIRQLESGV-HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
VR ++++L++ H+VVGTPGRV+DM+ R L IK+FVLDEADEMLSRGFKDQI +
Sbjct: 141 VRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEI 200
Query: 187 FKMLSADVQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQLN*KNGS 366
F+ L+ +QV+LLSATMP DVLE L +++ L + + F +N +
Sbjct: 201 FQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQF--YINVEREE 258
Query: 367 WKLCVTCMIH 396
WKL C ++
Sbjct: 259 WKLDTLCDLY 268
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 150 bits (363), Expect = 4e-35
Identities = 69/105 (65%), Positives = 85/105 (80%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
FM DP+RILV+++ELTLEGIKQF++A+E EEWK +TLCDLYDTL+I QAVIFCNT+RKVD
Sbjct: 232 FMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVD 291
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
WLTE M +FTVS+MHGDM + F G+SRVLI+TD+
Sbjct: 292 WLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDV 336
Score = 107 bits (257), Expect = 3e-22
Identities = 55/129 (42%), Positives = 79/129 (61%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
V EDIR+L+ G HVV GTPGRV+DMI R+L IK+ VLDEADEML++GFK+QI V+
Sbjct: 146 VGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVY 205
Query: 190 KMLSADVQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQLN*KNGSW 369
+ L QV+L+SAT+P ++LE + L +R L + + F + + + W
Sbjct: 206 RYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--EREEW 263
Query: 370 KLCVTCMIH 396
K C ++
Sbjct: 264 KFDTLCDLY 272
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 140 bits (338), Expect = 4e-32
Identities = 60/80 (75%), Positives = 72/80 (90%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
FM DP+RILV+++ELTLEGIKQF++A+E EEWK +TLCDLYDTL+I QAVIFCNT+RKVD
Sbjct: 211 FMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVD 270
Query: 447 WLTESMHLRDFTVSAMHGDM 506
WLTE M +FTVS+MHGDM
Sbjct: 271 WLTEKMREANFTVSSMHGDM 290
Score = 107 bits (257), Expect = 3e-22
Identities = 55/129 (42%), Positives = 79/129 (61%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
V EDIR+L+ G HVV GTPGRV+DMI R+L IK+ VLDEADEML++GFK+QI V+
Sbjct: 125 VGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVY 184
Query: 190 KMLSADVQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQLN*KNGSW 369
+ L QV+L+SAT+P ++LE + L +R L + + F + + + W
Sbjct: 185 RYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--EREEW 242
Query: 370 KLCVTCMIH 396
K C ++
Sbjct: 243 KFDTLCDLY 251
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 130 bits (314), Expect = 3e-29
Identities = 62/109 (56%), Positives = 81/109 (74%)
Frame = +3
Query: 258 SRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRR 437
++ FM+DPV+IL+++EELT+EGI+QFYI E EE KLE+LC LY TL+I QAVIF NTR+
Sbjct: 175 TKMFMQDPVKILIKREELTMEGIQQFYIKTETEEKKLESLCGLYSTLTITQAVIFVNTRK 234
Query: 438 KVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
K +WLT+ + +DFTVS +H +M + F GSSRV ITTDLL
Sbjct: 235 KAEWLTQELMSKDFTVSVLHSEMGQSERDTTMKEFRSGSSRVFITTDLL 283
Score = 78.2 bits (184), Expect = 2e-13
Identities = 45/107 (42%), Positives = 64/107 (59%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
R+L + + VV + RV+D++ RA+ A I+L VLDEAD+ML GFKDQI +F L
Sbjct: 99 RELANQIQKVVLS--RVFDVLARRAVSAKAIRLLVLDEADQMLGNGFKDQIHEIFCKLPT 156
Query: 205 DVQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQ 345
+VQ ILLSATMP VLE + L +R+ L + + F ++
Sbjct: 157 NVQAILLSATMPAHVLEATKMFMQDPVKILIKREELTMEGIQQFYIK 203
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 128 bits (308), Expect = 2e-28
Identities = 59/110 (53%), Positives = 84/110 (76%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ FMRDP ILV+ ++LTL+GIKQFYIA++ EEWK +TL +LY+ + IAQA+I+CNT+
Sbjct: 291 ITKQFMRDPATILVKNDDLTLDGIKQFYIALDKEEWKFDTLVELYNNIEIAQAIIYCNTK 350
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
++VD L + + ++ TVSAMHG+MD + F G+SRVLITTDLL
Sbjct: 351 KRVDELRDKLIEKNMTVSAMHGEMDQQNRDLIMKEFRTGTSRVLITTDLL 400
Score = 99.5 bits (237), Expect = 7e-20
Identities = 47/81 (58%), Positives = 60/81 (74%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
+ED ++L GV VVVGTPGRV D+I + L + +KLF+LDEADEML RGFKDQI +F+
Sbjct: 210 KEDRKRLREGVQVVVGTPGRVLDLIQKKTLVTDHLKLFILDEADEMLGRGFKDQINKIFQ 269
Query: 193 MLSADVQVILLSATMPDDVLE 255
L D+QV L SATM ++LE
Sbjct: 270 NLPHDIQVALFSATMAPEILE 290
>UniRef50_UPI0001553738 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 490
Score = 116 bits (278), Expect = 7e-25
Identities = 56/76 (73%), Positives = 60/76 (78%)
Frame = +3
Query: 357 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*G 536
EWKL+TLCDLY+TL+I QAVIF NTRRKVDWLTE MH RDFTVSA+HGDMD
Sbjct: 350 EWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMR 409
Query: 537 SFVLGSSRVLITTDLL 584
F GSSRVLITTDLL
Sbjct: 410 EFRSGSSRVLITTDLL 425
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 107 bits (257), Expect = 3e-22
Identities = 52/77 (67%), Positives = 61/77 (79%)
Frame = +3
Query: 354 EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S* 533
+EWKL TLCDLY+TL+I QAVIF NTRRKVDWLTE++ +DFTVSAMHGDM+ +
Sbjct: 113 QEWKLPTLCDLYETLTITQAVIFVNTRRKVDWLTENLLGKDFTVSAMHGDMEQKTRDLVM 172
Query: 534 GSFVLGSSRVLITTDLL 584
F GSSR+LITTDLL
Sbjct: 173 KEFRSGSSRILITTDLL 189
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 103 bits (246), Expect = 5e-21
Identities = 49/114 (42%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
Frame = +3
Query: 249 IGVSRCFMRD-PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFC 425
I +S+ F+RD +ILV+KE+LTLEGI+QFYIAI+ E+ K + L +LY L+++Q+++FC
Sbjct: 244 IELSKQFLRDGTAKILVKKEQLTLEGIRQFYIAIQQEDQKFKVLVELYKNLTVSQSILFC 303
Query: 426 NTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLLG 587
N+++ VD L + + FTVS +H M+ + F G++R+L++TDL+G
Sbjct: 304 NSKKTVDDLYDKLTAEGFTVSKIHSQMEQKEREQVMQEFKKGAARILVSTDLMG 357
Score = 83.0 bits (196), Expect = 6e-15
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
E RE +Q GVH+++ TPGR+ DM+ + L A ++L V+DEAD+ML +GF D +
Sbjct: 166 ETREKCKQ---GVHIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFSDNFAEI 222
Query: 187 FKMLSADVQVILLSATMPDDVLE 255
KM+ D+Q+ L SAT P +++E
Sbjct: 223 LKMVPGDIQIALFSATFPQEIIE 245
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 101 bits (241), Expect = 2e-20
Identities = 48/106 (45%), Positives = 67/106 (63%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
F +P+ I+ ++ ELTLEGI+QF+I ++ E+WK ETLCDLY+ SI Q+VIFC T++K +
Sbjct: 216 FFNNPLVIMDKRNELTLEGIQQFFIQVDKEDWKFETLCDLYEIASITQSVIFCQTKQKCE 275
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
WL M +FTV +H M + G RVLI TD+L
Sbjct: 276 WLVNKMLESNFTVVQIHEGMSQQQRNEIMRDYKQGIKRVLIGTDIL 321
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/131 (27%), Positives = 73/131 (55%)
Frame = +1
Query: 4 HEVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXX 183
+ +++DI ++ GV +V+GTP RV++++ + + +K+ +LDEADEML K +
Sbjct: 128 NSIQDDISVVQQGVQIVLGTPDRVFELVQRKEISFAHLKMIILDEADEMLIDESKSLVYC 187
Query: 184 VFKMLSADVQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQLN*KNG 363
+FK L Q +L++AT+ D+L++++ + +R L + + F +Q++
Sbjct: 188 IFKYLPPKPQYVLVTATLSQDILDFIEKFFNNPLVIMDKRNELTLEGIQQFFIQVD--KE 245
Query: 364 SWKLCVTCMIH 396
WK C ++
Sbjct: 246 DWKFETLCDLY 256
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 98.7 bits (235), Expect = 1e-19
Identities = 46/110 (41%), Positives = 72/110 (65%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+ FM DP RIL++KE+LTLEGIKQFY+ ++ K + L D+Y ++SI +A+IF N++
Sbjct: 285 IMNTFMNDPFRILIKKEQLTLEGIKQFYVDVQETSNKFDCLLDIYGSVSIQKAIIFANSK 344
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
VD+++E + F V+ +H +D + F G++RVLI+TDLL
Sbjct: 345 NAVDYISEQLQQHGFGVAPIHAGLDQLERDRIMRDFRTGTARVLISTDLL 394
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/97 (30%), Positives = 51/97 (52%)
Frame = +1
Query: 46 HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVILL 225
H+ + TPGR D+I L K+ VLDEAD+MLS F +Q+ + + DVQ++L
Sbjct: 215 HICICTPGRALDLIVSGHLRVQNFKMAVLDEADQMLSDNFIEQVNDIMEYFPEDVQILLF 274
Query: 226 SATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNF 336
SAT+ + ++ + L +++ L + + F
Sbjct: 275 SATISQSIFHIMNTFMNDPFRILIKKEQLTLEGIKQF 311
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 94.7 bits (225), Expect = 2e-18
Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
Frame = +3
Query: 261 RCFMRDPVRILVQKEELTLEGI--KQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
R +M PV I+V ++E LEGI KQFY+ +E E+ KL+ LC L+DT+ I +++IF NTR
Sbjct: 237 RKYMNKPVEIIVPRDE-ELEGINVKQFYVNVEKEDCKLDKLCGLFDTMEITRSIIFVNTR 295
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLLG 587
LTE + + +TVSA+HG + + + F GSSR+LITTDL G
Sbjct: 296 HHAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDLRG 346
Score = 70.5 bits (165), Expect = 4e-11
Identities = 39/80 (48%), Positives = 50/80 (62%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
ED + L +GV V VGTP V M+ RAL + I++FVLDEADE+L RGFKDQI + +
Sbjct: 156 EDQQILSTGVQVAVGTPCHVLGMLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQF 214
Query: 196 LSADVQVILLSATMPDDVLE 255
L Q SA+M + LE
Sbjct: 215 LPTKTQFGFFSASMSHEALE 234
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 90.6 bits (215), Expect = 3e-17
Identities = 43/105 (40%), Positives = 67/105 (63%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
F+ DPV IL++KEE+ ++ IKQFYI++ +EE KL L D+++TL + Q +IFCNT RK +
Sbjct: 204 FLLDPVMILMRKEEINIDKIKQFYISVFIEENKLLALLDIFETLLVGQVLIFCNTIRKAN 263
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
W+ + +F V +HG + +F G +R L+TTD+
Sbjct: 264 WIHNKLLANNFNVGLIHGRVIQKERTNIFKNFRDGKTRALVTTDV 308
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/75 (41%), Positives = 51/75 (68%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
ED++ L+ H +VGTPGRV ++ +L I+ FVLDEAD ++++ FK I +++
Sbjct: 120 EDLKNLKKNFHGIVGTPGRVLHLLQIGSLAITKIRTFVLDEADILMNKNFKIDIFNIYRY 179
Query: 196 LSADVQVILLSATMP 240
L++ VQ+I+ SAT+P
Sbjct: 180 LNSKVQIIICSATIP 194
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/111 (39%), Positives = 66/111 (59%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+ ++ +R+ V I V ++ELTL GI Q+ + +E EEWK +TL D+Y +++I +AVIF N
Sbjct: 202 VELATAHLRNSVEIRVPRDELTLTGIDQYVVRVENEEWKFDTLIDIYQSIAIEKAVIFVN 261
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ K +WL M FTV+ +HG M F G +RVLI TD+
Sbjct: 262 SVEKGNWLKGKMVDSGFTVALVHGQMTMDDRAKITEEFRSGEARVLIATDV 312
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +1
Query: 19 DIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKML 198
D++ L+ G+H V GTPGR+ ++ + A ++ VLDEADEML+ FK I + + L
Sbjct: 127 DVKALQKGIHCVSGTPGRILQLLKEHNIQAEKVQSVVLDEADEMLT-SFKSTIMDILQKL 185
Query: 199 SADVQVILLSATMPDDVLEYLDA 267
Q ++++AT+ DV+E A
Sbjct: 186 -PHAQKVIVTATVSADVVELATA 207
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 83.8 bits (198), Expect = 4e-15
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ + +R L+SG H+VVGTPGRV D+IT LH + F+LDEADEML GF D + +
Sbjct: 135 ILDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIM 194
Query: 190 KMLSADVQVILLSATMPDDVLEYLD 264
+ Q +L SATMP V E ++
Sbjct: 195 EQAPESAQRVLFSATMPPMVKEIVE 219
Score = 40.3 bits (90), Expect = 0.043
Identities = 26/106 (24%), Positives = 52/106 (49%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
F+R+P + V T+ ++Q Y ++ E K E + L +T +++F TR+ +
Sbjct: 221 FLRNPECVDVAGSNQTVAKVEQQYWVVKGVE-KDEAMARLLETEETDASIVFVRTRQDTE 279
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
L + + R F +A+HGD+ + + G +L+ TD++
Sbjct: 280 RLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVV 325
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 83.4 bits (197), Expect = 5e-15
Identities = 40/80 (50%), Positives = 52/80 (65%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ IR L++GV +VVGTPGRV D+I ++L N I VLDEADEML+ GF D + +
Sbjct: 114 IDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIV 173
Query: 190 KMLSADVQVILLSATMPDDV 249
K L D Q +L SATMP +
Sbjct: 174 KSLKTDRQTLLFSATMPPQI 193
Score = 66.5 bits (155), Expect = 6e-10
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 VSRCFMRDPVR-ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 431
++R +M++ + I ++K LT+ I+QFY I+ + + ETLC + D A+IFC T
Sbjct: 196 LARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRD-RFETLCRVLDFDEPNAAIIFCKT 254
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
++ VD + E M R + V MHGDM + F GS L+ TD+
Sbjct: 255 KKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDFLVATDV 304
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 83.0 bits (196), Expect = 6e-15
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ +R L+ V VV+GTPGRV D I LH +++ +F+LDEAD+ML GF++ I +F
Sbjct: 114 IERQLRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIF 173
Query: 190 KMLSADVQVILLSATMPDDVLE 255
+ D Q IL SATMP +L+
Sbjct: 174 RDTPKDRQTILFSATMPQPILD 195
Score = 76.6 bits (180), Expect = 5e-13
Identities = 44/111 (39%), Positives = 61/111 (54%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+ ++R F RDP + + ++ELT+ I+Q YI + E KLE LC D + A++FCN
Sbjct: 194 LDITRRFQRDPQFVKITRKELTVPQIEQTYIEVR-ERDKLEALCRTLDMNNPELALVFCN 252
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
T+R VD L M R + V A+HGDM F GS VLI TD+
Sbjct: 253 TKRTVDDLMSRMQARGYFVEALHGDMKQQQRDRVMARFRSGSIDVLIATDV 303
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 82.2 bits (194), Expect = 1e-14
Identities = 35/82 (42%), Positives = 54/82 (65%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ IR+L GV +VVGTPGR+ D I+ R + + VLDEADEML+ GF D + +
Sbjct: 111 IDRQIRELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEIL 170
Query: 190 KMLSADVQVILLSATMPDDVLE 255
K +S + +++L SAT+PD +++
Sbjct: 171 KSVSTEKRMLLFSATLPDSIMK 192
Score = 43.2 bits (97), Expect = 0.006
Identities = 27/109 (24%), Positives = 52/109 (47%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ +MR+ I V++++LT Q + I + K E L + D +IFC T+
Sbjct: 193 LAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRD-KFELLSRIIDLEKEFYGLIFCKTK 251
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
VD ++ ++ + + +HGDM + + F VL+ TD+
Sbjct: 252 ADVDEVSSRLNEKGYAAEGLHGDMTQAQREKTLDKFKGRKINVLVATDV 300
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/83 (45%), Positives = 53/83 (63%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ E IRQL +G H++V TPGR+ D++ RAL + + V DEAD ML GFKD+I V
Sbjct: 123 IGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEVL 182
Query: 190 KMLSADVQVILLSATMPDDVLEY 258
K L + Q +L SAT+ D +L +
Sbjct: 183 KRLPSTRQTLLFSATLDDRMLSF 205
Score = 39.5 bits (88), Expect = 0.075
Identities = 28/111 (25%), Positives = 44/111 (39%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+ SR +R P I V + T I + ++ K LC L S Q++IF
Sbjct: 203 LSFSRRLLRSPQVIEVAQRNTTASSIVERVFNVDANR-KCAMLCHLITQESWLQSLIFSR 261
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
T++ D L + M A H D+ + +F G L+ TD+
Sbjct: 262 TKQGADALVKQMKQAGVAAEAFHADLSQAVREQVLAAFKAGEVTALVATDV 312
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 79.8 bits (188), Expect = 6e-14
Identities = 38/74 (51%), Positives = 47/74 (63%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD 207
QL+ GVH+VVGTPGRV D++ L + +K FVLDEADEMLS GF D + + D
Sbjct: 117 QLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQD 176
Query: 208 VQVILLSATMPDDV 249
Q L SATMP +
Sbjct: 177 RQTALFSATMPPSI 190
Score = 37.9 bits (84), Expect = 0.23
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
F+R PV + V++ + T I Q I K L + + A+IF TRR
Sbjct: 197 FLRSPVTVTVEQPKATPNKINQVAYLIPRHWTKARALQPILEMEDPETALIFVRTRRTAA 256
Query: 447 WLTESMHLRDFTVSAMHGDM 506
LT + +V HGD+
Sbjct: 257 ELTSQLQAAGHSVDEYHGDL 276
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+RQL G HV+VGTPGRV D I ++L+ +++ VLDEADEML GF D + + +
Sbjct: 157 LRQLARGAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTP 216
Query: 202 ADVQVILLSATMPDDV 249
A+ Q L SATMPD +
Sbjct: 217 AERQTALFSATMPDAI 232
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLS-IAQAVIFCNT 431
V+ ++R+P + ++ T+ +Q Y I + KL+ L + + A+IF T
Sbjct: 235 VAHRYLREPREVKIKASTTTVSTTRQRYCQISVAH-KLDALTRILEVEEDFDAAIIFVRT 293
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDM 506
+ L + + R ++ +A++GDM
Sbjct: 294 KTATVELADKLEARGYSAAALNGDM 318
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
E+ +R L +V+ TPGR+ D + ++H + IK+ VLDEADEML GF++ + +
Sbjct: 117 EIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEFI 176
Query: 187 FKMLSADVQVILLSATMPDDVL 252
K AD Q I+ SATM DDVL
Sbjct: 177 LKDTPADRQTIMFSATMTDDVL 198
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/107 (31%), Positives = 55/107 (51%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
F P I V ++L+ I+Q Y I+ E K E L L + ++ A++FCNT+ +VD
Sbjct: 204 FQNHPQIIDVTHQKLSAPKIEQIYYEIQ-ENAKGEALARLIEYRNVKLALVFCNTKAQVD 262
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLLG 587
+ E + R + A+HGD++ F GS +L+ TD+ G
Sbjct: 263 TVVELLKSRGYFAEALHGDLNQKQRDKVMSGFRKGSIEILVATDVAG 309
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/74 (50%), Positives = 48/74 (64%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+R L+ GVH +VGTPGRV D I + L + +K FVLDEADEML GF D I + + +
Sbjct: 125 LRPLKRGVHAIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDDIKWIMQRIP 184
Query: 202 ADVQVILLSATMPD 243
Q+ L SATMP+
Sbjct: 185 EQRQIALFSATMPN 198
Score = 41.5 bits (93), Expect = 0.019
Identities = 27/109 (24%), Positives = 48/109 (44%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ F+ P I ++ + T I Q Y + KLE L + + +IF T+
Sbjct: 203 IAKQFLNQPKIIKIKTKTETATTITQKYCMVGGLSNKLEALTRILEVTVFDAMIIFVRTK 262
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
LTE + R F+ A++GD+ + + G +LI TD+
Sbjct: 263 TLTTELTEKLSARGFSADAINGDIQQNQRERIINDYKQGKIDILIATDI 311
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 78.2 bits (184), Expect = 2e-13
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ IR L++G H+VVGTPGR+ D + R L+A+ + +LDEADEML+ GF++ I +
Sbjct: 110 IERQIRDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELIL 169
Query: 190 KMLSADVQVILLSATMPDDVL 252
L + Q +L SAT+ +L
Sbjct: 170 TRLPEERQTVLFSATLAPPIL 190
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/111 (26%), Positives = 60/111 (54%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+ +++ F +P I ++++ELT+ ++QFY ++ + K E + + D ++ +IFCN
Sbjct: 190 LALAKRFQNNPEIIKIERKELTISTVEQFYYLVKNSQ-KTEIVTQIIDLNNLQLMLIFCN 248
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
T+RKV+ +T+ + ++HGD F G + +L+ TD+
Sbjct: 249 TKRKVEEVTDELKAYGHNPISLHGDKTQRDRTEVMSKFRKGLANILVATDV 299
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/81 (43%), Positives = 52/81 (64%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ E +R LE G ++VGT GRV D I +L + ++ F+LDEADEML+ GF + I +F
Sbjct: 155 IAEQLRNLEQGGEIIVGTTGRVIDHIERGSLELSYLRYFILDEADEMLNMGFVEDIESIF 214
Query: 190 KMLSADVQVILLSATMPDDVL 252
+ D +V++ SATMP +L
Sbjct: 215 SHANKDARVLMFSATMPRQIL 235
Score = 41.5 bits (93), Expect = 0.019
Identities = 24/86 (27%), Positives = 43/86 (50%)
Frame = +3
Query: 324 IKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGD 503
I+QF + + K+E L L D ++FC T+ D + +S+ R + V+A+HGD
Sbjct: 260 IEQFMWVVRDAD-KIEALVRLIDVSDNFYGLVFCQTKADADTVAKSLDERHYHVAALHGD 318
Query: 504 MDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + F +R+L+ TD+
Sbjct: 319 IPQSQREKILERFRTKRARILVATDV 344
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/82 (41%), Positives = 52/82 (63%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ I+ L+ GV +++GTPGRV D I L N IK +LDEADEML GF++ I +
Sbjct: 113 IDRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYIL 172
Query: 190 KMLSADVQVILLSATMPDDVLE 255
+ + + Q +L SAT+P ++L+
Sbjct: 173 EDIPYERQFLLFSATLPQEILQ 194
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/105 (31%), Positives = 54/105 (51%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
+ +P + V K ELT ++Q Y ++ E+ KLE L L D +++FCNT+RKVD
Sbjct: 199 YQTNPEIVKVTKHELTTPDVEQKYFEVK-EDMKLELLSRLLDLHDFDLSLVFCNTKRKVD 257
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L + +R + +HGD+ F G+ +L+ TD+
Sbjct: 258 KLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKKGNIEILVATDV 302
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 77.4 bits (182), Expect = 3e-13
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ E + + G+H+VV TPGR+ DM+T + ++ + VLDEAD ML GF+D+I +F
Sbjct: 312 IGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIF 371
Query: 190 KMLSADVQVILLSATMP 240
A Q +L SATMP
Sbjct: 372 YFFKAQRQTLLFSATMP 388
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
E +++LE+G ++VGTPGR+YD I R L + + LDEADEML+ GF +++ +
Sbjct: 130 EQLQKLEAGAEIIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFFEEVTRILDN 189
Query: 196 LSADVQVILLSATMPDDV 249
L D Q +L SAT+P D+
Sbjct: 190 LPKDCQQLLFSATVPADI 207
Score = 37.5 bits (83), Expect = 0.30
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQ-FYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 431
+ R ++ DP IL+ +E ++E I Y A++ K L + + A++FCNT
Sbjct: 210 IIRDYLTDPETILLSGDEYSVENIHNVMYPAVDAYP-KPRNLLYMIEMEEPETAIVFCNT 268
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R + ++ + ++GD+ + G R ++ TD+
Sbjct: 269 RNDTSLVAAVLNRNGYDAELLNGDLPQKERERVMAKVKRGEVRFMVATDI 318
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 76.6 bits (180), Expect = 5e-13
Identities = 40/102 (39%), Positives = 59/102 (57%)
Frame = +3
Query: 276 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 455
DP I ++KEELTL I+Q+Y+ E + K + LC++Y +++I QA+IFC TRR WLT
Sbjct: 296 DPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLT 355
Query: 456 ESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
M VS + G++ F G +VLITT++
Sbjct: 356 VEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNV 397
Score = 53.2 bits (122), Expect = 6e-06
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +1
Query: 49 VVVGTPGRVYDM-ITXRALHANTIKLFVLDEADEML-SRGFKDQIXXVFKMLSADVQVIL 222
+++GTPG V D + + I++FVLDEAD M+ ++GF D + + L ++ Q++L
Sbjct: 218 IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLL 277
Query: 223 LSATMPDDVLEYLDAL 270
SAT D V + + +
Sbjct: 278 FSATFEDSVWHFAERI 293
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 76.2 bits (179), Expect = 7e-13
Identities = 39/102 (38%), Positives = 57/102 (55%)
Frame = +3
Query: 276 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 455
+P I +++EE TL+ I+QFYI +E K LC+LY L+IAQ ++FC TRR WL
Sbjct: 260 EPNYIRLKREEETLDNIRQFYIMCGSKEEKFSALCNLYGCLTIAQTIVFCQTRRMASWLA 319
Query: 456 ESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
ESM V + G+M + G +VL+TT++
Sbjct: 320 ESMTREGHQVGVLSGEMTVEQRAAVIERYREGKEKVLVTTNV 361
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +1
Query: 49 VVVGTPGRVYDMITX-RALHANTIKLFVLDEADEMLS-RGFKDQ 174
+VVGTPG VYD + L I +FVLDEAD M+S +G +DQ
Sbjct: 159 IVVGTPGTVYDWCAKQKVLDPKKITMFVLDEADVMISMQGHRDQ 202
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 75.8 bits (178), Expect = 9e-13
Identities = 37/78 (47%), Positives = 48/78 (61%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
+ + L+ GVHV+VGTPGRV D + L + +K VLDEADEML GF + + V +
Sbjct: 126 QQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRK 185
Query: 196 LSADVQVILLSATMPDDV 249
L A QV L SATMP +
Sbjct: 186 LPASRQVALFSATMPPQI 203
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/109 (22%), Positives = 52/109 (47%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ +++DP+ + + + T I+Q Y + KL+ L + + + +IF T+
Sbjct: 206 IAQTYLQDPIEVTIATKTTTAANIRQRYWWVSGLH-KLDALTRILEVETFDAMIIFVRTK 264
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ L E + R T +A++GDM + + G +L+ TD+
Sbjct: 265 AATEELAEKLQARGLTAAAINGDMQQAQRERTIHQLKDGKLDILVATDV 313
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 75.8 bits (178), Expect = 9e-13
Identities = 37/78 (47%), Positives = 47/78 (60%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
E ++QL SG VVVGTPGR+ D I L N +K F+LDEADEML GF + + +
Sbjct: 114 EYGRQLKQLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETI 173
Query: 187 FKMLSADVQVILLSATMP 240
+ L Q+ L SATMP
Sbjct: 174 LEKLPEKKQMALFSATMP 191
Score = 39.5 bits (88), Expect = 0.075
Identities = 21/109 (19%), Positives = 50/109 (45%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ ++ DP I ++ E T++ I+Q ++ + + K + L + + ++F T+
Sbjct: 197 IANTYLNDPASIEIRMETATVKSIEQRFLFASVHQ-KPDALIRVLEVEDYQGVIVFVRTK 255
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + E + A+HGD+ + F G+ +L+ TD+
Sbjct: 256 SSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDILVATDV 304
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 75.8 bits (178), Expect = 9e-13
Identities = 37/104 (35%), Positives = 61/104 (58%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+++ + +++++EE L IKQFY+ + K + +LY L++A +VIFC+T+ V W
Sbjct: 820 IKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMW 879
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L E+M R V +HGDM V + F G +VLITT++
Sbjct: 880 LYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNV 923
Score = 43.2 bits (97), Expect = 0.006
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +1
Query: 49 VVVGTPGRVYDMITX-RALHANTIKLFVLDEADEML-SRGFKDQIXXVFKML---SADVQ 213
+V+GTPG D + + + + I+ VLDEAD M+ +GF D ++ M+ S VQ
Sbjct: 741 IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQ 800
Query: 214 VILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQ 345
+L SAT + V+ + + + + +R+ + F +Q
Sbjct: 801 SMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQ 844
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 75.8 bits (178), Expect = 9e-13
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ I+ L GV +++GTPGRV D I + L + + L VLDEAD+ML GF++ I +
Sbjct: 113 IERQIKALSRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEIL 172
Query: 190 KMLSADVQVILLSATMPDDVLE 255
+ + Q ++LSAT P ++L+
Sbjct: 173 SHIPKERQTVILSATFPPEILD 194
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/111 (28%), Positives = 58/111 (52%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+ +SR F ++P+ + + +ELT+ I+Q+YI + E K +TL + + + +IFCN
Sbjct: 193 LDISRRFQKNPIDVKMVHQELTVPQIEQYYIEVR-EPAKADTLIRVLEFYQPQRTIIFCN 251
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
T+ VD ++ ++ F +HG M +F G +LI TD+
Sbjct: 252 TQIAVDAVSSALKAEGFLADGLHGGMAQAQRDKVMNAFRKGQLEILIATDV 302
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/116 (34%), Positives = 67/116 (57%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD 207
+++ GV +++GTPGRV D+++ + + I FVLDE D ML RGF+DQ+ +F+ LS
Sbjct: 232 RIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALS-Q 290
Query: 208 VQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQLN*KNGSWKL 375
QV+L SAT+ +V + +L + + + P K +N + ++ K KL
Sbjct: 291 PQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKL 346
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
RE LE+GV +VVGTPGR+ D + + + +K VLDEAD+ML GF D+I V +
Sbjct: 157 REQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVMR 216
Query: 193 MLSADVQVILLSATMPDDV 249
L Q +L SAT P+ +
Sbjct: 217 DLPGSRQTVLFSATFPESI 235
Score = 40.7 bits (91), Expect = 0.033
Identities = 29/109 (26%), Positives = 49/109 (44%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+SR + R +++++ EE L I+Q E + K L + +IFCNT+
Sbjct: 238 LSRKYQRHAQQVIIEDEEQNL--IEQLVYDSEDND-KTNVLMRILQQHPSDSTIIFCNTK 294
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
V + E ++ +HGDM+ F GS R+L+ TD+
Sbjct: 295 NAVAEIAERLNDLGAASGCLHGDMEQRERDRVMAMFRNGSHRILVATDV 343
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/82 (42%), Positives = 48/82 (58%)
Frame = +1
Query: 4 HEVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXX 183
H + + + L GV +V GTPGRV+D I+ L I+ VLDEAD ML GF DQ+
Sbjct: 109 HNINLETQILNKGVSIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVR 168
Query: 184 VFKMLSADVQVILLSATMPDDV 249
+ K L + +L SATMP ++
Sbjct: 169 IVKTLPKERITLLFSATMPPEI 190
Score = 46.4 bits (105), Expect = 7e-04
Identities = 28/109 (25%), Positives = 51/109 (46%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+ + +M +PV I ++ + T++ I Q Y + E K L L +IFCNT+
Sbjct: 193 ICKRYMNNPVTIEIESQTKTVDTIHQVYYRVNYNE-KNTQLNRLLIVEKPESCMIFCNTK 251
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
VD + + + ++ A+HGD+ + F G +L+ TD+
Sbjct: 252 AAVDRVQSFLGKKGYSSRALHGDIPQSKRLNTIQQFKQGKFHILVATDV 300
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+R+DI +L VH++VGTPGRV D+ + + + LF++DEAD+MLSR FK I +
Sbjct: 154 LRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQIL 213
Query: 190 KMLSADVQVILLSATMPDDVLEYL 261
L Q +L SAT P V E++
Sbjct: 214 SFLPPTHQSLLFSATFPLTVKEFM 237
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/94 (36%), Positives = 48/94 (51%)
Frame = +3
Query: 303 EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 482
EELTL+GI Q+Y +E E KL L L+ L I QA+IFCN+ +V+ L + + ++
Sbjct: 251 EELTLKGITQYYAFVE-ERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYS 309
Query: 483 VSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
H M F G R L+ +DLL
Sbjct: 310 CYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLL 343
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEEL-----TLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVI 419
V++ FMRDP++ILV+K++ + EGI I +E E+WKL+ CDLY+TL +A AV
Sbjct: 234 VTKKFMRDPIQILVKKKKKKRGVDSKEGIGPSCINMEREKWKLDPSCDLYETLIMAPAVR 293
Query: 420 FCNTRRKVDWLTESMH 467
F N+R+KVDWL S H
Sbjct: 294 FINSRKKVDWLIFSFH 309
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/83 (42%), Positives = 56/83 (67%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++R+ I++L+ +VVGTPGRV D + + L + ++ +LDEADEML GFK++I +
Sbjct: 109 DMRDQIKRLKDS-QIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEIDAL 167
Query: 187 FKMLSADVQVILLSATMPDDVLE 255
F+ +S DVQ+ L SAT V++
Sbjct: 168 FERVSPDVQIGLFSATTSPKVMQ 190
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/86 (44%), Positives = 51/86 (59%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
E IR L+ GV VVVGT GRV D I L + ++ VLDEADEML GF D + V
Sbjct: 117 EYGSQIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVKFV 176
Query: 187 FKMLSADVQVILLSATMPDDVLEYLD 264
+S + Q +L SAT+P D+ + ++
Sbjct: 177 LSHVSDECQRLLFSATIPTDIADIIE 202
Score = 41.1 bits (92), Expect = 0.025
Identities = 26/106 (24%), Positives = 53/106 (50%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
++R+P +I V+ + T + Q +I I+ K++ L L +T +IF T+
Sbjct: 204 YLRNPCKIQVKAKTKTANTVTQKFIVIKGFR-KIDALDRLLETEETDGVIIFVKTKTSTI 262
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
+T+++ + V+A++GDM + F S +L+ TD++
Sbjct: 263 EVTDNLKALGYKVAAINGDMQQSQREYIVDQFRSAKSDILVATDVV 308
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 74.5 bits (175), Expect = 2e-12
Identities = 31/79 (39%), Positives = 51/79 (64%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
++ + ++ G+HV+V TPGR+ ++I ++ N I + +LDEAD ML GF+ Q+ +
Sbjct: 190 KQQVELIQKGIHVIVATPGRLIELIDEGMVNLNKITMLILDEADRMLDMGFEPQVRDIVS 249
Query: 193 MLSADVQVILLSATMPDDV 249
+ D Q ILLSAT P++V
Sbjct: 250 TIREDRQTILLSATWPNEV 268
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/77 (45%), Positives = 48/77 (62%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ +RQLE+G +VVGTPGRV+D + L N + VLDEAD ML GF+ QI +
Sbjct: 154 MNRQLRQLENGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIERIM 213
Query: 190 KMLSADVQVILLSATMP 240
+ + Q +LLSAT+P
Sbjct: 214 RKCPRNRQTLLLSATLP 230
Score = 45.6 bits (103), Expect = 0.001
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ +M +PV I ++E+ ++ I+Q Y I ++ K+ L L QA+IFC T+
Sbjct: 236 LAESYMHEPVVIDCCRDEMAVDTIEQRYFTIAQDD-KVRLLESLLKREKPEQAIIFCRTK 294
Query: 435 RKVDWLTESM-HLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLLG 587
R D L + H A+HGD+ G+ + L+ TD++G
Sbjct: 295 RGTDRLHRKLSHEYGSACGAIHGDLQQRERDRVLQKLRDGNLKFLVATDVVG 346
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/77 (46%), Positives = 46/77 (59%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ IR L GV V+VGTPGR+ D I + A IK+ +LDEADEML GF D I +
Sbjct: 109 IERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAIL 168
Query: 190 KMLSADVQVILLSATMP 240
L+ Q +L SAT+P
Sbjct: 169 NTLTNRQQTLLFSATLP 185
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/92 (30%), Positives = 50/92 (54%)
Frame = +3
Query: 306 ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTV 485
E T+ I+Q Y + E K+E L + ++ QA++FC T+++VD + E ++ R +
Sbjct: 208 EKTVPAIRQVYYELPETE-KIEGLVSILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAA 266
Query: 486 SAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+HGDM + SF G + +L+ TD+
Sbjct: 267 KGLHGDMSQRERTQTIKSFKAGKTELLVATDV 298
>UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;
n=1; uncultured marine bacterium 66A03|Rep: Putative
cold-shock dead-box protein A - uncultured marine
bacterium 66A03
Length = 659
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R + R LESG H+VVGTPGR+ D I L + IK VLDEADEML GF++ + +
Sbjct: 115 RAERRTLESGAHIVVGTPGRLRDHIERGVLRLSDIKAVVLDEADEMLDMGFREDLTFILG 174
Query: 193 MLSADVQVILLSATMPDDVLE 255
+ + +L SAT+P +++
Sbjct: 175 KAPVERRTLLFSATVPTQIVK 195
Score = 42.3 bits (95), Expect = 0.011
Identities = 27/111 (24%), Positives = 54/111 (48%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+ +++ + +D VRI V ++ I I I+ + + + + +L ++ A++FCN
Sbjct: 194 VKLAKTYQKDSVRISVSSKKSQHLDISYHAIKIQPSD-RDKAVINLLRYHDVSGAIVFCN 252
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
TR V L + R F+V A+ G++ + S G + V + TD+
Sbjct: 253 TRAAVTHLASRLTNRGFSVVALSGELSQKERNFALQSMRAGKANVCVATDV 303
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+R + +L+ H+VVGTPGRV D++T RAL ++ VLDEAD ML GF+ I +
Sbjct: 114 LRSQMEKLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKIL 173
Query: 190 KMLSADVQVILLSATMPDDV 249
+ + Q +LLSAT+P +
Sbjct: 174 RRCPEERQTLLLSATVPPTI 193
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/107 (26%), Positives = 55/107 (51%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
+MR+P ++ ++ E I+Q Y ++ + K + L +L +A++FC T+R +
Sbjct: 200 YMRNPEKVDFSPTNISAETIEQRYFTVDHSK-KFDMLVELLKREQPQKAIVFCRTKRGTE 258
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLLG 587
+T+ + + V +HGDM + + F RVL+ TD++G
Sbjct: 259 RITQRLSKKTKLVHCIHGDMQQGARNRALSDFKASKFRVLVATDVVG 305
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I L SGV ++VGTPGR+ D+ + L + ++ VLDEAD ML GF D + + +L
Sbjct: 226 IEALRSGVEILVGTPGRLLDLAKQKHLKLDRVRALVLDEADRMLDLGFLDDVERILAILP 285
Query: 202 ADVQVILLSATMPDDVL 252
D Q +L SATMPD ++
Sbjct: 286 EDRQTMLFSATMPDPIV 302
Score = 39.9 bits (89), Expect = 0.057
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEW-KLETLCDLYDTLSIAQAVIFC 425
+ +SR F+R PV I T + +A K+E + + +IF
Sbjct: 302 VALSRRFLRRPVTIHAGHTAETGPSPQTQQLAYRTHSLNKIEIVARILQARGRGLTMIFT 361
Query: 426 NTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
T+R D + + R F V+A+HGD+ + + + +F G L+ TD+
Sbjct: 362 RTKRAADRVAADLDFRGFAVAAVHGDLGQGARERALRAFRTGKIDTLVATDV 413
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++ IR L+ HV+VGTPGR+ D I L + VLDEADEML+ GF + I +
Sbjct: 109 DIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAI 168
Query: 187 FKMLSADVQVILLSATMPDDV 249
+ A+ Q +L SATMPD +
Sbjct: 169 LSHVPAERQTLLFSATMPDPI 189
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/109 (29%), Positives = 61/109 (55%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ FM +P + V+ +E+T+ I+Q+Y+ + E+ K + L L D + A++F T+
Sbjct: 192 IAERFMNEPELVKVKAKEMTVPNIQQYYLEVH-EKKKFDILTRLLDIQAPELAIVFGRTK 250
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R+VD L E+++LR + +HGD+ F G+ +L+ TD+
Sbjct: 251 RRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDV 299
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS--A 204
LE H+VVGTPGRV MI L + IKLFV+DEADEML GF++Q+ +F+ ++
Sbjct: 153 LEKKPHIVVGTPGRVEHMININELSMDNIKLFVIDEADEMLKAGFQEQVKSIFRRITNKD 212
Query: 205 DVQVILLSATMPDDVL 252
+VQ+ + SAT ++ L
Sbjct: 213 EVQIAMFSATYDEEEL 228
Score = 33.1 bits (72), Expect = 6.5
Identities = 27/121 (22%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEE-----------WKLETLCDLYDTLS 401
VS + +PV I ++ + TL+GI+Q++I + E KL TL D++
Sbjct: 230 VSEEILINPVIIDLRYNDQTLKGIRQYFIDLRKEPPFRKGREDYLLPKLVTLYDIFRKQR 289
Query: 402 IAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ Q+++F N++ + + + ++ + ++ + + F G+ R LI++ L
Sbjct: 290 LGQSIVFINSKEDARIVYDWLIRHEWECELISAELTQAERERTLNRFRGGTGRCLISSGL 349
Query: 582 L 584
L
Sbjct: 350 L 350
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ IR L GV VV+GTPGR+ D + L + +++ VLDEADEML GF + I +
Sbjct: 114 IERQIRSLRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKIL 173
Query: 190 KMLSADVQVILLSATMPDDV 249
+ A+ Q +L SATMP ++
Sbjct: 174 QNTPAERQTLLFSATMPPEI 193
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/105 (29%), Positives = 55/105 (52%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
+MRDP+ I V ++LT+ I Q++ + +K E L + D ++ + + FC T++ VD
Sbjct: 200 YMRDPITISVTPQQLTVPQIDQYFCEVR-PSFKTEALTRILDIENVERGICFCRTKKGVD 258
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L E++ R + +HGDM+ F G +L+ TD+
Sbjct: 259 ELVEALQARGYQAEGIHGDMNQAQRNRVMSRFKEGYIELLVATDV 303
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/81 (45%), Positives = 48/81 (59%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
+ R I L GV VVVGTPGRV D + L + + VLDEADEML GF D + +
Sbjct: 179 DFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWI 238
Query: 187 FKMLSADVQVILLSATMPDDV 249
+ L + QV+L SATMP ++
Sbjct: 239 LEQLPKERQVVLFSATMPPEI 259
Score = 34.3 bits (75), Expect = 2.8
Identities = 24/109 (22%), Positives = 51/109 (46%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+S+ ++ DP + ++ ++ + I+Q I + + KLE L + D +IF T+
Sbjct: 262 LSKRYLNDPAEVTIKTKDQDGKLIRQRAITVPMSH-KLEALQRVLDACGGEGVIIFARTK 320
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ E++ V+ ++GD+ + + GS VL+ TD+
Sbjct: 321 VITLTVAETLEAAGHQVAVLNGDVPQNQRERTVERLRSGSVDVLVATDV 369
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 73.7 bits (173), Expect = 4e-12
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ F+ PVRILV++EELTLEGI+QF++ +E E +VIF NTR
Sbjct: 138 ITKKFINKPVRILVKREELTLEGIRQFHVNVERE------------------SVIFANTR 179
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMD 509
RKVD T+ + RD TVSA HGDMD
Sbjct: 180 RKVDCFTDQLRSRDHTVSATHGDMD 204
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
+ R I L+ V VVVGTPGR+ D I N+I VLDEADEML+ GF + I +
Sbjct: 160 DYRNQIYALKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWI 219
Query: 187 FKMLSADVQVILLSATMPDDV 249
L + Q++L SATMP+++
Sbjct: 220 IDQLPKNKQMVLFSATMPNEI 240
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ + I++L+ HVVV TPGR+ D++ L + +K VLDEADEM++ GFK +I +
Sbjct: 10 IDDQIQKLKRATHVVVATPGRLIDLLNRGVLSLDDLKYLVLDEADEMINMGFKAEIDEIL 69
Query: 190 KMLSADVQVILLSATMPDDV 249
K + +L +ATMP DV
Sbjct: 70 KSCKPAITKLLFTATMPKDV 89
Score = 36.3 bits (80), Expect = 0.70
Identities = 25/109 (22%), Positives = 47/109 (43%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+ + D I + KEEL E I+ + + E KL+ L + + ++FC T+
Sbjct: 93 IEEYLVADASEIRINKEELVNEKIQHYLLMFE-NGMKLDYLKAFLNERLDQRGILFCRTK 151
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L + + D A+HG+++ S + F +L+ TD+
Sbjct: 152 IAAKRLAKQLAGFDVVAGAIHGNLNQESREKVLRGFKKNRINLLVATDI 200
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++ IR L+ H++VGTPGR+ D I + L ++ VLDEADEML+ GF + I +
Sbjct: 109 DINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAI 168
Query: 187 FKMLSADVQVILLSATMPDDV 249
+ Q +L SATMPD +
Sbjct: 169 LTDVPETHQTLLFSATMPDPI 189
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/109 (33%), Positives = 63/109 (57%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ FM +P I V+ +E+T+ I+QFY+ ++ E+ K + L L D S A++F T+
Sbjct: 192 IAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQ-EKKKFDVLTRLLDIQSPELAIVFGRTK 250
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R+VD L+E+++LR + +HGD+ F GS VL+ TD+
Sbjct: 251 RRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 72.5 bits (170), Expect = 9e-12
Identities = 35/75 (46%), Positives = 44/75 (58%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L G VVVGTPGR+ D I L +++ VLDEADEML GF++ I + + V
Sbjct: 121 LRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWV 180
Query: 211 QVILLSATMPDDVLE 255
Q SATMPD +LE
Sbjct: 181 QSAFFSATMPDGILE 195
Score = 52.8 bits (121), Expect = 8e-06
Identities = 27/109 (24%), Positives = 57/109 (52%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++R F+R+P + V + +LT+ +Q + + +++ +C ++D +A++F T+
Sbjct: 196 LARRFLREPELLRVTRRQLTVANTEQAWFEVRPFR-RVDAVCRIFDAYIPRKAIVFRATK 254
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ VD L ++ R A+HGD++ + F G VL+ TD+
Sbjct: 255 QGVDELAAALQQRGILADALHGDLNQTQRERVMSRFRAGGISVLVATDV 303
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 72.5 bits (170), Expect = 9e-12
Identities = 35/70 (50%), Positives = 44/70 (62%)
Frame = +1
Query: 46 HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVILL 225
+++VGTPGR+ D I + L + IK VLDEADEML GFK + VF+ Q +L
Sbjct: 121 NIIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTLLF 180
Query: 226 SATMPDDVLE 255
SATMP VLE
Sbjct: 181 SATMPKQVLE 190
Score = 37.1 bits (82), Expect = 0.40
Identities = 26/109 (23%), Positives = 48/109 (44%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ + +PV I+V K + I Q Y+ + K + L LY L +++IF NT+
Sbjct: 191 IANNYQTNPVEIVVTKNVIEQNNISQHYVNA-ISYHKEDVLIALYKHLQPKRSIIFSNTK 249
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + E + ++GD + F G RV++ TD+
Sbjct: 250 VFTNKIAEMLTNNGIPCCIINGDKSRYERGQAMRLFRDGKVRVMVATDV 298
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 72.5 bits (170), Expect = 9e-12
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
V ++ L +G V+V TPGR+ D++ AL N + VLDEAD MLS GF D++ V
Sbjct: 125 VNLQMQSLRAGADVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVL 184
Query: 190 KMLSADVQVILLSATMPDDV 249
+ L A Q +L SAT P++V
Sbjct: 185 EALPAKKQTLLYSATFPEEV 204
>UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=3;
Paramecium tetraurelia|Rep: Nucleolar RNA helicase II,
putative - Paramecium tetraurelia
Length = 664
Score = 72.5 bits (170), Expect = 9e-12
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++R I Q+ G +VVGTPGR+ D++ + L + I++ VLDEAD+ML+ GF++ I +
Sbjct: 137 DLRNQIDQVRQGCEIVVGTPGRIQDLLERKVLKLDEIQVVVLDEADQMLNFGFQENIEKI 196
Query: 187 FKMLS-ADVQVILLSATMPDDVLE 255
+ +Q++L SAT+PD V E
Sbjct: 197 MSYFNERKIQMLLFSATIPDWVKE 220
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 72.5 bits (170), Expect = 9e-12
Identities = 36/109 (33%), Positives = 63/109 (57%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ FM +P + V+ +E+T+ I+QFY+ ++ E K +TL L D S A++F T+
Sbjct: 193 IAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQ-ERKKFDTLTRLLDIQSPELAIVFGRTK 251
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R+VD L E+++LR + +HGD+ + F G+ VL+ TD+
Sbjct: 252 RRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDV 300
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++ IR L+ +++VGTPGR+ D I R + N + V+DEADEML+ GF D I +
Sbjct: 110 DIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESI 169
Query: 187 FKMLSADVQVILLSATMP 240
+ ++ Q +L SATMP
Sbjct: 170 LSNVPSEHQTLLFSATMP 187
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ ++ L G +VV TPGR+ D++ AL +K VLDEAD ML GF D++ +
Sbjct: 115 INPQMQSLSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDIL 174
Query: 190 KMLSADVQVILLSATMPDDVLEYLDAL 270
+VQ +L SAT PD V E + L
Sbjct: 175 DQTPGNVQTLLFSATFPDKVKELTEEL 201
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I +++ VH++V TPGR+ D++ L IK +LDEADE+L GF + I + +
Sbjct: 113 IARVKQTVHILVATPGRLIDLLYEGILSFARIKCVILDEADELLKVGFLEDIEFILSCIR 172
Query: 202 ADVQVILLSATMPDDVLEYL-DAL*EILYAYLYRRKSLPWKVLNNFT 339
Q +L SATMPDD+ + D L E Y L ++S P + + F+
Sbjct: 173 HKHQTLLFSATMPDDIKKLTQDCLHEPQYISLVTKRSAPESIEHYFS 219
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 DIRQLESG-VHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
D++ L G V VV+GTPGR+ D+I AL + ++ FVLDE D ML FK+ I ++
Sbjct: 80 DLKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVLDEVDVMLDMNFKEDIDFIYSQ 139
Query: 196 LSADVQVILLSATMPDDVLE 255
L + QV +SAT P +V E
Sbjct: 140 LPEEKQVFFVSATFPKEVRE 159
Score = 38.3 bits (85), Expect = 0.17
Identities = 28/109 (25%), Positives = 51/109 (46%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+S + + P I V+ EL + ++ + E K+E L D+ + + ++F N +
Sbjct: 160 LSHRYTKKPEFIKVESRELEPQIEERLLRVYSIRE-KIELLEDVLRDFN--KVIVFVNRK 216
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R +L E + + F V A+HGD+ + F G VL+ TD+
Sbjct: 217 RDAKFLGEKLSTKGFRVGALHGDLPQRRREEILKKFRRGFINVLVATDV 265
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/81 (43%), Positives = 46/81 (56%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
E RE + L G V+VGTPGRV D + +L + + VLDEADEML GF D + V
Sbjct: 117 EYREQLSGLRRGAQVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFIDDVKRV 176
Query: 187 FKMLSADVQVILLSATMPDDV 249
D Q + SAT+PD++
Sbjct: 177 VSDTPKDAQRVFFSATLPDEI 197
Score = 53.2 bits (122), Expect = 6e-06
Identities = 34/105 (32%), Positives = 53/105 (50%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
++ DP+RI ++ + T EGI+Q + IE KLE L L + + A++F TR
Sbjct: 204 YLVDPLRIAIETKTKTAEGIEQRLVRIEGGA-KLEALSRLLEVEPVDAAIVFVRTRAACT 262
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L E + LR +A+ GD+D + + G VLI TD+
Sbjct: 263 TLVEQLLLRGVNAAALSGDLDQSLRERTVERLKRGKVDVLIATDV 307
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/81 (38%), Positives = 52/81 (64%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++R++ R LE G H+VVGTPGR+ D I + + I+ VLDEADEML GF++++ +
Sbjct: 114 DMRDERRALERGAHIVVGTPGRLVDHINRGSFDTSAIRAVVLDEADEMLDLGFREELELI 173
Query: 187 FKMLSADVQVILLSATMPDDV 249
+ + + ++ SAT+P +
Sbjct: 174 LEDTPKERRTLMFSATVPKGI 194
Score = 35.9 bits (79), Expect = 0.93
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 411 AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
A++FC+TR V+ L + R F+V A+ G+ + S G +RV I TD+
Sbjct: 248 AIVFCSTRASVNHLVARLGNRGFSVVALSGEFSQKERANALSSLRSGRARVCIATDV 304
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ + I + G +++VGTPGR D+I L+ + + FVLDEADEML GF + I +
Sbjct: 109 INKQIELILRGANIIVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKII 168
Query: 190 KMLSADVQVILLSATMPDDVLE 255
+L + Q L SAT+P +++E
Sbjct: 169 NVLPVERQSFLFSATIPSEIIE 190
Score = 41.5 bits (93), Expect = 0.019
Identities = 24/86 (27%), Positives = 43/86 (50%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
I +++ FM + + + K+E+T+ GI Y A+ E KL TL D +++IF
Sbjct: 189 IELAKGFMHNEEILFLSKDEVTVNGIDHNY-AVSRRERKLRTLFSYIDKYKPEKSIIFSR 247
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDM 506
T+ + + E++ MHGD+
Sbjct: 248 TKAGANMIYEALINHGQDAVIMHGDL 273
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/79 (41%), Positives = 51/79 (64%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
RQ H+ VGTPGR+ +I L TI+LFVLDEAD++L F++Q+ ++ LS
Sbjct: 79 RQKLKKCHIAVGTPGRIKQLIEYEVLKTGTIRLFVLDEADKLLDDTFQEQVNWIYNHLSD 138
Query: 205 DVQVILLSATMPDDVLEYL 261
+ Q++ LSAT P+ + ++L
Sbjct: 139 NKQMLALSATYPEYLAKHL 157
Score = 33.5 bits (73), Expect = 4.9
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAI-------ELEEWKLETLCDLYDTLSIAQAVIFC 425
+MR+P+ + + ++L L GIKQ Y+ + + E K+ L + +S Q +IF
Sbjct: 160 YMREPMFVRLNPKDLALRGIKQLYVELPGHSLPNKAFEIKVIKLLKILTQVSFNQCLIFS 219
Query: 426 NTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
N + + L + + + + G + + R+LI+TDL
Sbjct: 220 NLQTRAQNLCDILCDSGWPSECISGAQEQSQRLSAMAKLKKFQCRILISTDL 271
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/74 (45%), Positives = 45/74 (60%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD 207
+L+ H+VVGTPGRV D I L +K V+DEADEML+ GF DQ+ + L
Sbjct: 118 ELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTK 177
Query: 208 VQVILLSATMPDDV 249
+L SAT+P+DV
Sbjct: 178 RMTMLFSATLPEDV 191
Score = 40.7 bits (91), Expect = 0.033
Identities = 28/109 (25%), Positives = 47/109 (43%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+SR +M P I ++ +T + I+ + EE KL L D+ + +IFC T+
Sbjct: 194 LSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEE-KLSLLKDVTTIENPDSCIIFCRTQ 252
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
VD + + ++ +HG M F G R L+ TD+
Sbjct: 253 ENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDV 301
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/75 (46%), Positives = 46/75 (61%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
++L+ HVVVGTPGR+ D + + IK V+DEADEM + GF DQI + K LS
Sbjct: 117 KELKQKTHVVVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSK 176
Query: 205 DVQVILLSATMPDDV 249
+LLSATMP +
Sbjct: 177 KRVTMLLSATMPSAI 191
Score = 52.8 bits (121), Expect = 8e-06
Identities = 28/109 (25%), Positives = 56/109 (51%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+S +M+DP+ +++E ++ I Q +E + K++ L D+ + +IFCNT+
Sbjct: 194 LSNRYMKDPIHAEIEEESSAVDRISQERYTVEYRD-KMKLLSDITIVENPDSCIIFCNTK 252
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
++VD + + + ++T +HG M+ F G R L+ TD+
Sbjct: 253 QRVDEVNDELIRLNYTCEKIHGGMEQRDRVRVMNEFKQGYFRYLVATDV 301
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I+ L+ H++VGTPGRV D + R + +KL VLDEAD ML GF+D + +F
Sbjct: 117 IQSLKHSPHIIVGTPGRVMDHVEKRRIDLRNVKLRVLDEADRMLDMGFEDDLRIIFGQTP 176
Query: 202 ADVQVILLSATMPDDV 249
VQ +L SAT + +
Sbjct: 177 KQVQTLLFSATFTEQI 192
Score = 33.1 bits (72), Expect = 6.5
Identities = 24/109 (22%), Positives = 49/109 (44%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
V++ ++ +PV V+ +E I Q + L + + L + A++FCN +
Sbjct: 195 VAKQYLHNPVTCKVESQE-NKPAITQLGYNV-LPHTRTQALKAVLTEYQPKNAIVFCNRK 252
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+V+ + + + F+ + GDM+ F S +VL+ TD+
Sbjct: 253 TQVNDVVDELIEDGFSAKGLQGDMEQHQRTSVLMQFASDSLQVLVATDV 301
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/76 (46%), Positives = 46/76 (60%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+R L+ G VVVGTPGR+ D I L+ + ++ VLDEADEML GF D + V L
Sbjct: 118 LRALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELP 177
Query: 202 ADVQVILLSATMPDDV 249
+ Q L SATMP+ +
Sbjct: 178 ENHQTALFSATMPEPI 193
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+R L GV V+V TPGR+ D++ L +++ VLDEAD ML GF + I + L
Sbjct: 133 VRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLP 192
Query: 202 ADVQVILLSATMPDDVLEYLDAL 270
Q + SATMP D+ E D++
Sbjct: 193 IKRQTLFFSATMPKDIAELADSM 215
Score = 41.9 bits (94), Expect = 0.014
Identities = 27/104 (25%), Positives = 46/104 (44%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+RDP R+ V T E I Q + ++ K L L I +A++F T+ D
Sbjct: 216 LRDPARVAVTPVSSTAERINQRILQVDFSA-KPAFLTKLLKDEPINRALVFTRTKHGADK 274
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ +++ SA+HG+ + + F G R L+ TD+
Sbjct: 275 VVKTLEKAGIAASAIHGNKSQNHRERTLAQFRSGDIRTLVATDI 318
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ + + LE GV +VVGTPGR+ D + L + ++ VLDEAD ML GF D + +
Sbjct: 128 LEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEII 187
Query: 190 KMLSADVQVILLSATMPDDVLE 255
K + + L SATMP ++++
Sbjct: 188 KRTGENKRTFLFSATMPKEIVD 209
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/111 (27%), Positives = 57/111 (51%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+ ++R FM++ + + K+ELT E +Q Y ++ E+ KL LC + D ++FC
Sbjct: 208 VDIARKFMKEYIHVSTVKDELTTENAEQLYFEVD-EKDKLPLLCRIIDMNPDFYGIVFCQ 266
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
T+ +VD +++ + + +HGD + F R+L+TTD+
Sbjct: 267 TKLEVDEISKKLLDLGYNADGLHGDYSQYQRERVLDKFRKKQLRILVTTDV 317
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/73 (49%), Positives = 43/73 (58%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L GVHVVVGTPGRV D + +L + IK VLDEADEML GF D + + +
Sbjct: 123 LRRGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESR 182
Query: 211 QVILLSATMPDDV 249
Q L SATMP +
Sbjct: 183 QTALFSATMPSAI 195
Score = 40.3 bits (90), Expect = 0.043
Identities = 25/109 (22%), Positives = 52/109 (47%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ ++RDP I V + T + I+Q Y + + KL+ L + + + +IF T+
Sbjct: 198 IATTYLRDPDLITVAAKTGTADNIRQRYWLVSGMQ-KLDALTRILEAENFDGMIIFARTK 256
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ L + R F+ +A++GD+ + + G +L+ TD+
Sbjct: 257 LGTEELASKLQARGFSAAAINGDIQQQQRERTIQQLKDGKIDILVATDV 305
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L GVH VVGTPGRV D I ++L + ++ VLDE DEMLS GF + I + + +
Sbjct: 275 LARGVHAVVGTPGRVLDHIRRKSLDLSKVRTVVLDECDEMLSMGFLEDIRAILRACPKER 334
Query: 211 QVILLSATMPDDV 249
Q L SAT+P D+
Sbjct: 335 QTCLFSATVPRDI 347
Score = 34.7 bits (76), Expect = 2.1
Identities = 24/109 (22%), Positives = 48/109 (44%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++R MR+P I++ +++ I + + K L D+ A A++FCNTR
Sbjct: 350 IARRDMREPEHIVLSGDDIAAAEIYHGFYSTG-GSIKTRDLVDMIIVEDPAAAMVFCNTR 408
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + + ++ A+ D+ + + G F R L+ TD+
Sbjct: 409 EETRLVASVLQKNGYSAHALSSDLTQAAREHVMGLFRDRKLRFLVATDV 457
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++R+ ++ L G H+VV TPGR+ D I R++ I VLDEADEML GF D + +
Sbjct: 117 DMRQQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTI 176
Query: 187 FKMLSADVQVILLSATMPDDV 249
+ +V L SATMP V
Sbjct: 177 LAKTPKERKVALFSATMPKRV 197
Score = 33.9 bits (74), Expect = 3.7
Identities = 27/104 (25%), Positives = 41/104 (39%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+ +P I V T E I+Q Y + KLE L L ++F TR
Sbjct: 205 LSNPAEISVAAAATTNENIEQCYWLAKGAS-KLEALKRLLAFEDTEGVIVFTRTRESTTV 263
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ E + S ++GDMD + G+ VL+ TD+
Sbjct: 264 IAEQLRQTGLKASPLNGDMDQKMRLRTVSDLKSGALDVLVATDV 307
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/77 (42%), Positives = 50/77 (64%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ + +RQL+ GV V VGTPGRV D++ AL+ + ++ VLDEAD+ML GF + + +
Sbjct: 216 IGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIIL 275
Query: 190 KMLSADVQVILLSATMP 240
+ L Q ++ SATMP
Sbjct: 276 EKLPEKRQSMMFSATMP 292
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I+ L+ GV VV+GTPGR+ D + + L + + +LDEADEML GF D I + + +
Sbjct: 117 IKALKQGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVK 176
Query: 202 ADVQVILLSATMP 240
+ Q +L SATMP
Sbjct: 177 NERQTLLFSATMP 189
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/109 (33%), Positives = 57/109 (52%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+SR +M DP + + + E+T I QFY + LE KL++LC + D+ I ++FC T+
Sbjct: 195 LSRKYMNDPQTVSINRREVTAPSIDQFYYKV-LERNKLDSLCRIIDSEQIDLGILFCRTK 253
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ V LTE++ R + +HGD+ F S LI TD+
Sbjct: 254 KGVAELTEALQARGYIADGLHGDLTQSQRDAVMRKFRDSSIEFLIATDV 302
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/82 (40%), Positives = 50/82 (60%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ +R L+ G ++V TPGR+ D+I RAL +++FVLDEAD+ML GF + +
Sbjct: 119 IGRQMRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRID 178
Query: 190 KMLSADVQVILLSATMPDDVLE 255
K+L + Q + SATMP + E
Sbjct: 179 KLLPKNRQTLFFSATMPKTIQE 200
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/109 (23%), Positives = 52/109 (47%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+S F+ DPV + V + T E ++QF I + E + L +T + +A++F T+
Sbjct: 201 LSSQFLSDPVTVSVAPQSSTAERVEQFGIFVNQSEKQALLTITLKNTPGLDRALVFTRTK 260
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
D + + +A+HG+ + + +F G ++L+ TD+
Sbjct: 261 HGADRVVRHLEAAGLPAAAIHGNKSQPQRERALNAFRNGRLKILVATDI 309
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
+ L G+ +VV TP R+YD++ RA+ +I+ FV+DE D ML GFK Q+ + ++L
Sbjct: 123 QDLMQGLDIVVATPRRLYDLVLRRAVQLKSIQKFVIDEVDVMLDLGFKFQVNNIIELLPK 182
Query: 205 DVQVILLSATMPDDVLEYLD 264
+ Q I+ SATM + V E +D
Sbjct: 183 NRQSIMFSATMTETVEEMID 202
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 70.5 bits (165), Expect = 4e-11
Identities = 36/76 (47%), Positives = 47/76 (61%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
RE L G VV+GTPGR+ D + + L + +K VLDEADEML+ GF D + + K
Sbjct: 203 REQEMGLRGGCDVVIGTPGRMKDHLERKTLMMDKLKFRVLDEADEMLNMGFVDDVELILK 262
Query: 193 MLSADVQVILLSATMP 240
S DVQ +L SAT+P
Sbjct: 263 S-SGDVQTLLFSATLP 277
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 70.1 bits (164), Expect = 5e-11
Identities = 29/70 (41%), Positives = 51/70 (72%)
Frame = +1
Query: 40 GVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVI 219
GV +++ TPGR+ D++ +A++ + +++ VLDEAD+ML+ GFK+++ +FK+L Q +
Sbjct: 132 GVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKRQNL 191
Query: 220 LLSATMPDDV 249
L SAT+ DV
Sbjct: 192 LFSATLGKDV 201
Score = 40.7 bits (91), Expect = 0.033
Identities = 27/110 (24%), Positives = 52/110 (47%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ + DPV+I + EE ++ I+Q A+E + K L L + Q +IF ++
Sbjct: 204 ITEFLLHDPVKIEIIAEEQNIDLIQQIAYAVE-DARKGPLLRYLIKEQKMNQVLIFTSSV 262
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
+ D + E + + +A+H + + F G+ VL+ TDL+
Sbjct: 263 HRADAVVEKLKANNILAAALHSKKSQGARTEALKQFKAGNIHVLVATDLM 312
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 70.1 bits (164), Expect = 5e-11
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
++E ++ GVH+VV TPGR+ D++ R + + + VLDEAD M+ GF++ + +F
Sbjct: 169 IKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMIDMGFEEDVRTIF 228
Query: 190 KMLSADVQVILLSATMPDDVLEY 258
+ Q +L SATMP + +
Sbjct: 229 SYFKSQRQTLLFSATMPKKIQNF 251
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 70.1 bits (164), Expect = 5e-11
Identities = 28/84 (33%), Positives = 53/84 (63%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++ ++ + +GVH+V+GTPGR+ DM+ + ++ + + VLDEAD ML + F+ +I +
Sbjct: 238 DMSSQLQSIRNGVHIVIGTPGRISDMVNKKKINMDLCRFIVLDEADRMLDQVFELEIRNI 297
Query: 187 FKMLSADVQVILLSATMPDDVLEY 258
+ + Q +L SAT+P + E+
Sbjct: 298 LEHFTGPRQTMLFSATLPKKIQEF 321
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++R + ++ GVH+VV TPGR+ D++ + ++ + + LDEAD ++ GF+D I V
Sbjct: 303 DMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREV 362
Query: 187 FKMLSADVQVILLSATMPDDVLEY 258
F A Q +L SATMP + +
Sbjct: 363 FDHFKAQRQTLLFSATMPKKIQNF 386
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 69.7 bits (163), Expect = 6e-11
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Frame = +1
Query: 25 RQLESGVH---VVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
+QL+S VH +VVGTPGR+ D + ++L +++K+ VLDEAD ML GF D I V
Sbjct: 115 QQLDSLVHAPHIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLDMGFTDAIDDVISY 174
Query: 196 LSADVQVILLSATMPDDV 249
+D Q +L SAT P ++
Sbjct: 175 TPSDRQTLLFSATYPQEI 192
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQK--EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+S R P R + EE +E ++FY + + +L L + A V+FCN
Sbjct: 195 ISARVQRQPQRFEIADDVEESAIE--QRFYETTK--DQRLPLLIAILSHYQPASCVVFCN 250
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
T+R + E++ +R +VSA+HGD++ F S RVL+ TD+
Sbjct: 251 TKRDCQSVFEALEMRGISVSALHGDLEQRDRDQVLVRFSNRSCRVLVATDV 301
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
+QLE G VVVGTPGR+ D + ++L + +++ VLDEADEML+ GF + I + +
Sbjct: 129 QQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPK 188
Query: 205 DVQVILLSATMP 240
Q+ L SATMP
Sbjct: 189 TAQMCLFSATMP 200
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 69.7 bits (163), Expect = 6e-11
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R + + LE G H+VVGTPGR+ D I AL + +K VLDEADEML GF++ + +
Sbjct: 115 RAERKALERGCHIVVGTPGRLRDHIERGALDMSQLKAVVLDEADEMLDFGFREDLEYILD 174
Query: 193 MLSADVQVILLSATMP 240
A + +L SAT+P
Sbjct: 175 AAPASRRTLLFSATVP 190
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++ + L+ H+V+ TPGR+ D+I A+ + +K +LDEADEMLS GFK + +
Sbjct: 112 KIDRQMNNLKRTTHIVIATPGRLIDLIERGAVDISHVKTVILDEADEMLSMGFKQDLNRI 171
Query: 187 FKMLS-ADVQVILLSATMPDDV 249
K + +D + L SATMPD++
Sbjct: 172 LKFTTKSDRKTWLFSATMPDEI 193
Score = 33.1 bits (72), Expect = 6.5
Identities = 24/99 (24%), Positives = 43/99 (43%)
Frame = +3
Query: 285 RILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 464
RI + K L I+ + L+E K+ + + + +IFC T+ L + +
Sbjct: 207 RIEINKNTLVNANIRHQFAKTTLKE-KVADIVTFLEKRQAQRGIIFCRTKAGAQNLAKQL 265
Query: 465 HLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
F+ +A+ GDM +F S + LI+TD+
Sbjct: 266 VDEGFSAAALEGDMQQKERDKVMRAFKNESLQYLISTDV 304
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD 207
+L GV +VVGTPGR+ D++ RAL + I+ VLDEAD+ML+ GF++ + + A
Sbjct: 145 KLRRGVDIVVGTPGRIMDLMNRRALDLSEIEFVVLDEADQMLNVGFEEDVEAILHDCPAG 204
Query: 208 VQVILLSATMP 240
Q L SATMP
Sbjct: 205 RQTFLFSATMP 215
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 69.7 bits (163), Expect = 6e-11
Identities = 30/81 (37%), Positives = 48/81 (59%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++R + ++ GVH+VV TPGR+ DM+ + + + + LDEAD ++ GF+D I V
Sbjct: 267 DMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREV 326
Query: 187 FKMLSADVQVILLSATMPDDV 249
F + Q +L SATMP +
Sbjct: 327 FDHFKSQRQTLLFSATMPTKI 347
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 414 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+IFC + VD + E + L+ A+HG D + + SF G VL+ TD+
Sbjct: 401 LIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDV 456
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 69.7 bits (163), Expect = 6e-11
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +1
Query: 46 HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVILL 225
++VVGTPGR+ D I L+ +K F+LDEADEML+ GF + + + D +++L
Sbjct: 125 NIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLF 184
Query: 226 SATMPDDVL 252
SATMP ++L
Sbjct: 185 SATMPREIL 193
Score = 37.1 bits (82), Expect = 0.40
Identities = 24/87 (27%), Positives = 38/87 (43%)
Frame = +3
Query: 324 IKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGD 503
I+Q Y+ + E + E LC L ++FC T+R L + F A+HGD
Sbjct: 214 IEQSYVEVNENE-RFEALCRLLKNKEF-YGLVFCKTKRDTKELASMLRDIGFKAGAIHGD 271
Query: 504 MDNVSVK*S*GSFVLGSSRVLITTDLL 584
+ + F R+LI TD++
Sbjct: 272 LSQSQREKVIRLFKQKKIRILIATDVM 298
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 69.3 bits (162), Expect = 8e-11
Identities = 30/80 (37%), Positives = 49/80 (61%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ IR L+ GVH++V TPGR+ D++ + + +T+ V+DEADEML+ GF D I +
Sbjct: 112 IDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDSINAIL 171
Query: 190 KMLSADVQVILLSATMPDDV 249
+ + +L SATM ++
Sbjct: 172 ADVPKERNTLLFSATMSPEI 191
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/109 (15%), Positives = 50/109 (45%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+S+ ++++ I + ++ + +K ++ ++ K L + D +IFC TR
Sbjct: 194 ISKNYLQNAKEITIGRKNESTSNVKHVAYTVQAKD-KYAALKRIVDYYPQIYGIIFCRTR 252
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
++ + + + + ++HG++ F + + ++L+ TD+
Sbjct: 253 KETQEIADKLMQEGYNADSLHGELSQAQRDAVMQKFRIRNLQLLVATDV 301
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 69.3 bits (162), Expect = 8e-11
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++R++ R LE G H+VV TPGR+ D IT ++ + + VLDEADEML GF++ + +
Sbjct: 115 DMRDERRALERGAHIVVATPGRLRDHITRGSIDLSGVAAVVLDEADEMLDLGFREDLEFI 174
Query: 187 FKMLSADVQVILLSATM 237
+ D Q +L SAT+
Sbjct: 175 LEETPEDRQTLLFSATV 191
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 69.3 bits (162), Expect = 8e-11
Identities = 31/81 (38%), Positives = 51/81 (62%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
+ R + + LE G H+VVGTPGR+ D + L+ + ++ VLDEADEML GF+D++ +
Sbjct: 156 DARREAQALERGCHIVVGTPGRLCDHLGRGRLNLSRLRAVVLDEADEMLDLGFRDELEEI 215
Query: 187 FKMLSADVQVILLSATMPDDV 249
A+ + +L SAT+ ++
Sbjct: 216 LDATPAERRTLLFSATIAREI 236
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 69.3 bits (162), Expect = 8e-11
Identities = 35/86 (40%), Positives = 47/86 (54%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++R +R L+ V+VGTPGRV D + L + +K VLDEADEML GF + I +
Sbjct: 113 DMRNQLRALKQNPQVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWI 172
Query: 187 FKMLSADVQVILLSATMPDDVLEYLD 264
+ D Q L SATMP + D
Sbjct: 173 LEHTPKDKQTALFSATMPHQIKRITD 198
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/74 (47%), Positives = 44/74 (59%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L G VVVGTPGR+ D+I +L + +K VLDEADEMLS GF D I + D
Sbjct: 170 LRRGARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDR 229
Query: 211 QVILLSATMPDDVL 252
Q +L SAT+ V+
Sbjct: 230 QTMLFSATLSSRVM 243
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
++ L+ G +VVGTPGR+ D++ L + +K+ VLDEADEML+ GF + I + K +
Sbjct: 121 VKALKQGTAIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVP 180
Query: 202 ADVQVILLSATMPDDV 249
Q L SATMP+ +
Sbjct: 181 NTAQRALFSATMPNAI 196
Score = 33.9 bits (74), Expect = 3.7
Identities = 23/110 (20%), Positives = 50/110 (45%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ F++DP+ I ++ IKQ ++ K+ L L + +A+IF TR
Sbjct: 199 LAKTFLKDPLNIQIEAIAREKATIKQKAWKVQ-GMTKMTALTRLLEVTPYQRALIFVRTR 257
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
+ + E + F + + GD++ + + G +L+ TD++
Sbjct: 258 QDTMDVAELLQRNGFKAAPLSGDLNQAQREQTVSQLRSGHIEILVGTDVV 307
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
LE G ++VGTPGRV+D I L + VLDEADEML++GF +++ + L
Sbjct: 144 LEEGTPIIVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKTR 203
Query: 211 QVILLSATMPDDV 249
QV+L SAT+P D+
Sbjct: 204 QVLLFSATVPTDI 216
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/83 (38%), Positives = 52/83 (62%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+ +L+ GV ++V TPGR+ D+ + + +++FVLDEAD ML GF + V K+L
Sbjct: 116 VDKLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLP 175
Query: 202 ADVQVILLSATMPDDVLEYLDAL 270
A Q + SATMP +V++ ++ L
Sbjct: 176 AVKQTLFFSATMPPEVMDLVNGL 198
Score = 38.7 bits (86), Expect = 0.13
Identities = 23/104 (22%), Positives = 48/104 (46%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+++PV++ V +E I Q ++ K + L L + L + A++F T+ +
Sbjct: 199 LKNPVKVAVDPVSSPVEIIDQSVYLVDKGN-KTKLLAWLVEGLDVKNAIVFTRTKHGANK 257
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + T +A+HG+ + + + F G R L+ TD+
Sbjct: 258 VAGDLVKAGITAAAIHGNKSQTARQQALADFKAGKVRCLVATDI 301
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L GV VVVGTPGR+ D+I R+L ++ VLDEAD+ML+ GF++ + + + L
Sbjct: 225 LTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKR 284
Query: 211 QVILLSATMP 240
Q +L SATMP
Sbjct: 285 QSMLFSATMP 294
Score = 35.5 bits (78), Expect = 1.2
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Frame = +3
Query: 255 VSRCFMRDPVRI-LV-QKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFC 425
++R ++ +P+ I LV ++E EGIK + IA K L DL + + ++F
Sbjct: 300 LARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTS-KRTILSDLITVYAKGGKTIVFT 358
Query: 426 NTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
T+R D ++ ++ A+HGD+ + + +F G VL+ TD+
Sbjct: 359 QTKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDV 409
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD 207
+L+ H+VVGTPGRV D I L + + V+DEADEML+ GF +Q+ + K L +
Sbjct: 116 ELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTE 175
Query: 208 VQVILLSATMPDDV 249
+L SAT+P D+
Sbjct: 176 RTTMLFSATLPQDI 189
Score = 46.0 bits (104), Expect = 9e-04
Identities = 32/109 (29%), Positives = 50/109 (45%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+SR +M++P I V+ LT I+ I + EE K L D+ T + +IFC T+
Sbjct: 192 LSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVR-EENKFSLLKDVLMTENPDSCIIFCRTK 250
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
V+ LT+ + + +HG M F G R L+ TD+
Sbjct: 251 EHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDV 299
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD 207
+L+ GV V+V TPGR+ D I R + + ++ +LDEADEMLS GF D + + + L+
Sbjct: 129 KLKHGVQVLVATPGRLIDFIYSRQIDLSHVETLILDEADEMLSMGFYDDLVFIIQCLNHS 188
Query: 208 VQVILLSATMP 240
Q +L SATMP
Sbjct: 189 HQTLLFSATMP 199
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L SG+ ++V TPGR+ D+I+ + +++ FVLDEAD ML GF I + K+L A
Sbjct: 118 LRSGIQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARR 177
Query: 211 QVILLSATMPDDV 249
Q + SATMP ++
Sbjct: 178 QTLFFSATMPPEI 190
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/79 (41%), Positives = 45/79 (56%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R LE G HV+VGTPGRV D + R + + + VLDEAD ML GF+D + + K
Sbjct: 131 RIQTNSLEHGAHVLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLEMGFQDSLNAIVK 190
Query: 193 MLSADVQVILLSATMPDDV 249
+ Q +L SAT P ++
Sbjct: 191 HIPKTRQTLLFSATYPKNI 209
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/86 (27%), Positives = 46/86 (53%)
Frame = +3
Query: 324 IKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGD 503
I+Q + A+ E+ + + +L ++FCNT+ +V + ++ F+V A+HG+
Sbjct: 234 IEQLFYAMNNED-SAQLVMNLLGDHQPENCLVFCNTKNEVKDIFNTLRANKFSVLALHGE 292
Query: 504 MDNVSVK*S*GSFVLGSSRVLITTDL 581
++ + F GS+RVLI TD+
Sbjct: 293 LEQKDRDQAIIQFSNGSARVLIATDV 318
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ I QL+ GV V++ TPGR+ D+ RALH +++ V DEAD ML GF D + +
Sbjct: 113 IEPQIAQLQEGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQ 172
Query: 190 KMLSADVQVILLSATMPDDVLEY 258
+L Q +L SAT + +
Sbjct: 173 SLLPVKRQTLLFSATFSKQIKHF 195
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 68.5 bits (160), Expect = 1e-10
Identities = 28/81 (34%), Positives = 53/81 (65%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++ E I++LE+ H++V TPGR+ D+I +A++ + +K +LDEADEML+ GF I +
Sbjct: 110 KIEEQIKKLETPKHILVATPGRLLDLIARKAVNLSNLKYLILDEADEMLNMGFLPDIDKI 169
Query: 187 FKMLSADVQVILLSATMPDDV 249
K+ + +L ++T+ ++
Sbjct: 170 MKIAKPTARKLLFTSTLGSEL 190
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
++ L +GV VVV TPGR+ D + ++ H N +++FVLDEAD+ML GF I + L
Sbjct: 182 MKALAAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLP 241
Query: 202 ADVQVILLSATMPDDV 249
+ Q + SATMP ++
Sbjct: 242 KERQNLFFSATMPSEI 257
Score = 46.0 bits (104), Expect = 9e-04
Identities = 26/104 (25%), Positives = 51/104 (49%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+++P ++ + T+E I Q I IE + K L +L S+ ++++F T+R D
Sbjct: 265 LKNPAQVAITPSATTVERIDQSLIFIEAQR-KRPLLAELLADKSVERSIVFTRTKRGADR 323
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + + +A+HGD + + +F G + LI TD+
Sbjct: 324 VAKYLVASGIEAAAIHGDKTQGQRERALAAFKAGQVKALIATDI 367
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+R+ +R L GV ++V TPGR+ D++ + L + K VLDEAD+ML GF + +
Sbjct: 216 IRKQMRDLSKGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRII 275
Query: 190 KMLSADVQVILLSATMPDDV 249
++ D Q +L SATM ++
Sbjct: 276 SKVNKDRQTLLFSATMSKEI 295
Score = 35.9 bits (79), Expect = 0.93
Identities = 23/109 (21%), Positives = 51/109 (46%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ ++ DPV++ V E T++ I+Q + + + L L + + ++F T+
Sbjct: 298 LTETYLTDPVQVSVTPENSTVDKIEQSLMHLSKQNKGL-ALQRIISANPKKRVIVFSRTK 356
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
D L + + ++ A+HG+ + + F G + +LI TD+
Sbjct: 357 HGSDKLVKWLGTQNIGADAIHGNKSQGQRQRALDDFKKGKTYILIATDI 405
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 68.5 bits (160), Expect = 1e-10
Identities = 28/84 (33%), Positives = 50/84 (59%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R +R + G ++VV TPGR+YD ++ ++ T+++ +LDE+D ML GF I +
Sbjct: 113 RSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIA 172
Query: 193 MLSADVQVILLSATMPDDVLEYLD 264
+ A+ Q +L SAT+ V + ++
Sbjct: 173 AMPAERQTLLFSATLESSVKQLVE 196
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 68.5 bits (160), Expect = 1e-10
Identities = 34/85 (40%), Positives = 51/85 (60%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+R+DI +L+ VH++VGTPGR+ D+ + N +FV+DEAD++LS F I
Sbjct: 145 LRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQTL 204
Query: 190 KMLSADVQVILLSATMPDDVLEYLD 264
+ + QV+L SAT P V E+ D
Sbjct: 205 ALCPQERQVMLFSATFPWTVKEFKD 229
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/94 (31%), Positives = 49/94 (52%)
Frame = +3
Query: 303 EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 482
+ELTL+G+ Q+Y +E E K+ L L+ L I Q++IFCN+ +V+ L + + ++
Sbjct: 242 DELTLKGVTQYYAYVE-ESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKVTELGYS 300
Query: 483 VSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
H M F G +R L+ +DLL
Sbjct: 301 CFYSHAKMQQAHRNRVFHDFRNGMTRNLVCSDLL 334
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 68.1 bits (159), Expect = 2e-10
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+R+L++G ++V TPGR+ + ++ + N + FV+DEAD ML GF+ QI + +
Sbjct: 435 VRELQNGAEIMVATPGRLLEFLSNGTIKLNRVSYFVMDEADRMLDMGFEPQIRKIVGQIR 494
Query: 202 ADVQVILLSATMPDDV 249
D Q ++ SAT P ++
Sbjct: 495 PDRQTLMFSATWPSEI 510
>UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 744
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
+VRE Q+ GV +VVGTPGR+ D AL ++I VLDEAD+ML+ GF++ I +
Sbjct: 184 DVREQANQIRDGVEIVVGTPGRIIDQYERGALMFHSIIATVLDEADQMLNFGFQEDIEKI 243
Query: 187 FKMLSAD-----VQVILLSATMP 240
F + D Q +L SATMP
Sbjct: 244 FGFIKNDKGEERPQNLLFSATMP 266
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
E +R+L+ G H++V TPGR+ DMIT + I+ VLDEAD ML GF+ QI + +
Sbjct: 420 EQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQ 479
Query: 196 L----SADVQVILLSATMPDDVLE 255
L + Q ++ SAT P + E
Sbjct: 480 LNMPPTGQRQTLMFSATFPKQIQE 503
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/105 (33%), Positives = 55/105 (52%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
FM+ P IL++ E T+ I+Q+Y + K+ETLC + D ++IFC T+R D
Sbjct: 197 FMKQPEIILIESPERTVPEIEQYYYQVNSRR-KIETLCRIIDAQQPPISLIFCRTKRNAD 255
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L + R + A+HGDM F G++++L+ TDL
Sbjct: 256 ELARVLTSRGYNADALHGDMSQRERDHVMHGFRQGNTKILVATDL 300
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/78 (39%), Positives = 43/78 (55%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+R L ++VGTPGR+ D + + + +K VLDEADEML GF I +
Sbjct: 115 LRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCP 174
Query: 202 ADVQVILLSATMPDDVLE 255
+ Q L SAT+PD+V E
Sbjct: 175 RERQTFLFSATLPDEVRE 192
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ IR L+ V +VVGTPGR+ D + L IK V+DEADEML GF + + +
Sbjct: 111 IGNQIRALKRRVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMIL 170
Query: 190 KMLSADVQVILLSATMPDDVL 252
+ + Q+++ SATMP ++
Sbjct: 171 SKTNKEKQILMFSATMPQRIV 191
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 67.7 bits (158), Expect = 2e-10
Identities = 36/105 (34%), Positives = 58/105 (55%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
F+ P ++ +ELTL+ IKQFYI ++ E K L D+Y S+ Q +IFC +R+
Sbjct: 247 FVPQPNEFSIKPQELTLKNIKQFYIQMKSSEDKYPKLIDIYGMKSMGQCIIFCESRKMAC 306
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+L +++ S + G++D + + F G SRVLI T+L
Sbjct: 307 YLQKALERDSHLSSLLTGELDVLERQRQIDDFRNGKSRVLIATNL 351
Score = 38.3 bits (85), Expect = 0.17
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Frame = +1
Query: 19 DIRQLESGVHVVVGTPGRVYDMITXRA-LHANT--IKLFVLDEADEML-SRGFKDQIXXV 186
DI + + +++GTPG + T + L+ N +K+FVLDEAD ++ + F + +
Sbjct: 160 DILEGQINSQIIIGTPGTLKFWTTDNSSLYFNPKKLKVFVLDEADILIETPEFLNIAKRI 219
Query: 187 FKMLSADVQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQL 348
++ + Q++L SAT + V+++ + + + L K + F +Q+
Sbjct: 220 KSKVTNNCQILLFSATYDERVMDFAHDFVPQPNEFSIKPQELTLKNIKQFYIQM 273
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/83 (34%), Positives = 46/83 (55%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
V E + + GVH+VV TPGR+ DM+ + L + + +DEAD M+ GF++ + +F
Sbjct: 299 VSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIF 358
Query: 190 KMLSADVQVILLSATMPDDVLEY 258
Q +L SATMP + +
Sbjct: 359 SFFKGQRQTLLFSATMPKKIQNF 381
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R + R+L +G H+VVGTPGR+ D + L + +K VLDEADEML+ GF++ + + +
Sbjct: 114 RREQRELAAGAHIVVGTPGRLCDHLRRGRLDISELKAVVLDEADEMLNLGFREDMEFILE 173
Query: 193 MLSADVQVILLSATMPDDVL 252
+ +L SAT P ++
Sbjct: 174 TTPETRRTLLFSATFPRGIV 193
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/87 (35%), Positives = 52/87 (59%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ I L++GV ++V TPGR+ D++ +A++ + ++ VLDEAD ML GF I V
Sbjct: 121 IEPQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVM 180
Query: 190 KMLSADVQVILLSATMPDDVLEYLDAL 270
+LS Q ++ SAT ++ + D+L
Sbjct: 181 ALLSPQRQSLMFSATFSGEIRKLADSL 207
Score = 36.7 bits (81), Expect = 0.53
Identities = 24/104 (23%), Positives = 45/104 (43%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
++ PVRI + E I ++ + K L L ++ QA+IF T+
Sbjct: 208 LKQPVRIEAAVQNTVNESISHVIHWVKPDS-KFALLLHLIRQQNLKQALIFVKTKHGASH 266
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L + + + + A+HGD + + F G ++L+ TD+
Sbjct: 267 LAQMLSRHEISAVAIHGDRNQQQRTQALAEFKHGDVQILVATDV 310
>UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein;
n=10; Alphaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9)
Length = 793
Score = 67.3 bits (157), Expect = 3e-10
Identities = 30/81 (37%), Positives = 50/81 (61%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
+ R + R L+ G H+VVGTPGR+ D I +L + ++ VLDEADEML GF++ + +
Sbjct: 128 DYRTERRALDRGAHIVVGTPGRLRDHIERGSLDLSGLRAVVLDEADEMLDLGFREDLEFI 187
Query: 187 FKMLSADVQVILLSATMPDDV 249
+ + ++ SAT+P ++
Sbjct: 188 LGSAPEERRTLMFSATVPKEI 208
Score = 35.5 bits (78), Expect = 1.2
Identities = 27/105 (25%), Positives = 45/105 (42%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
F +D VRI E I+ + + + K + ++ A++FC TR V+
Sbjct: 215 FQQDAVRIQTAGERKQHADIEYRALTVSARD-KEHAIFNVLRFYEAPSAIVFCKTRLAVN 273
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L M R F V A+ G++ + + G +RV I TD+
Sbjct: 274 HLLARMGNRGFQVVALSGELSQQERTHALQALRDGRARVCIATDV 318
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ I++L GV V+V TPGR+ D+ +A+ N +++ VLDEAD ML GF I +
Sbjct: 113 INPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKIL 172
Query: 190 KMLSADVQVILLSATMPDDVLEYLDAL 270
ML A Q ++ SAT D++ E L
Sbjct: 173 AMLPAKRQNLMFSATFSDEIRELAKGL 199
Score = 37.5 bits (83), Expect = 0.30
Identities = 24/109 (22%), Positives = 48/109 (44%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ + PV I V +KQ+ ++ + K L L Q ++F T+
Sbjct: 195 LAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQ-KSALLIQLIKQEDWQQVLVFSRTK 253
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ L +S+ + + +A+HG+ + + F G RVL+ TD+
Sbjct: 254 HGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDI 302
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/106 (31%), Positives = 60/106 (56%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
F + +I ++KE++T++ I+Q Y+ + E+ K E L LYD L I Q+++FC + D
Sbjct: 343 FAPEANKIFLRKEDITVDAIRQLYLECDSEDQKYEALSALYDCLVIGQSIVFCKRKVTAD 402
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
+ E + V+++HGD + F G ++VLITT+++
Sbjct: 403 HIAERLISEGHAVASLHGDKLSQERDAILDGFRNGETKVLITTNVI 448
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = +1
Query: 49 VVVGTPGRVYDMITX--RALHANTIKLFVLDEADEMLSR-GFKDQIXXVFKMLSADVQVI 219
+++GTPG + DM+ R L I++ VLDEADE++++ G +Q + ++L +VQ +
Sbjct: 267 ILIGTPGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGLGEQTFRIKQLLPPNVQNV 326
Query: 220 LLSATMPDDVLEYLD 264
L SAT DDV E+ D
Sbjct: 327 LFSATFNDDVQEFAD 341
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +1
Query: 46 HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVILL 225
HVVVGTPGR+ ++ RALH ++ VLDEAD ML GF++ I + Q +L
Sbjct: 148 HVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQSLLF 207
Query: 226 SATMPD 243
SAT PD
Sbjct: 208 SATFPD 213
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEE-WKLETLCDLYDTLSIAQAVIFCNT 431
++R ++DP+ I V+ + E +QF+ E++ ++ + + L + +V+FCNT
Sbjct: 218 LAREILKDPIEITVEGADNAPEIDQQFF---EVDPTYRQKAVAGLLLRFTPESSVVFCNT 274
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R++VD + S+ F+ A+HGDM+ FV S VL+ +D+
Sbjct: 275 RKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV 324
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ IR + G ++V TPGR+ D++ R + + +K VLDEADEML+ GFK+ I +
Sbjct: 123 IMNQIRDIRRGAQIIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNMGFKEDIDFIL 182
Query: 190 KMLSADVQVILLSATMPDDVLEYLD 264
+ L SATM ++ +D
Sbjct: 183 SKSDTGRNIWLFSATMAREIKRIVD 207
Score = 37.9 bits (84), Expect = 0.23
Identities = 23/105 (21%), Positives = 47/105 (44%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
+M P + + + + + I+ I ++ + K+E L D V+FC T+R
Sbjct: 209 YMVQPEEVRINPKNIVNKNIEHQSIQLKASD-KIEALRRFLDYDEDMFGVVFCRTKRDTQ 267
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + ++ + A+HGDM + F + ++LI TD+
Sbjct: 268 NVADQLNNNGYATEALHGDMSQAQRDAAMKRFRNKNLKLLIATDV 312
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 66.9 bits (156), Expect = 4e-10
Identities = 27/81 (33%), Positives = 49/81 (60%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
+V + +R+L+ +H+++GTPGR+ D + + ++ + + VLDEAD+ML GF + +
Sbjct: 110 DVEQQLRKLKGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDI 169
Query: 187 FKMLSADVQVILLSATMPDDV 249
+ Q + SATMP+ V
Sbjct: 170 MTHIPKRRQNMFFSATMPNQV 190
Score = 60.1 bits (139), Expect = 5e-08
Identities = 32/105 (30%), Positives = 56/105 (53%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
+M+DPV+I VQ + +TL+ I+Q I + K + LC L+D + A+IFC T+R+
Sbjct: 197 YMKDPVQIQVQSKRVTLDEIRQVVIETT-DRGKQDLLCQLFDEYNPFMAIIFCRTKRRAI 255
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L E++ + +HGD+ + +F + L+ TD+
Sbjct: 256 ALNEALINLGYNSDELHGDLTQAKREKVMKAFKKSKIQYLVATDV 300
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/77 (41%), Positives = 45/77 (58%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+ L+ GV +VVGTPGR+ D+ + L +K+ +LDEADEML GF + +
Sbjct: 159 VDSLQKGVEIVVGTPGRLIDLYKQKHLSLKNVKIVILDEADEMLDLGFLPDVETLIAGTP 218
Query: 202 ADVQVILLSATMPDDVL 252
A Q +L SATMP V+
Sbjct: 219 AVRQTLLFSATMPGPVI 235
Score = 37.9 bits (84), Expect = 0.23
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILV---QKEELTLEGIKQF-YIAIELEEWKLETLCDLYDTLSIAQAV 416
I ++R +M P I E LT I+Q Y A ++ K+E + + + +
Sbjct: 235 IAMARRYMTQPTHIRAADPDDEGLTKRDIRQLIYRAHSMD--KIEVVARILQARGRGRTI 292
Query: 417 IFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
IF T+R + E + R F +A+HGD+ + + + +F VL+ TD+
Sbjct: 293 IFTKTKRTAAKVAEELVDRGFAAAAIHGDLGQGAREQALRAFRNNKVDVLVATDV 347
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/76 (42%), Positives = 44/76 (57%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+R LE GV VV+ TPGR+ D + + VLDEAD ML GF+ QI + + +
Sbjct: 348 VRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 407
Query: 202 ADVQVILLSATMPDDV 249
D QV++ SAT P +V
Sbjct: 408 PDRQVLMWSATWPKEV 423
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ I+ L+ G +VVGTPGRV D + R L + I +LDEADEM++ GF D + +
Sbjct: 109 IERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIM 168
Query: 190 -KMLSADVQVILLSATMP 240
K+ + Q +L SATMP
Sbjct: 169 DKIPAVQRQTMLFSATMP 186
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAI-ELEEWKLETLCDLYDTLSIAQAVIFCNTRRKV 443
FM+ P I E++ I++FY + ELE K +T + D A++F T+R+V
Sbjct: 196 FMKSPKIIKTMNNEMSDPQIEEFYTIVKELE--KFDTFTNFLDVHQPELAIVFGRTKRRV 253
Query: 444 DWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
D LT ++ + + +HGD+ F +L+ TD+
Sbjct: 254 DELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDV 299
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
E ++L++G +VV TPGR+ DM+ +AL VLDEAD M GF+ Q+ +
Sbjct: 343 EQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQ 402
Query: 196 LSADVQVILLSATMP 240
+ D Q +L SATMP
Sbjct: 403 IRPDRQTLLFSATMP 417
Score = 48.8 bits (111), Expect = 1e-04
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCD-LYDTLSIAQAVIFCNT 431
++R + DP+R+ V + + E I Q I + KL L + L + ++F +
Sbjct: 423 LAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASK 482
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ VD + + L F V+A+HGD D S + F G VLI TD+
Sbjct: 483 KATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDV 532
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 66.5 bits (155), Expect = 6e-10
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
V E + + GVH++V TPGR+ DM+ + + + +DEAD M+ GF++ + +F
Sbjct: 301 VSESLDVISRGVHIMVATPGRLMDMLDKKMVKLGVCRYLCMDEADRMIDMGFEEDVRTIF 360
Query: 190 KMLSADVQVILLSATMPDDVLEY 258
Q +L SATMP + +
Sbjct: 361 SFFEGQRQTLLFSATMPKKIQNF 383
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +1
Query: 22 IRQLES--GVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
IRQ+E G +V+GTPGR+ D+ + L + +K VLDEAD ML GF D I +
Sbjct: 106 IRQVEELPGSDIVIGTPGRILDLYNQKYLKLDHVKYLVLDEADLMLDMGFIDDIKKIISF 165
Query: 196 LSADVQVILLSATMPDDV 249
Q ILLSAT+P +V
Sbjct: 166 TPEGRQTILLSATLPAEV 183
Score = 33.5 bits (73), Expect = 4.9
Identities = 26/109 (23%), Positives = 46/109 (42%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ FM +P + +E IK Y E + K TL + + +A++F T+
Sbjct: 186 IANHFMNNPEFVDAGGDEAIPSSIKHLYTVSEKFD-KFSTLMSYIHSYNSRKAIVFVKTQ 244
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R D L + F +HG M + + S F S +L+ T++
Sbjct: 245 RSGDLLNLILSRSGFNNVLIHGGMKQHARERSIADFRHIDSGILVATNV 293
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD 207
+L G VVV TPGR++D+I A+ + + VLDEADEML GF+D++ + +
Sbjct: 118 ELRKGAQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMGFQDELNAILAVTPDS 177
Query: 208 VQVILLSATMPDDV 249
+L SATMP +V
Sbjct: 178 KNTLLFSATMPREV 191
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/105 (22%), Positives = 47/105 (44%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
+M+DP+ I+V + E + Y + + + L + D A+IFC TR +
Sbjct: 198 YMKDPLEIIVGRRNAGAENVDHIYYVVSARH-RYQALRRIADMNPELYAIIFCRTRLETR 256
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + + ++ A+HGD+ F + R+L+ TD+
Sbjct: 257 EIVDKLIEDGYSADALHGDLSQSQRDHVMHKFRSRNIRMLVATDV 301
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++ + + L GV ++VGTPGRV DM + N+ K+ LDEAD ML GF I +
Sbjct: 111 DLEKQAKTLAKGVDIIVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFPDIMWI 170
Query: 187 FKMLSADVQVILLSATMPDDVLE 255
+ +++ Q +L SAT P ++++
Sbjct: 171 VERMTSRQQTLLFSATFPQEIID 193
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/73 (47%), Positives = 45/73 (61%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L GV VVVGTPGR+ D + L + I+ VLDEADEMLS GF D I + + A
Sbjct: 121 LRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFADAIETILQQTPAAR 180
Query: 211 QVILLSATMPDDV 249
Q +L SAT+ D++
Sbjct: 181 QTMLFSATLNDEI 193
Score = 46.0 bits (104), Expect = 9e-04
Identities = 26/109 (23%), Positives = 54/109 (49%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++R ++R+PV + + E + ++ +++ + L DL + +A++F T+
Sbjct: 196 LARKYLREPVVVDLVGEGKSQAAQSVEHLKVKVGRTRTRVLADLLTVYNPEKAIVFTRTK 255
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R+ D L + R A+HGD+ + + G+F G VL+ TD+
Sbjct: 256 READELANELIHRGIESEALHGDLAQSQRERALGAFRSGRVGVLVATDV 304
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/87 (36%), Positives = 49/87 (56%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ I++L GV V+V TPGR+ D++ + N +++ VLDEAD ML GF I +
Sbjct: 113 INPQIQKLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKIL 172
Query: 190 KMLSADVQVILLSATMPDDVLEYLDAL 270
+L A Q ++ SAT D++ E L
Sbjct: 173 ALLPAKRQNLMFSATFSDEIRELAKGL 199
Score = 37.5 bits (83), Expect = 0.30
Identities = 24/109 (22%), Positives = 48/109 (44%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ + PV I V +KQ+ ++ + K L L Q ++F T+
Sbjct: 195 LAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQ-KSALLIQLIKQEDWQQVLVFSRTK 253
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ L +S+ + + +A+HG+ + + F G RVL+ TD+
Sbjct: 254 HGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDI 302
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 66.5 bits (155), Expect = 6e-10
Identities = 34/73 (46%), Positives = 43/73 (58%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I L+ G VVVGTPGRV D+I AL + +++ VLDEADEML GF + + +
Sbjct: 158 IGALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSAP 217
Query: 202 ADVQVILLSATMP 240
D L SATMP
Sbjct: 218 DDRLTALFSATMP 230
Score = 35.1 bits (77), Expect = 1.6
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLS---------IA 407
V+R ++DPV++ V E T++ I Q Y + + K+ L + T +
Sbjct: 236 VAREHLKDPVKVAVSTESSTVDTIHQTYAVVPYKH-KIGALSRVLATRAQHIKEGQEEAD 294
Query: 408 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
A++F TR V+ ++ + R F + + GD+ + GS VL+ TD+
Sbjct: 295 AAIVFVRTRADVEEVSLELSSRGFRAAGISGDVAQTERERMVERLKNGSLDVLVATDV 352
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Frame = +1
Query: 4 HEVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXX 183
+ ++ +R LE G H++V TPGR+ DMI + + I+ VLDEAD ML GF+ QI
Sbjct: 421 NNTQDQMRDLERGCHLIVATPGRLEDMIGRGKVGLDNIRFLVLDEADRMLDMGFEPQIRR 480
Query: 184 VFK----MLSADVQVILLSATMPDDVLEYLDAL*EILYAYLY 297
+ + ++ + Q ++ SAT P + E + LY Y++
Sbjct: 481 IVEESRMPVTGERQTLMFSATFPKAIQELAS---DFLYRYIF 519
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/79 (39%), Positives = 46/79 (58%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R I + +GV +++ TPGR+ D++ + +TI +LDEAD ML GF+ QI V
Sbjct: 220 RAQINVVRNGVEILIATPGRLNDLVQEGVVDVSTITYLILDEADRMLDMGFEPQIRKVLL 279
Query: 193 MLSADVQVILLSATMPDDV 249
+ D Q ++ SAT PD V
Sbjct: 280 DVRPDRQTVMTSATWPDGV 298
Score = 38.7 bits (86), Expect = 0.13
Identities = 23/110 (20%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLY-DTLSIAQAVIFCNT 431
+++ +M DP+++ + +L I + EE K + + + D + +IFC
Sbjct: 301 LAQSYMHDPIQVYIGTLDLAATHTVTQVIEVMDEEDKFQRINEFVRDMQPTDKVIIFCGK 360
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + D L+ L + + A+HG+ + + + G+ ++LI TD+
Sbjct: 361 KTRADDLSSEFILSNISCQAIHGNREQSDREQALEDIKNGTVKILIATDV 410
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
R L +GVHV + TPGR+ D++ + + LDEAD ML GF+DQI + +
Sbjct: 264 RALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLTLDEADRMLDMGFEDQIRKICSQIRT 323
Query: 205 DVQVILLSATMPDDV 249
D Q ++ SAT P ++
Sbjct: 324 DRQTLMFSATWPREI 338
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 66.5 bits (155), Expect = 6e-10
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +1
Query: 34 ESGV--HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXVFKMLSA 204
E+GV +VVVGTPG V D+I R + +KL V+DEAD ML +G +Q V ML
Sbjct: 210 ETGVKANVVVGTPGTVMDLIRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCVRVKNMLPK 269
Query: 205 DVQVILLSATMPDDVLEYLD 264
+Q +L SAT PD V Y +
Sbjct: 270 TIQTLLFSATFPDHVKSYAE 289
Score = 62.9 bits (146), Expect = 7e-09
Identities = 35/97 (36%), Positives = 51/97 (52%)
Frame = +3
Query: 294 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLR 473
++++ELT++GI Q Y+ + K E LC LY ++I +VIF TR D + M
Sbjct: 300 LRQQELTVKGISQMYMDCPSLKEKYEVLCKLYGLMTIGSSVIFVKTRESADEIQRRMEAD 359
Query: 474 DFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
VSA+HG F G S+VLITT++L
Sbjct: 360 GHKVSALHGAFQGQERDQLLDDFRSGKSKVLITTNVL 396
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 66.1 bits (154), Expect = 8e-10
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
ED + S H+ VG PGRV ++ AL N +KLFVLDEAD+++ F+ I ++
Sbjct: 134 EDDLKKSSKCHIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEESFQSDINEIYNS 193
Query: 196 LSADVQVILLSATMPDDVLEYL 261
L Q+I+ SAT P ++ +L
Sbjct: 194 LPPRKQMIVSSATYPQELDTFL 215
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 66.1 bits (154), Expect = 8e-10
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+R LE G +VV TPGR+ D++ R + + + VLDEAD ML GF+ QI + K +
Sbjct: 347 LRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQ 406
Query: 202 ADVQVILLSATMPDDV 249
Q ++ +AT P +V
Sbjct: 407 PKRQTLMFTATWPKEV 422
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 405 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
++ +IFC+T+R D L ++ R + SA+HGD F G +L+ TD+
Sbjct: 477 SKIIIFCSTKRMCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDV 534
>UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2;
Bacillaceae|Rep: ATP-dependent RNA helicase -
Oceanobacillus iheyensis
Length = 432
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/71 (40%), Positives = 47/71 (66%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD 207
+L++ H++VGTPGR+ D++ AL T K FV+DEAD ML GF +++ + D
Sbjct: 119 KLKTPPHIIVGTPGRILDLVKSGALSIYTAKSFVVDEADLMLDLGFIEEVDQLLVRSKQD 178
Query: 208 VQVILLSATMP 240
+Q+++ SAT+P
Sbjct: 179 IQLLVFSATIP 189
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 66.1 bits (154), Expect = 8e-10
Identities = 32/80 (40%), Positives = 46/80 (57%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ + +L GV V+V TPGR+ D+ A+ + ++ VLDEAD ML GF ++ VF
Sbjct: 114 INPQMMKLRKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVF 173
Query: 190 KMLSADVQVILLSATMPDDV 249
L A Q +L SAT DD+
Sbjct: 174 AALPAQRQTLLFSATFSDDI 193
Score = 41.9 bits (94), Expect = 0.014
Identities = 27/104 (25%), Positives = 45/104 (43%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+R PV I V T IKQ+ + ++ K + L A++F TR VD+
Sbjct: 201 LRGPVNISVSPPNATASKIKQWVVTVDKRN-KPDLFMHLVAENKWEHALVFVKTRNGVDY 259
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L + + V +HGD + + F G ++L+ TD+
Sbjct: 260 LAAMLDEAGYAVDTIHGDKPQPARLRALERFKTGEVQMLVATDV 303
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 66.1 bits (154), Expect = 8e-10
Identities = 37/109 (33%), Positives = 59/109 (54%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+S + RDPV I+V+ +E I+Q+ I +E KLET+ L +A+ FCNT+
Sbjct: 203 ISWVYQRDPVEIVVRPDEENKPDIQQYRIDLEGRGDKLETMVALLTHGGYERAIAFCNTK 262
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
D L+ + +R T A+HGD+ + + +F G RVL+ TD+
Sbjct: 263 NMTDRLSGLLQMRGITAQAIHGDIQQRIREKTLQAFREGKMRVLVATDV 311
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ + I L+ +VV TPGR+ D + R + + ++ VLDEAD ML GF + +
Sbjct: 121 IEKQITTLKKHPQIVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLDMGFIHDVTRIL 180
Query: 190 KMLSADVQVILLSATMPDDVLE 255
+ + + L SAT+ +V++
Sbjct: 181 DQIKSRKNLGLFSATISREVMD 202
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/80 (38%), Positives = 45/80 (56%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ E R ++ G ++V TPGR+ DMI R + + I +LDEADEML+ GF + I +
Sbjct: 112 ITEQARDIKRGAQIIVATPGRMQDMINRRLVDISQINYCILDEADEMLNMGFYEDIVNIL 171
Query: 190 KMLSADVQVILLSATMPDDV 249
+ L SATMP +V
Sbjct: 172 STTPDEKNTWLFSATMPAEV 191
Score = 39.5 bits (88), Expect = 0.075
Identities = 25/109 (22%), Positives = 48/109 (44%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+ + FM DP+ I V + + Y + + + E L L D +V+FC T+
Sbjct: 194 IGKQFMTDPIEITVGAKNSGSATVSHEYYLVNARD-RYEALKRLADANPDIFSVVFCRTK 252
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R + E + ++ +A+HGD+ +F ++L+ TD+
Sbjct: 253 RDTQAVAEKLVEDGYSAAALHGDLSQAQRDGVMKAFRGRQIQMLVATDV 301
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R ++ + G H+VVGTPGR+ + +L + ++ VLDEAD ML GF+D+I +
Sbjct: 114 RPQMKSVAHGAHIVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEIDAIID 173
Query: 193 MLSADVQVILLSATMPDDV 249
+ Q +L SAT P +
Sbjct: 174 QTNKQRQTLLFSATYPKKI 192
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/109 (26%), Positives = 55/109 (50%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ M+DP+RI + + I+Q + + E +L L L D AV+FCNT+
Sbjct: 195 IAKRVMKDPLRIELDSQVHEESTIEQHFYKVTSESQRLLGLQLLLDKFKSESAVVFCNTK 254
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
++ + + + F+ A+HGD++ + + F S VL+ TD+
Sbjct: 255 QEAKDICKDLSKVGFSTLALHGDLEQKDRQENLVRFANKSVAVLVATDV 303
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/78 (39%), Positives = 48/78 (61%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I++ E G ++V TPGR+ D++ +AL + + VLDEAD+ML GF + + +L
Sbjct: 188 IKRAERGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLP 247
Query: 202 ADVQVILLSATMPDDVLE 255
A+ Q +L SATMP + E
Sbjct: 248 AERQTMLFSATMPKQMEE 265
Score = 40.3 bits (90), Expect = 0.043
Identities = 28/109 (25%), Positives = 50/109 (45%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+SR ++ DP R+ V + I Q +E + K + L DL A++F T+
Sbjct: 266 LSRAYLTDPARVEVAPPGKIADKITQSVHFVE-QGAKTQLLIDLLGNHRDELALVFSRTK 324
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
D L + F +A+HG+ + + +F G+ +VL+ TD+
Sbjct: 325 HGADRLARKLSNAGFETAAIHGNRSQGQRERALKAFREGTLKVLVATDV 373
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/107 (31%), Positives = 60/107 (56%)
Frame = +1
Query: 46 HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVILL 225
HVV+GTPGR+ DM+ +AL +T FV+DEAD L GF ++ + L +Q+++
Sbjct: 125 HVVIGTPGRILDMMNEQALKVHTAFAFVVDEADMTLDMGFLAEVDQIAGRLPEKLQMLVF 184
Query: 226 SATMPDDVLEYLDAL*EILYAYLYRRKSLPWKVLNNFTLQLN*KNGS 366
SAT+P+ + +L E + K++ + ++N+ + KN +
Sbjct: 185 SATIPEKLRPFLKKYLENPVIEHIKPKAVISETIDNWLISTKGKNSN 231
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/77 (42%), Positives = 47/77 (61%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I L++GV VVVGTPGR+ D+ + L + +++ VLDEADEML GF + +
Sbjct: 175 IDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTP 234
Query: 202 ADVQVILLSATMPDDVL 252
A Q +L SATMP ++
Sbjct: 235 ASRQTMLFSATMPAPIM 251
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQ--KEELTLEGIKQF-YIAIELEEWKLETLCDLYDTLSIAQAVI 419
+ ++R + PV + + + T+ +QF Y A L+ K+E + + + + +I
Sbjct: 251 MALARSQLHRPVHVRAEGADTQATVPDTQQFVYQAHPLD--KIEIIGRILQANDVEKVII 308
Query: 420 FCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
FC T+R L++ + R F A+HGD+ V+ + + F G + +L+ TD+
Sbjct: 309 FCRTKRACQRLSDDLDDRGFKTRAIHGDLTQVAREKALKKFRHGDATILVATDV 362
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/84 (35%), Positives = 53/84 (63%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+++ I +L+ VH+VV TPGR+ D I ++ +K V+DEAD+M ++GF +Q+ +
Sbjct: 111 IKDQIAELKQRVHIVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNKGFVEQMEKIL 170
Query: 190 KMLSADVQVILLSATMPDDVLEYL 261
L + V L SAT+ D+ ++Y+
Sbjct: 171 LNLPKEKIVSLFSATI-DEEIKYI 193
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/87 (36%), Positives = 45/87 (51%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+R L G H+++GTPGR+ D + L +IK VLDEAD ML GF ++I +
Sbjct: 112 LRAQADSLAKGAHILIGTPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEEIIKIG 171
Query: 190 KMLSADVQVILLSATMPDDVLEYLDAL 270
+ Q +L SAT P + AL
Sbjct: 172 SNMPKQKQTLLFSATFPPKIESLAKAL 198
Score = 41.9 bits (94), Expect = 0.014
Identities = 29/109 (26%), Positives = 54/109 (49%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ ++DP+ I K + E +K + E + K +TL L + +IFCNT+
Sbjct: 194 LAKALLKDPLTI---KVDTVQEAMKINELVYETPD-KFKTLNALIGSYKPDSLLIFCNTK 249
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+V L + + R +V +HGD+D + F S R+++ TD+
Sbjct: 250 AEVISLADRLQQRGHSVIDIHGDLDQRERNEAVILFSNRSKRIMVATDV 298
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/77 (42%), Positives = 42/77 (54%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I L G VVVGTPGR+ D+ L + + VLDEADEML GF I + +
Sbjct: 132 IESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERILRQTP 191
Query: 202 ADVQVILLSATMPDDVL 252
Q +L SATMPD ++
Sbjct: 192 DTRQAMLFSATMPDPII 208
Score = 40.7 bits (91), Expect = 0.033
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEE--LTLEGIKQF-YIAIELEEWKLETLCDLYDTLSIAQAVI 419
I ++R FM P I + + T + QF Y A L+ K+E + + +I
Sbjct: 208 ITLARTFMNQPTHIRAESPQSSATHDTTAQFAYRAHALD--KVEMVSRILQAEGRGATMI 265
Query: 420 FCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
F T+R + + + R F V A+HGD+ + + + SF G VL+ TD+
Sbjct: 266 FTRTKRTAQKVADELAERGFKVGAVHGDLGQGAREKALKSFRTGEVDVLVATDV 319
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/76 (43%), Positives = 43/76 (56%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I LE G +++ TPGR+ D+I + +TI VLDEAD ML GF+ QI V +
Sbjct: 400 ISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIR 459
Query: 202 ADVQVILLSATMPDDV 249
D Q I+ SAT P V
Sbjct: 460 PDRQTIMTSATWPPGV 475
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTL-EGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFCN 428
+++ +M++P+++ V +L +KQ +E + K T+ +S + +IFC
Sbjct: 478 LAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCG 537
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + D L+ + L F +HG+ D + + + G R+L+ TD+
Sbjct: 538 RKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDV 588
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITX---RALHANTIKLFVLDEADEMLSRGFKDQIX 180
+RE I +L+ G ++V TPGR+ D++ R + + VLDEAD M GF+ Q+
Sbjct: 710 IREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVM 769
Query: 181 XVFKMLSADVQVILLSATMP 240
+F + D Q IL SATMP
Sbjct: 770 KIFANMRPDRQTILFSATMP 789
Score = 38.3 bits (85), Expect = 0.17
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWK----LETLCDLYDTLSIAQAVIFCNTRR 437
+++P+ + V + + I+Q + + E K LE L +LYD A+ +IF +
Sbjct: 800 LKNPIEVTVGGRSVVAKEIEQI-VEVRDEPSKFHRVLELLGELYDRDEDARTLIFVERQE 858
Query: 438 KVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
K D L + + ++ + ++HG D + + F G +LI T +
Sbjct: 859 KADDLLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPILIATSV 906
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEML----SRGFKDQI 177
+ +D + L+ H+ +G+PGR+ +I AL ++I+LFVLDEAD++L S F++QI
Sbjct: 135 ISQDKQHLKK-CHIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQI 193
Query: 178 XXVFKMLSADVQVILLSATMPDDVLEYL 261
++ L A+ Q++ LSAT P+ + + L
Sbjct: 194 NWIYSSLPANKQMLALSATYPESLAQQL 221
Score = 35.9 bits (79), Expect = 0.93
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAI-------ELEEWKLETLCDLYDTLSIAQAVIFC 425
+MR+P + + + L G+KQ+Y + ++ E K+++L +L+ + QA++F
Sbjct: 224 YMREPTFVRLNPTDPGLLGLKQYYKIVPSHSLPHKVFEEKVQSLLELFSKIPFNQALVFS 283
Query: 426 NTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
N + L + + + + G + + RVLI+TDL
Sbjct: 284 NLHTRAQHLADILSSKGLPAVCISGGLSQDQRLEAMWKLKQYQCRVLISTDL 335
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +1
Query: 49 VVVGTPGRVYDMITXRALHANTIKLFVLDEADEML-SRGFKDQIXXVFKMLSADVQVILL 225
V+VGTPG V D++ + + IK+FVLDEAD ML +G DQ V + L D Q++L
Sbjct: 211 VIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLVLF 270
Query: 226 SATMPDDVLEY 258
SAT D V +Y
Sbjct: 271 SATFADAVRQY 281
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/97 (30%), Positives = 51/97 (52%)
Frame = +3
Query: 294 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLR 473
+Q E+ ++ IKQ Y+ + E K + L +LY ++I ++IF T++ + L +
Sbjct: 294 LQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLMTIGSSIIFVATKKTANVLYGKLKSE 353
Query: 474 DFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
VS +HGD+ F G S+VLITT++L
Sbjct: 354 GHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVL 390
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/73 (43%), Positives = 45/73 (61%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L++G VV+GTPGR+ D I A+T+++ VLDEADEMLS GF + + + + D
Sbjct: 160 LKNGAQVVIGTPGRILDHIKKDNFDASTLRMLVLDEADEMLSMGFYPDMKDIVEHVPGDR 219
Query: 211 QVILLSATMPDDV 249
+ SATMP V
Sbjct: 220 VSYMYSATMPPKV 232
Score = 39.9 bits (89), Expect = 0.057
Identities = 25/109 (22%), Positives = 54/109 (49%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
V+R F+ DP + + +++++E + Y + + K + L + A+IF NT+
Sbjct: 235 VAREFLDDPGFLSLSTDKVSVEENEYRYYLVNPMD-KDRVMAQLLELEEPESALIFANTK 293
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R+V +L + + + + + M GD+ + + G R+L+ TD+
Sbjct: 294 REVSYLNKFLSNKGYDIDEMSGDLSQRDREEALDRLREGKLRLLVATDV 342
>UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2;
Frankia|Rep: DEAD/DEAH box helicase-like - Frankia sp.
(strain CcI3)
Length = 649
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L +GV +VVGTPGR+ D+ L + VLDEADEML GF + + L +
Sbjct: 204 LRAGVDIVVGTPGRLLDLARQHVLDLAGVGTLVLDEADEMLDLGFLPDVERIMSQLPTER 263
Query: 211 QVILLSATMPDDVL 252
Q +L SATMP V+
Sbjct: 264 QTMLFSATMPGPVI 277
Score = 45.6 bits (103), Expect = 0.001
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQK--EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIF 422
I ++R FM+ PV + ++ E T+ +Q + K+E L + A++F
Sbjct: 277 ISLARRFMKRPVHVRAEQPDEGRTVPTTRQHVFRAHALD-KMEVLARVLQAGGRGLAMVF 335
Query: 423 CNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
TRR D + E + R F +A+HGD+ + + +F G VL+ TD+
Sbjct: 336 VRTRRTADKVAEDLAKRGFAAAAVHGDLGQGQREQALRAFRSGKVDVLVATDV 388
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/83 (38%), Positives = 44/83 (53%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+R L+ GVHV + TPGR+ D++ + + K FVLDEAD ML GF + + L
Sbjct: 113 VRALKRGVHVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLP 172
Query: 202 ADVQVILLSATMPDDVLEYLDAL 270
Q I +ATMP V + L
Sbjct: 173 KQRQTIFFTATMPPKVAQLASGL 195
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
V +D +L G +++ TPGR+ D+I +A + ++++ VLDEAD+ML GF + +
Sbjct: 115 VNKDRNKLHRGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRIS 174
Query: 190 KMLSADVQVILLSATMPDDVLE 255
+++ + Q + SATMP + E
Sbjct: 175 QLVPKERQTLFFSATMPKAIKE 196
Score = 33.9 bits (74), Expect = 3.7
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWK--LETLCDLYDTL--SIAQAVIFCNTR 434
+ +PV++ V E T E I Q+ ++ +E + LE + + + +IF T+
Sbjct: 201 YCNNPVQVSVTPESTTAERIDQYLFMVQQDEKQSLLELILSGRHKVPGEFERILIFTRTK 260
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
D + + + +A+HG+ + + F G + +L+ TD+
Sbjct: 261 HGADRVVKKLSRAGIPANAIHGNKSQPQRQRALDEFRRGKTMILVATDV 309
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
++E R++ G +VV TPGR+ DM+ R + + VLDEADEML+ GF + I +
Sbjct: 111 IQEQAREISRGAQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGFYEDITNIL 170
Query: 190 KMLSADVQVILLSATMPDDV 249
D L SATMP +V
Sbjct: 171 ADTPEDKLTWLFSATMPREV 190
Score = 40.7 bits (91), Expect = 0.033
Identities = 26/109 (23%), Positives = 48/109 (44%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ FM DP+ I V + + + Y + + + + L L D +VIFC T+
Sbjct: 193 IAKEFMHDPLEITVGHKNEGAKNVSHEYYVVHTRD-RYQALKRLSDANPDIFSVIFCRTK 251
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R + E + + A+HGD+ SF ++L+ TD+
Sbjct: 252 RDTQKVAEQLIEDGYNAGALHGDLSQNQRDLVMKSFRNNQIQMLVATDV 300
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I+ L+SG+ +VV TPGR+ D+ AL I V DEAD M GF I + KML
Sbjct: 118 IQALKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLP 177
Query: 202 ADVQVILLSATMPDDVLEYLDAL 270
Q +L SAT P +V+ +++
Sbjct: 178 EKRQNLLFSATYPSEVMSLCNSM 200
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/104 (29%), Positives = 60/104 (57%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
++DP+RI ++++ T I Q I ++ ++ K+E L +++ SI QA++F T+R D
Sbjct: 201 LKDPLRIQIEEQNSTALNIIQRVILVDRDK-KMELLNEVFGVESIDQALVFTRTKRSADK 259
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ +H F+V+A+HGD + F G +++L+ TD+
Sbjct: 260 CSSYLHTLGFSVAALHGDKSQSVRSKTLEKFKNGKTKILVATDI 303
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/78 (39%), Positives = 43/78 (55%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
+ R LE GV +V+ TPGR+ D + VLDEAD ML GF+ QI + +
Sbjct: 272 QQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQ 331
Query: 196 LSADVQVILLSATMPDDV 249
+ D QV++ SAT P +V
Sbjct: 332 IRPDRQVLMWSATWPKEV 349
Score = 33.9 bits (74), Expect = 3.7
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 354 EEWKLETLCDLYDTLSI---AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK 524
E KL L L +S + +IF T+++VD +T ++ + + A+HGD
Sbjct: 385 ENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERD 444
Query: 525 *S*GSFVLGSSRVLITTDL 581
SF G +L+ TD+
Sbjct: 445 FVLSSFRNGRHSILVATDV 463
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRA---LHANTIKLFVLDEADEMLSRGFKDQI 177
E+++ I L+ GV +VV TPGR+ D++T + + I V+DEAD + GF+ QI
Sbjct: 391 EMKKQINDLKRGVEIVVATPGRLIDILTLNSGKLISTKRITFVVMDEADRLFDMGFEPQI 450
Query: 178 XXVFKMLSADVQVILLSATMPDDVLEY 258
+ K + D Q +L SAT P+ + +
Sbjct: 451 TQIMKTVRPDKQCVLFSATFPNKLRSF 477
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I + SGV +V+GTPGR+ D+I L + + VLDEAD ML GF++ + + +
Sbjct: 235 ISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTN 294
Query: 202 ADVQVILLSATMPDDV 249
Q+++ SAT P DV
Sbjct: 295 KVRQMVMFSATWPLDV 310
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+R L+ GV VVV TPGR+ D++ R + + VLDEAD ML GF+ QI + K +
Sbjct: 266 LRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIP 325
Query: 202 ADVQVILLSATMPDDV 249
Q ++ +AT P +V
Sbjct: 326 PRRQTLMYTATWPKEV 341
Score = 37.5 bits (83), Expect = 0.30
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 405 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
++ +IFC T+R D L ++ R F SA+HGD + F G S +L+ TD+
Sbjct: 396 SKVLIFCTTKRMCDQLARTL-TRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDV 453
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMI---TXRALHANTIKLFVLDEADEMLSRGFKDQIX 180
+ I +L+ G ++VGTPGR+ D++ + R + + VLDEAD M GF+ Q+
Sbjct: 430 IESQIAELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMGFEPQVT 489
Query: 181 XVFKMLSADVQVILLSATMP 240
VF + D Q +L SAT P
Sbjct: 490 KVFTRVRPDRQTVLFSATFP 509
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
+ R LE+ H+++ TPGR D + + + +K+ LDEADEML GF++ + + K
Sbjct: 114 KQFRALEAKPHLIIATPGRAIDHLERGKIDLSALKILTLDEADEMLKMGFQEALETILKK 173
Query: 196 LSADVQVILLSATMP 240
+ + Q +L SAT+P
Sbjct: 174 IPEERQTVLFSATLP 188
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/105 (26%), Positives = 52/105 (49%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
+ +D + V + + + I+Q Y ++ E K + L L D A++F NT++ VD
Sbjct: 198 YQKDTKILQVPVKNIAVNAIEQNYFLVK-EVDKAKLLVRLLDLKKDYSAILFANTKKDVD 256
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+T + + F A+HGD+ + +F G ++LI TD+
Sbjct: 257 EITAYLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIATDV 301
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/75 (46%), Positives = 41/75 (54%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
R L+ G VVGTPGRV D I L I+ VLDEADEML GF D + V +
Sbjct: 120 RALKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPE 179
Query: 205 DVQVILLSATMPDDV 249
Q+ L SATMP +
Sbjct: 180 KRQIALFSATMPKQI 194
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R I +++ GV +++ TPGR+ D++ + +I VLDEAD ML GF+ QI +
Sbjct: 438 RTQINKVKGGVEIIIATPGRLNDLVAANVIDITSITYLVLDEADRMLDMGFEPQIRKLLL 497
Query: 193 MLSADVQVILLSATMPDDV 249
+ D Q I+ SAT P V
Sbjct: 498 DIRPDRQTIMTSATWPPGV 516
Score = 37.5 bits (83), Expect = 0.30
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFCNT 431
+++ +M +PV++ V +L I + EE K + + + + + +IFC
Sbjct: 519 LAQSYMSNPVQVYVGTLDLAATHTVTQQIEVIDEEDKYMRVMNFVTNMGPSDKVIIFCGR 578
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + D L+ L +++HGD + + + G RVLI TD+
Sbjct: 579 KTRADDLSSEFVLSGINCTSLHGDREQADREQALEDIKSGDVRVLIATDV 628
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/73 (36%), Positives = 44/73 (60%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L GVH++V TPGR+ D + + ++ + + VLDEAD ML GF+ Q+ + + D
Sbjct: 221 LRRGVHILVATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFEPQVRKICGQIRPDR 280
Query: 211 QVILLSATMPDDV 249
Q ++ SAT P ++
Sbjct: 281 QTVMFSATWPREI 293
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/96 (33%), Positives = 54/96 (56%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD 207
+L+ V V++ TPGR+ D+I ++ +K+ V+DEAD ML GF+ Q+ + + + D
Sbjct: 318 RLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPND 377
Query: 208 VQVILLSATMPDDVLEYLDAL*EILYAYLYRRKSLP 315
Q IL+SAT+P + + L + K+LP
Sbjct: 378 CQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLP 413
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/75 (40%), Positives = 45/75 (60%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSAD 207
QL+ V++GTPGR+ D + +L + I + VLDE D ML G K+Q+ + K L
Sbjct: 115 QLKKNPKVIIGTPGRIIDHLNRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEK 174
Query: 208 VQVILLSATMPDDVL 252
QV++ SATMP ++
Sbjct: 175 RQVLMFSATMPKHII 189
Score = 42.7 bits (96), Expect = 0.008
Identities = 30/111 (27%), Positives = 50/111 (45%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
I VS+ ++ +PVRI V IKQ + + +E K L +IF
Sbjct: 189 IAVSQKYLNNPVRITVGATNKAAAEIKQESMHVSDKE-KFSALTKQLGNRE-GSVIIFVK 246
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
T+R D L + + + T A+HGD+ + SF + R+++ TD+
Sbjct: 247 TKRSADQLAKMLKYENHTAEAIHGDLSQRQRERVILSFRKSNHRIMVATDV 297
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/78 (38%), Positives = 44/78 (56%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+ QL+ +V+GTPGR+ D I + L N + VLDE D M GF QI + K L
Sbjct: 115 LNQLQRRPRIVIGTPGRIIDHIERKTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLP 174
Query: 202 ADVQVILLSATMPDDVLE 255
Q ++ SAT+P D+++
Sbjct: 175 KMRQNLMFSATLPGDIVK 192
Score = 40.3 bits (90), Expect = 0.043
Identities = 26/105 (24%), Positives = 47/105 (44%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
+ P R+ V+ E T IKQ I E + + LY ++F T+++ D
Sbjct: 197 YSNQPERVSVENEATTSVKIKQEIIYASESEKYGKLVTQLYQRKG--SIIVFVRTKQRAD 254
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L + + + A+HGD+ K SF G +++++ TD+
Sbjct: 255 QLAYKLRKDNHSALAIHGDLKQRKRKRVINSFRRGHNQIMVATDV 299
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
++ LE GV ++V PGR+ D+I + ++ VLDEAD+ML GF I + L
Sbjct: 124 VKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLP 183
Query: 202 ADVQVILLSATMPDDVLEYLDAL 270
D +L SATMP + +++L
Sbjct: 184 EDRHTVLFSATMPKSIAALVESL 206
Score = 34.7 bits (76), Expect = 2.1
Identities = 24/104 (23%), Positives = 47/104 (45%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+R+P ++ + T++ I Q + + + K L L T I QAV+F + +
Sbjct: 207 LRNPAKVEIAPPSSTVDRIAQSVMFLNASDKKAALLAQLR-TPGIGQAVVFTLQKNIAND 265
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + T A+HG+ + + +F G +VL+ TD+
Sbjct: 266 VCTFLTESGITAEALHGNRSQGQRERALNAFREGDVQVLVATDI 309
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 64.5 bits (150), Expect = 2e-09
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L+ G+ +++ TPGR+ D++ LH I+ FVLDEAD ML GF I + L
Sbjct: 202 LQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKK 261
Query: 211 QVILLSATMPDDV 249
Q + SATMP ++
Sbjct: 262 QSLFFSATMPPEI 274
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/76 (43%), Positives = 42/76 (55%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
IR L+ G V+VGTPGR+ D + L + +K VLDEADEML GF D + +
Sbjct: 137 IRGLKRGAQVIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLRMGFIDDVEAILAKTP 196
Query: 202 ADVQVILLSATMPDDV 249
Q L SATMP +
Sbjct: 197 DTCQRALFSATMPPQI 212
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/109 (22%), Positives = 53/109 (48%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
V++ ++++ + ++ E T+E I QF + + E KL+ L + + ++IF T+
Sbjct: 215 VAQTYLKNATEVRIESETRTVERIAQFVLPVYAER-KLDALTRILEVEPFDASIIFVRTK 273
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ L E + R V+ + GD++ + + G ++I TD+
Sbjct: 274 AETTMLAEKLSARGHAVAPLSGDLNQRQREQTVEDLKRGKKDIIIATDV 322
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/76 (39%), Positives = 44/76 (57%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I L+SGV +V+GTPGR+ D+I N + VLDEAD ML GF+ ++ + +
Sbjct: 274 ISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTA 333
Query: 202 ADVQVILLSATMPDDV 249
+ Q ++ SAT P V
Sbjct: 334 SVRQTVMFSATWPPAV 349
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLD 135
I L+SGV +V+GTPGR+ D+I N + + D
Sbjct: 211 ISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVIAD 248
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 64.5 bits (150), Expect = 2e-09
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITX---RALHANTIKLFVLDEADEMLSRGFKDQIX 180
+ ++ L+ GV ++VGTPGR+ D++T + + N + VLDEAD +L GF+ QI
Sbjct: 836 IARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIY 895
Query: 181 XVFKMLSADVQVILLSATMPD 243
+ + D Q ++SAT P+
Sbjct: 896 NILRNCRKDKQTAMISATFPN 916
Score = 37.1 bits (82), Expect = 0.40
Identities = 25/102 (24%), Positives = 46/102 (45%)
Frame = +3
Query: 279 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 458
P+ I+V ++ T I QF IE + L L + + +IF N + + D L
Sbjct: 929 PIEIIVGEKGKTNNNIYQFVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQIEADLLYL 988
Query: 459 SMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
++ D+ + +HG D + + F ++VLI T ++
Sbjct: 989 ELYKYDYNLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVM 1030
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 64.5 bits (150), Expect = 2e-09
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Frame = +3
Query: 285 RILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 464
+I V+KEELTL I+QFY+ + KL L DLY +SI Q++IF NTR+ + E+M
Sbjct: 311 KINVKKEELTLNTIQQFYVICNDDADKLSFLSDLYACMSIGQSIIFVNTRKTAFSIAENM 370
Query: 465 HLRDFTVSAMHGDMDNVSVK*S-------*GSFVLGSSRVLITTDLL 584
+S + G N K SF G S+VLI TD+L
Sbjct: 371 RRDGHAISVICGTQTNSGEKMDHEIRDQVMDSFRSGESKVLIATDVL 417
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 40 GVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRG--FKDQIXXVFKMLSADVQ 213
G +++ TPG++ D + R+ +KL V+DEADEM+ Q+ + K ++Q
Sbjct: 227 GSQIIICTPGKMQDFLKKRSFPTEFMKLMVIDEADEMIDHRNMMASQVGQIRKFFRQNLQ 286
Query: 214 VILLSATMPDDV 249
++L SAT ++V
Sbjct: 287 ILLFSATYHEEV 298
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
R L +GV +V+GTPGR+ D++ R H ++++ VLDEAD ML GF QI + +
Sbjct: 229 RILRNGVDIVIGTPGRLNDLL--RKHHLSSVQYLVLDEADRMLDMGFMPQIESLIDQIPK 286
Query: 205 DVQVILLSATMPDDV 249
+ Q ++ SAT P +V
Sbjct: 287 ERQTLMFSATWPKEV 301
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/81 (41%), Positives = 44/81 (54%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ I QL GVHV+V TPGR+ D I + I VLDEADEML+ GF D I +
Sbjct: 111 IGNQIAQLRRGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERIL 170
Query: 190 KMLSADVQVILLSATMPDDVL 252
+ Q +L SAT+ +L
Sbjct: 171 SHVPERRQTMLFSATVSKPIL 191
Score = 49.2 bits (112), Expect = 9e-05
Identities = 31/109 (28%), Positives = 56/109 (51%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++R +MR+P + V+K+ I +FY EE K+E L + + +I +IFCNT+
Sbjct: 193 IARKYMRNPQVMRVEKKHSPK--IDEFYFKTR-EEDKVELLDWILSSNNIRMGLIFCNTK 249
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R+V L ++ ++ +HGD+ + F G +L+ TD+
Sbjct: 250 RRVQRLRRQLNRMGYSADEIHGDLSQSKRERVMERFRRGDFSLLVATDV 298
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/83 (36%), Positives = 52/83 (62%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
++ I +L+ H+VVGTPGR+ D+I +AL + + V+DEAD ML GF + +
Sbjct: 116 QKSIDKLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGS 175
Query: 193 MLSADVQVILLSATMPDDVLEYL 261
+ D+Q+++ SAT+P+ + +L
Sbjct: 176 RMPEDLQMLVFSATIPEKLKPFL 198
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIK---LFVLDEADEMLSRGFKDQIX 180
+ I +L+ GV+V+V TPGR+ D++ T++ VLDEAD M GF+ QI
Sbjct: 501 IENQISELKRGVNVIVATPGRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQ 560
Query: 181 XVFKMLSADVQVILLSATMP 240
+F + D Q +L SAT P
Sbjct: 561 KIFTQIRPDKQTVLFSATFP 580
>UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and RNA
helicases; n=1; Bifidobacterium longum DJO10A|Rep:
COG0513: Superfamily II DNA and RNA helicases -
Bifidobacterium longum DJO10A
Length = 670
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/81 (37%), Positives = 51/81 (62%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
IR L++G +VV PGR+ D++ +AL +++++ V+DEADEM GF + + + +S
Sbjct: 153 IRDLKAGADIVVACPGRLEDLLRQQALTLSSVEVVVIDEADEMADMGFLPPVKRLLEQIS 212
Query: 202 ADVQVILLSATMPDDVLEYLD 264
D Q +L SAT+ V E ++
Sbjct: 213 PDAQHMLFSATLDHGVDEVVN 233
>UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=3;
Bifidobacterium|Rep: Possible ATP-dependent RNA helicase
- Bifidobacterium longum
Length = 728
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/81 (37%), Positives = 51/81 (62%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
IR L++G +VV PGR+ D++ +AL +++++ V+DEADEM GF + + + +S
Sbjct: 169 IRDLKAGADIVVACPGRLEDLLRQQALTLSSVEVVVIDEADEMADMGFLPPVKRLLEQIS 228
Query: 202 ADVQVILLSATMPDDVLEYLD 264
D Q +L SAT+ V E ++
Sbjct: 229 PDAQHMLFSATLDHGVDEVVN 249
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
+V + +R+L+ H+VV TPGR+ D I + + + VLDEAD+ML GF I +
Sbjct: 113 DVAQQLRKLKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 187 FKMLSADVQVILLSATMPDDV 249
Q +L SAT+P D+
Sbjct: 173 LDETPGSKQTMLFSATIPKDI 193
Score = 41.5 bits (93), Expect = 0.019
Identities = 30/109 (27%), Positives = 54/109 (49%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+++ +M +P I VQ EE+T++ I+Q I + K + L + D AVIFC T+
Sbjct: 196 LAKRYMDEPQMIQVQSEEVTVDTIEQRVIETT-DRAKPDALRFVMDRDQPFLAVIFCRTK 254
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ L +++ + + +HGD+ + SF + LI TD+
Sbjct: 255 VRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDV 303
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/78 (41%), Positives = 44/78 (56%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
+ IR+L SGV VVV PGR+ D I + ++ ++DEAD M GF+ I + K
Sbjct: 112 QQIRRLRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKC 171
Query: 196 LSADVQVILLSATMPDDV 249
L Q +L SATMP +V
Sbjct: 172 LVQPHQTLLFSATMPPEV 189
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/76 (40%), Positives = 42/76 (55%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
IR LE G +V+ TPGR+ D + + VLDEAD ML GF+ QI + +
Sbjct: 239 IRDLERGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIR 298
Query: 202 ADVQVILLSATMPDDV 249
D QV++ SAT P +V
Sbjct: 299 PDRQVLMWSATWPKEV 314
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 64.1 bits (149), Expect = 3e-09
Identities = 25/82 (30%), Positives = 48/82 (58%)
Frame = +1
Query: 4 HEVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXX 183
+++ +R +++G +V++ TPGR D+++ A + + V+DEAD M GF+ Q+
Sbjct: 211 NDIENQLRAIKNGSNVIIATPGRFIDLLSSSAFNIKKVSYLVIDEADRMFDLGFEPQVIR 270
Query: 184 VFKMLSADVQVILLSATMPDDV 249
+ + + D Q ++ SAT P V
Sbjct: 271 IAERMRKDRQTLMFSATFPHTV 292
Score = 35.9 bits (79), Expect = 0.93
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLY-DTLSIAQAVIFCNT 431
++R +++ + I+V + I Q I + E+ K +L + D + QA++F NT
Sbjct: 295 IARKLLQNSIEIVVGLRNVVTPNINQS-ILVTNEDNKFNSLLKILGDYTTQGQALVFTNT 353
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + + L ++ ++V +HG MD+ F G VL+ T +
Sbjct: 354 QDRAEDLFGKLNKSGYSVGLLHGSMDSPDRNSILHDFREGRFSVLVLTSV 403
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/76 (40%), Positives = 42/76 (55%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
IR L GV V + TPGR+ DM+ + + VLDEAD ML GF+ QI + +
Sbjct: 251 IRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIR 310
Query: 202 ADVQVILLSATMPDDV 249
D Q ++ SAT P +V
Sbjct: 311 PDRQTLMWSATWPKEV 326
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 63.7 bits (148), Expect = 4e-09
Identities = 26/83 (31%), Positives = 51/83 (61%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+ +L+ + +V+GTPGR+ +++ +A+ + ++ V+DEAD ML GF+ Q+ + + +
Sbjct: 287 LHRLKHNIKIVIGTPGRLLEILKQKAVQLDHVRTVVVDEADTMLKMGFQQQVLDILEQVP 346
Query: 202 ADVQVILLSATMPDDVLEYLDAL 270
D Q +L SAT+P + + L
Sbjct: 347 DDHQTLLTSATIPTGTQQLAERL 369
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+R L+ GV +++ TPGR+ D+ + L + +++FVLDEAD ML GF I + +L
Sbjct: 121 VRALQGGVDILIATPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLP 180
Query: 202 ADVQVILLSATMPDDV 249
+ SATMP ++
Sbjct: 181 QKRHNLFFSATMPHEI 196
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/75 (38%), Positives = 47/75 (62%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+R +++L+ GV ++V TPGR+ D+I + + + +K+ VLDEAD ML GF I V
Sbjct: 136 IRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVI 195
Query: 190 KMLSADVQVILLSAT 234
+ L + Q ++ SAT
Sbjct: 196 EYLPKNRQNMMFSAT 210
Score = 36.7 bits (81), Expect = 0.53
Identities = 23/104 (22%), Positives = 45/104 (43%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+ DPV I + I+ ++ K++ LC L T Q ++F T+ D
Sbjct: 223 LNDPVEIKASVQNQAAPTIEHLVHPCDMAR-KVDLLCHLIKTNKWKQVLVFARTKHGADK 281
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + + + SA+HG+ + + F G ++L+ TD+
Sbjct: 282 VVKILCHQHMRASAIHGNKSQGARTRALEGFKNGDIKILVATDI 325
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/78 (38%), Positives = 44/78 (56%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
++ L G ++V TPGR+ D + +T+K VLDEADEML GF + + +F L
Sbjct: 136 LKALRQGAQILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLKLGFMEDLEVIFAALP 195
Query: 202 ADVQVILLSATMPDDVLE 255
Q +L SAT+P + E
Sbjct: 196 ESRQTVLFSATLPHSIRE 213
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 63.7 bits (148), Expect = 4e-09
Identities = 26/80 (32%), Positives = 52/80 (65%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I +++ +V+GTPGR+ D+ +AL + +K +++DEAD+ML GF ++ + + L
Sbjct: 116 IGRVKVSPQIVIGTPGRILDLFKEQALKPHFVKHYIIDEADQMLDMGFLPEVDRIAQALP 175
Query: 202 ADVQVILLSATMPDDVLEYL 261
+Q+++ SAT+P+ + +L
Sbjct: 176 EKLQMMVFSATIPEKLQPFL 195
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/77 (38%), Positives = 43/77 (55%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ + +R L+ GV VVV TPGR D + + L +++ VLDEADEML GF + + +
Sbjct: 147 ISQQLRVLKRGVDVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEMLDMGFAEDLEAIL 206
Query: 190 KMLSADVQVILLSATMP 240
Q L SAT+P
Sbjct: 207 SSTPEKRQTALFSATLP 223
Score = 37.5 bits (83), Expect = 0.30
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +3
Query: 270 MRDPVRILVQKEELT---LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRK 440
+R+PVR+ + +E++ L ++Q + +K+ TL + D + A++FC TR +
Sbjct: 234 LREPVRVRIAREKVESGELPRVRQTAYIVP-RAFKVATLSRVLDVEAPTAAIVFCRTRTE 292
Query: 441 VDWLTESMH 467
VD LT S++
Sbjct: 293 VDELTLSLN 301
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/77 (41%), Positives = 45/77 (58%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ + R L+ GV +VV TPGR I L ++++ VLDEADEML+ GF + + V
Sbjct: 111 IMDQKRALKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVL 170
Query: 190 KMLSADVQVILLSATMP 240
K D V++ SATMP
Sbjct: 171 KASPDDRTVLMFSATMP 187
Score = 39.5 bits (88), Expect = 0.075
Identities = 26/109 (23%), Positives = 49/109 (44%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ +M + + I + E +T+E I Q E K LC + D +IFC T+
Sbjct: 193 IAESYMHNSITIKAKSETMTMETIDQVVYEAYPEN-KFAALCRIMDLEKDFYGIIFCRTK 251
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+V+ ++ + + +HGD+ S + F + +LI TD+
Sbjct: 252 VEVEKVSAGLANEGYAADYIHGDVAQESRERLLKRFRNRNISLLIATDV 300
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/75 (41%), Positives = 46/75 (61%)
Frame = +1
Query: 40 GVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVI 219
GV ++VGTPGR D+ + + + V+DE DEML+ GF+ Q+ +F M+ Q I
Sbjct: 121 GVDILVGTPGRTMDLALDAVVRFDETQKLVIDEFDEMLNLGFRPQLTSLFAMMKTKRQNI 180
Query: 220 LLSATMPDDVLEYLD 264
L SATM D+V + L+
Sbjct: 181 LFSATMTDEVDDILN 195
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ + R LE GV ++V TPGR+ DMI + IK LDEAD ML GF+ QI +
Sbjct: 236 ISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFEPQIRKIV 295
Query: 190 KMLSADV----QVILLSATMPDDVLEYLDAL 270
+ + Q +L SAT P+++ + LD L
Sbjct: 296 EQMDMPPPGARQTMLFSATFPNEI-QILDHL 325
Score = 33.9 bits (74), Expect = 3.7
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +3
Query: 405 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
A ++F T+R VD L + + + +A+HGD + + + SF G++ +++ TD+
Sbjct: 533 ALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQMERERAMKSFKSGATPIMVATDV 591
>UniRef50_A4S461 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 431
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFK--DQIXXV 186
R I L GV +VVGTPGRV +I + + + VLDE D +L F+ +Q+ +
Sbjct: 148 RTQIEALVDGVDIVVGTPGRVARLIEEGKMFTDDVDAVVLDECDVLLGESFEFAEQVAPI 207
Query: 187 FKMLSADVQVILLSATMPDDVLEYL 261
+ +D Q +L++AT+PD+VL+ L
Sbjct: 208 RNAVKSDTQFVLVTATIPDEVLKQL 232
>UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family;
n=1; Babesia bovis|Rep: DEAD/DEAH box helicase protein
family - Babesia bovis
Length = 681
Score = 63.7 bits (148), Expect = 4e-09
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRA-LHANTIKLFVLDEADEMLSRGFKDQIXXVFKML-- 198
Q+ G+ V+VGTPGRV D A + + I+LFVLDEAD +L GF+ +I ++K L
Sbjct: 179 QIRKGITVLVGTPGRVLDHCDSTASFNVSNIELFVLDEADRLLDMGFETKIRAIYKFLCT 238
Query: 199 ------SADVQVILLSATMPDDVLEYLD 264
+ DVQ ++ SAT+ D V + D
Sbjct: 239 HSEESGTFDVQTVMTSATLTDAVQQLAD 266
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
++L +GV +++ TPGR+ +M+ +A + VLDEAD+M S GF+ QI + +
Sbjct: 306 KELRAGVDIIIATPGRLIEMVKKKATNLQRCTYIVLDEADQMFSLGFEYQIRSIIGQIRP 365
Query: 205 DVQVILLSATM 237
D Q++L +ATM
Sbjct: 366 DKQILLFTATM 376
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
+ R ++ LE H+VVGTPGR+ + + + + I++ VLDEAD+ML GF D+ +
Sbjct: 109 DFRSQVKALEELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKI 168
Query: 187 FKMLSADVQVILLSATMPDDV 249
K L Q +L SAT+ V
Sbjct: 169 LKKLPERRQTLLFSATLSPPV 189
Score = 49.6 bits (113), Expect = 7e-05
Identities = 30/109 (27%), Positives = 56/109 (51%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++R +++DP I ++E +T+ Q+YI + E+ K E L L D A++F TR
Sbjct: 192 LARKYLKDPELIEFEEEGITVPTTVQYYIEMP-EKQKFEALTRLLDQEKPELAIVFVATR 250
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+V L +++ R + +HGD+ + + F G +L+ TD+
Sbjct: 251 IRVGELAKALVERGYHALGLHGDLLQYQRENTLDKFKAGEVSILVATDV 299
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/76 (40%), Positives = 42/76 (55%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
IR L GV +V+ TPGR+ DM+ + + VLDEAD ML GF+ QI + +
Sbjct: 368 IRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIR 427
Query: 202 ADVQVILLSATMPDDV 249
D Q + SAT P +V
Sbjct: 428 PDRQTLYWSATWPREV 443
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/70 (45%), Positives = 39/70 (55%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L G VVVGTPGR+ D + L + + VLDEADEML+ GF D + +
Sbjct: 129 LRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYK 188
Query: 211 QVILLSATMP 240
QV L SATMP
Sbjct: 189 QVALFSATMP 198
Score = 39.9 bits (89), Expect = 0.057
Identities = 22/109 (20%), Positives = 50/109 (45%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
+S ++ DP + + + E I Q YI + K++ L + + ++F T+
Sbjct: 204 LSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR---KMDALTRVLEVEPFEAMIVFVRTK 260
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + + E + R F+ +A+ GD+ + + + G +L+ TD+
Sbjct: 261 QATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDV 309
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/78 (38%), Positives = 45/78 (57%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
E I +L+ GV +++ TPGR+ D+ ++ I VLDEAD+ML GF+ QI +
Sbjct: 357 EQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLD 416
Query: 196 LSADVQVILLSATMPDDV 249
+ D Q ++ SAT P V
Sbjct: 417 VRPDRQTVMTSATWPHSV 434
Score = 42.7 bits (96), Expect = 0.008
Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELT-LEGIKQ-FYIAIELEEWK-LETLCDLYDTLSIAQAVIFC 425
+++ ++++P+ + V +L + +KQ + E E+W ++T L S + ++F
Sbjct: 437 LAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTF--LQSMSSTDKVIVFV 494
Query: 426 NTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + D L+ + L + +V ++HGD + + + +F G R+LI TDL
Sbjct: 495 SRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDL 546
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
+E I+ + GV +++ TPGR+ D+ + ++ +I VLDEAD+ML GF+ QI +
Sbjct: 419 KEQIQHITKGVDIIIATPGRLNDLQMNKCVNLRSITYLVLDEADKMLDLGFEGQITKILL 478
Query: 193 MLSADVQVILLSATMPDDV 249
+ D Q ++ SAT P +
Sbjct: 479 DVRPDRQTVMTSATWPHTI 497
Score = 36.3 bits (80), Expect = 0.70
Identities = 24/110 (21%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFCNT 431
++R ++++P+ + V +L + I + EE K + + L+ +A+IF +
Sbjct: 500 LARSYLKEPMIVYVGTLDLVAVHTVKQDIIVTTEEEKRTLIQEFLRNLAPEDKAIIFVSR 559
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ D L+ + ++ V ++HG+ + + + F G ++LI TDL
Sbjct: 560 KLVADDLSSDLSIQGVPVQSLHGNREQFDREQALDDFRSGRVKILIATDL 609
>UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG8611-PA, isoform A - Tribolium castaneum
Length = 624
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYD-MITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
+L GVHVV+GTPGR+ D ++ A +K VLDEAD +L GFK I + + L
Sbjct: 249 KLRKGVHVVIGTPGRLLDHILHTSAFKTENVKCLVLDEADRLLDMGFKKDIVKIVEALDR 308
Query: 205 DV---QVILLSATMPDDVLEYLDAL 270
Q ILLSAT+ + E D L
Sbjct: 309 TKQKRQTILLSATLNKGIAELADFL 333
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = +1
Query: 46 HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRG-FKDQIXXVFKMLSADVQVIL 222
H+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++QI ++ L A Q++
Sbjct: 183 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 242
Query: 223 LSATMPD 243
+SAT P+
Sbjct: 243 VSATYPE 249
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
R + G +V+ TPGR+ + + + + FVLDEAD ML GF D I ++K L +
Sbjct: 120 RGMAMGADIVIATPGRLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPS 179
Query: 205 DVQVILLSATMPDDV 249
Q ++ SATMP +
Sbjct: 180 SCQTVMFSATMPPKI 194
Score = 40.7 bits (91), Expect = 0.033
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+RDP+ + + ++ YI E + KL L L++ + + +IF + + KV
Sbjct: 202 LRDPIEVEIAISRPPESIMQSAYICHEAQ--KLPILRKLFEQSAPKRTIIFASAKLKVRE 259
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
LT ++ F V+ MH D++ + F G VL+ TD++
Sbjct: 260 LTSTLRKMGFNVADMHSDLEQSQREQVMRDFKNGYVDVLVATDIV 304
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R I+ + SG VVV TPGR+ D + R + + +++ VLDEAD M+ GF I + +
Sbjct: 137 RNQIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAIKRILR 196
Query: 193 MLSADVQVILLSATM 237
L D Q + SATM
Sbjct: 197 ALPRDKQTLCFSATM 211
>UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 07 contig 1, DNA
sequence - Ostreococcus tauri
Length = 506
Score = 63.3 bits (147), Expect = 5e-09
Identities = 34/107 (31%), Positives = 54/107 (50%)
Frame = -3
Query: 578 ISGDQDTRRAQYETAXXXXXXXXXXXXXXSRYSKVTQMHRFSEPIHLATGVAENYSLCNR 399
+SGDQ T RA E A ++ H EP++L T V E+ L N
Sbjct: 117 VSGDQHTGRAGAELAHDDVTGVLIHITVRGGDGEIAGTHVVREPVNLTTSVREDNGLRNG 176
Query: 398 QCIIQVTQSFQLPFF*FNCNVKLFNTFQGKLFLLYKYAYRISHKASR 258
+ +Q+ + QLP F + +V+L NTF+G+ L + A+R+ H+ +R
Sbjct: 177 ERFVQIAERVQLPLFLVDVDVELLNTFKGEFVTLDQNAHRLGHELAR 223
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = -2
Query: 255 LQYIIRHGSRE*YDLNIS*QHLEDXXDLVLETSGQHFISFIKNKKFDGVGMKRTXSYHII 76
L+ + R E +LN+ + ED DL+LETSG+HFI F+K+K D V ++ + H++
Sbjct: 225 LERLRRKRRGENTNLNLRREQGEDVVDLILETSGKHFIGFVKSKDLDVVALQSATTKHVV 284
Query: 75 YTTWSAHHHMNTTLQLANIFTD 10
+T ++T+L+ A IFT+
Sbjct: 285 NSTRGTDDDVDTSLEDAGIFTN 306
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 63.3 bits (147), Expect = 5e-09
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV- 186
+ E IR L G+ +V+ TPGR+ D++ + + ++ +LDEAD ML GF+ Q+ V
Sbjct: 231 ITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLILDEADRMLDMGFEPQMQEVI 290
Query: 187 --FKMLSA-DVQVILLSATMPDDV 249
+ M A D Q +L SAT PD V
Sbjct: 291 NGWDMPPADDRQTMLFSATFPDAV 314
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = +1
Query: 46 HVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRG-FKDQIXXVFKMLSADVQVIL 222
H+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++QI ++ L A Q++
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 223 LSATMPD 243
+SAT P+
Sbjct: 242 VSATYPE 248
Score = 44.0 bits (99), Expect = 0.003
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFY-------IAIELEEWKLETLCDLYDTLSIAQAVIFC 425
+MRDP + + + +L G+KQ+Y +A ++ E K + L +L+ + QA++F
Sbjct: 257 YMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKVFEEKTQHLQELFSRIPFNQALVFS 316
Query: 426 NTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
N + L + + + F + G+M+ + RVLI+TDL
Sbjct: 317 NLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDL 368
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
R+LE G+ ++V TPGR+ D+I + + ++ FVLDE D+ML G + + L
Sbjct: 120 RKLEKGIDILVATPGRLLDLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPR 179
Query: 205 DVQVILLSATMPDDVLEYLDAL 270
+ Q +L SATMP ++ + D +
Sbjct: 180 ERQNMLFSATMPVEIEKLADTI 201
Score = 34.3 bits (75), Expect = 2.8
Identities = 22/104 (21%), Positives = 48/104 (46%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
++ PV+I + E L+ I+Q ++ K L ++F T+ D
Sbjct: 202 LKGPVKIAMTPEFSPLDIIEQEVYFVDKAN-KAALLTYWLKNNEYDSVLVFSRTKHGADK 260
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ + ++ + FT A+HG+ + + + +F +R+L+ TD+
Sbjct: 261 IVKELNKKGFTAVAIHGNKSQANREQALHAFKKRKTRILVATDI 304
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
++ L+ G H++V TPGR+ D++ + N +++FVLDEAD ML GF + + L
Sbjct: 119 VKALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLP 178
Query: 202 ADVQVILLSATMPDDVLEYLDAL 270
Q + SAT+ + E +L
Sbjct: 179 TQRQSLFFSATLAPKITELAHSL 201
Score = 34.7 bits (76), Expect = 2.1
Identities = 23/109 (21%), Positives = 54/109 (49%)
Frame = +3
Query: 255 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 434
++ + PV + V + ++E I+Q + +E +K L + + +A++F T+
Sbjct: 197 LAHSLLSKPVTVNVTPKTTSVEKIQQQLMFVE-RNFKQPLLQKILGGDEVERALVFTKTK 255
Query: 435 RKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
R + L++ + F +A+HG+ + + + +F +VL+ TD+
Sbjct: 256 RTANTLSQRLVRSGFKATAIHGNKSQGARQQALEAFRRKQVQVLVATDV 304
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
R++ESGV ++V TPGR+ D + + + ++ VLDEAD+ML GF I + L
Sbjct: 175 RRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPR 234
Query: 205 DVQVILLSATMPDDV 249
Q ++ SATMP +
Sbjct: 235 QRQAVMFSATMPKPI 249
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/105 (26%), Positives = 51/105 (48%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
F+RDP + V E ++ I Q + + EE K + L L +++ +A++F T+ D
Sbjct: 256 FLRDPREVAVSVESKPVDRIDQQVLLLAPEE-KKDKLAWLLADVAVERAIVFTRTKHGAD 314
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+T + +A+HG+ + + F G RVL+ TD+
Sbjct: 315 KVTRHLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIRVLVATDI 359
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
++L GV ++V TPGR+ DM T RA+ + + + VLDEAD ML GF + I + + L
Sbjct: 118 KRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPE 177
Query: 205 DVQVILLSATMPDDV 249
Q +L SAT+ V
Sbjct: 178 QRQNLLFSATLSKQV 192
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/79 (37%), Positives = 44/79 (55%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
R+ L+ GV +V+ TPGR+ D ++ + VLDEAD ML GF+ QI + +
Sbjct: 201 RQQGDDLKYGVEIVIATPGRLIDFLSSEHTNLRRCSYLVLDEADRMLDMGFEPQIRAIIE 260
Query: 193 MLSADVQVILLSATMPDDV 249
+ D Q ++ SAT PD V
Sbjct: 261 QIRPDHQTLMWSATWPDAV 279
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 408 QAVIFCNTRRKVDWLTESMHLRD-FTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+ +IF T+++VD +T + LRD + +HGD + + SF G + +LI TD+
Sbjct: 336 KTIIFIETKKRVDDITRKV-LRDGWPAMCIHGDKSQREREYTLNSFRSGKNPILIATDV 393
>UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1;
Picrophilus torridus|Rep: ATP-dependent RNA helicase -
Picrophilus torridus
Length = 387
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Frame = +1
Query: 49 VVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVILLS 228
+++GTPGR+ D+I L+ + +F+LDEAD ML GF D I + + L Q +L S
Sbjct: 123 IIIGTPGRIIDLINRDLLNLEHVGMFILDEADMMLDMGFIDDIYKIIENLPEKRQNVLAS 182
Query: 229 ATMP---DDVLEYL 261
ATMP DD+++ L
Sbjct: 183 ATMPERLDDMIKNL 196
>UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2;
Ustilago maydis|Rep: ATP-dependent rRNA helicase SPB4 -
Ustilago maydis (Smut fungus)
Length = 767
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 EDIRQL-ESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
+D RQL +SG ++VGTPGR+ ++++ + + +++++ VLDEAD +L GF + + +
Sbjct: 199 DDYRQLRDSGADILVGTPGRLEELLSKKGVKKSSLEVLVLDEADRLLDLGFTENLRRILS 258
Query: 193 MLSADVQVILLSATMPDDVLE 255
+L + L SATM D + E
Sbjct: 259 LLPKQRRTGLFSATMTDALSE 279
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ + +L GV V+V TPGR+ D+ A+ + +++ VLDEAD ML GF I V
Sbjct: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVL 174
Query: 190 KMLSADVQVILLSATMPDDV 249
L A Q +L SAT DD+
Sbjct: 175 TKLPAKRQNLLFSATFSDDI 194
Score = 33.1 bits (72), Expect = 6.5
Identities = 22/104 (21%), Positives = 46/104 (44%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 449
+ +P+ I V + + + Q ++ + K E L + + Q ++F T+ +
Sbjct: 202 LHNPLEIEVARRNTASDQVTQHVHFVDKKR-KRELLSHMIGKGNWQQVLVFTRTKHGANH 260
Query: 450 LTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L E ++ +A+HG+ + + F G RVL+ TD+
Sbjct: 261 LAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDI 304
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITX---RALHANTIKLFVLDEADEMLSRGFKDQI 177
E+++ I L+ G +VV TPGR D++T + L I V+DEAD + GF+ QI
Sbjct: 370 EMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQI 429
Query: 178 XXVFKMLSADVQVILLSATMPDDVLEY 258
+ K + D Q +L SAT P+ + +
Sbjct: 430 TQIMKTVRPDKQCVLFSATFPNKLRSF 456
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/85 (31%), Positives = 49/85 (57%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
++ + L SG ++V TPGR+ ++ + N +++ DEAD M GF +Q+ +
Sbjct: 121 KLSDQFDNLSSGPDIIVATPGRLTFILEGANISLNRVEMVCFDEADLMFESGFSEQVSDI 180
Query: 187 FKMLSADVQVILLSATMPDDVLEYL 261
+ML Q++L SAT+P ++ E+L
Sbjct: 181 MRMLPPTRQILLFSATLPRNLAEFL 205
Score = 41.1 bits (92), Expect = 0.025
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +3
Query: 270 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFCNTRRKVD 446
++ P I + EE + F+ ++ E + L L D + Q V+FC TR +V+
Sbjct: 209 LKQPEIIRLDTEERLSPDLDNFFYHVKEHEKEGHLLYLLLDLIGDKEQTVVFCATRHEVE 268
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
+L E + + D S M G D + + F + VL+ TD+
Sbjct: 269 YLNEILKIFDIKTSIMFGKADQQEREINLKKFRKQETHVLLVTDV 313
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/83 (32%), Positives = 49/83 (59%)
Frame = +1
Query: 13 REDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
+ I +L+ H+VVGTPGR+ D++ +AL + ++DEAD ML GF + +
Sbjct: 117 QRSIEKLKKQPHIVVGTPGRIKDLVEEQALFVHKANTIIVDEADLMLDMGFIHDVDKIAA 176
Query: 193 MLSADVQVILLSATMPDDVLEYL 261
+ ++Q+++ SAT+P + +L
Sbjct: 177 RMPKNLQMLVFSATIPQKLKPFL 199
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 62.5 bits (145), Expect = 9e-09
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+ +E G+ ++V TPGR+ D+I ++ +++FVLDEAD ML GF + + L
Sbjct: 119 VDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLP 178
Query: 202 ADVQVILLSATMPDDV 249
Q +L SATMP ++
Sbjct: 179 KSRQTLLFSATMPAEI 194
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
V I++L+ G ++V TPGR+ D++ +A+ ++ VLDEAD ML GF D I +
Sbjct: 116 VENQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIM 175
Query: 190 KMLSADVQVILLSATMPDDV 249
+ D Q +L +AT + V
Sbjct: 176 DYAADDRQTLLFTATADESV 195
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/105 (24%), Positives = 49/105 (46%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
++ +P +I V T + I+QF ++ + K + L L Q ++F T+++VD
Sbjct: 202 YLNNPTKIKVTPRNSTAKQIRQFAYQVDYGQ-KADILSYLITEGKWGQTLVFVRTKKRVD 260
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
LT+ + +A+HG+ F+ G VL+ TD+
Sbjct: 261 ELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAGDLHVLVATDV 305
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 62.5 bits (145), Expect = 9e-09
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +1
Query: 40 GVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVI 219
G V+ TPGR+ D+ L++N I + V+DEAD + GF++ + + K L VQ +
Sbjct: 123 GAQVISATPGRLIDIKEQGLLNSNCINMLVIDEADRLFDMGFREAVTSILKDLPKSVQTV 182
Query: 220 LLSATMPDDVLEYLDAL 270
L SAT DD+ + L
Sbjct: 183 LCSATFTDDIKNFSKTL 199
>UniRef50_Q4N4Z2 Cluster: ATP-dependent RNA helicase, putative; n=2;
Theileria|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 648
Score = 62.5 bits (145), Expect = 9e-09
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 43 VHVVVGTPGRVYDMITXRAL-HANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADVQVI 219
+H++ GTPGR+ +++ ++L + IK+ ++DEAD ++ GF+D I + L D+Q +
Sbjct: 143 LHILTGTPGRILALLSSQSLPETHNIKILIMDEADRLIDVGFRDDIISIVDFLPTDIQFL 202
Query: 220 LLSATMPDDVLEYLDAL 270
SAT+ + E D L
Sbjct: 203 FFSATIKSSLKELCDLL 219
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
++++E GV +VV TPGR+ D++ + + + + VLDEAD ML GF+ QI + +
Sbjct: 277 LKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVP 336
Query: 202 ADVQVILLSATMPDDV 249
Q ++ +AT P +V
Sbjct: 337 TKRQTLMYTATWPKEV 352
Score = 36.3 bits (80), Expect = 0.70
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 405 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
++ +IFC+T+R D L ++ R F +A+HGD F G + VL+ TD+
Sbjct: 407 SKIIIFCSTKRMCDQLARNL-TRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDV 464
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 62.5 bits (145), Expect = 9e-09
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+++LE G +VV TPGR+ D++ + + + L VLDEAD ML GF+ QI + +
Sbjct: 551 LKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIP 610
Query: 202 ADVQVILLSATMPDDV 249
Q ++ +AT P +V
Sbjct: 611 PRRQTLMYTATWPKEV 626
Score = 33.9 bits (74), Expect = 3.7
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +3
Query: 405 AQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
++ +IFC+T+R D L S+ R F +HGD F G S VLI TD+
Sbjct: 681 SKVIIFCSTKRLCDHLARSVG-RHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDV 738
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/74 (36%), Positives = 46/74 (62%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
E + L++GV +++ TPGR+ +MI +A + V+DEAD+M S GF+ QI + +
Sbjct: 177 EQWKMLKAGVEILIATPGRLMEMIQKKATNLRRCTYVVIDEADKMFSMGFEKQIRSIMQQ 236
Query: 196 LSADVQVILLSATM 237
+ D Q +L +AT+
Sbjct: 237 IRPDRQTLLFTATL 250
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
I L+ GV V+V TPGR+ D I + +++++ VLDEAD ML GF D I + +
Sbjct: 160 ITALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAP 219
Query: 202 ADVQVILLSAT 234
D Q I+ SAT
Sbjct: 220 IDRQTIMCSAT 230
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +1
Query: 7 EVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXV 186
E I + G+ ++V TPGR++D+I + + +K+ VLDEAD ML GF I V
Sbjct: 112 EQEAQIAAADYGIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLDLGFIKDIQDV 171
Query: 187 FKMLSADVQVILLSATMPDDV 249
K L A Q + SAT+ +++
Sbjct: 172 KKFLPARHQTLFFSATINEEI 192
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
IR+L G+ V++ TPGR+ ++I + +++ +LDEAD+ML GF D++ + + L
Sbjct: 120 IRKLRMGLDVLIATPGRIIELINLGEVRLVELEMLILDEADKMLDLGFADELKELLEALP 179
Query: 202 ADVQVILLSATMPDDV 249
Q +L SAT+P V
Sbjct: 180 KKRQNLLFSATLPQKV 195
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L+ G ++V TPGR+ D+I A H + +K+ VLDEAD ML GF + + + A+
Sbjct: 185 LKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDEADRMLDMGFLPAVRRIVRETPAER 244
Query: 211 QVILLSATMPDDVL 252
Q +L SAT+ ++ +
Sbjct: 245 QTLLFSATLDEEAV 258
Score = 38.3 bits (85), Expect = 0.17
Identities = 23/112 (20%), Positives = 48/112 (42%)
Frame = +3
Query: 249 IGVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCN 428
+G + DP R+ + T + + QF + +E K L + + ++F
Sbjct: 258 VGEITDLVSDPARVEIAPATSTADTVDQFVFPVSIEA-KNNLLPEFLKKEGPERTIVFMR 316
Query: 429 TRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
T+ + D + + +A+HG+ + + +F G+ VL+ TD+L
Sbjct: 317 TKHRADSCCRRLERKGIKAAAIHGNRSQAQRERALSAFRDGTVDVLVATDVL 368
>UniRef50_Q4UDY7 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 628
Score = 62.1 bits (144), Expect = 1e-08
Identities = 25/85 (29%), Positives = 53/85 (62%)
Frame = +1
Query: 16 EDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKM 195
E R + +G + + TP R+ DMI+ + ++ + K FVLDEAD+M ++ ++ ++ + +
Sbjct: 257 EMFRSVHNGCEIAICTPQRLVDMISSKGINLSETKFFVLDEADKMFTKEYESKVISILNL 316
Query: 196 LSADVQVILLSATMPDDVLEYLDAL 270
L D ++L+SA+ D++ + + +L
Sbjct: 317 LRDDTLMVLVSASTTDEIYKKIKSL 341
Score = 36.7 bits (81), Expect = 0.53
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 399 SIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTD 578
S +Q +IFCN+R V+ L ++ + ++GDM + SF GS R LI TD
Sbjct: 390 SQSQVIIFCNSREVVEQLYSFLYSGYKSSCKLYGDMLPTERHSTISSFKKGSYRTLIATD 449
Query: 579 LL 584
L+
Sbjct: 450 LV 451
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Frame = +1
Query: 4 HEVREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXX 183
H + L S +++ TPGR+ +I L N ++ + DE D + GF DQ+
Sbjct: 407 HGLEGQFESLASNPDIIIATPGRLSQLIDETDLSLNKVEFLIFDECDYLFEMGFADQMKT 466
Query: 184 VFKMLSADVQVILLSATMPDDVLEYLDA-L*EILYAYLYRRKSLPWKVLNNFTLQLN 351
+ K +S Q ++ SAT+P+++ + A L E ++ L ++ + NF L N
Sbjct: 467 ILKKVSQQRQTLMFSATIPEELSSFARAGLKEYVFVKLDSEFTINENITLNFILTRN 523
>UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Rep:
DEAD-box helicase 5 - Plasmodium falciparum
Length = 755
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 28 QLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS-A 204
+L G+ ++ GTPGR+ D I + L IK VLDEADEML+ GF I + ++
Sbjct: 303 KLRKGIDILTGTPGRIIDHIEKKNLSLQNIKYVVLDEADEMLNLGFTHDIERILSNINLK 362
Query: 205 DVQVILLSATMP 240
+ QV+L SAT P
Sbjct: 363 EAQVLLYSATTP 374
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITX---RALHANTIKLFVLDEADEMLSRGFKDQIXXVFK 192
+ L+ GV ++VGTPGR+ D++T + + N + VLDEAD +L GF+ QI +
Sbjct: 786 LNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIHNILN 845
Query: 193 MLSADVQVILLSATMPD 243
D Q ++SAT P+
Sbjct: 846 NCRKDKQTAMISATFPN 862
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITX---RALHANTIKLFVLDEADEMLSRGFKDQIX 180
+++ I L+ G H++V TPGR+ D++ R L + + V+DEAD M GF+ Q+
Sbjct: 499 IKDQIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDEADRMFDMGFEPQVL 558
Query: 181 XVFKMLSADVQVILLSATMP 240
+ + + D Q +L SAT P
Sbjct: 559 KLTQSIRPDRQTVLFSATFP 578
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/77 (36%), Positives = 49/77 (63%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+++DI ++ +GVHV+VGTPGR+ D++ R + + V DEAD++L F + + +
Sbjct: 216 MQDDIIRVSNGVHVMVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGETVTKLL 275
Query: 190 KMLSADVQVILLSATMP 240
+L + Q++L SAT P
Sbjct: 276 DLLPREKQMLLYSATFP 292
Score = 52.0 bits (119), Expect = 1e-05
Identities = 37/111 (33%), Positives = 56/111 (50%)
Frame = +3
Query: 252 GVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 431
G R +M++P+ I + KE L G+KQFY ++ E KL L L LSI Q VIFCN+
Sbjct: 297 GFIRRYMKNPLCINLMKE-LAPVGVKQFYTYVKPSE-KLLCLKSLLLRLSINQCVIFCNS 354
Query: 432 RRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDLL 584
+ V+ L + +H M +F+ G ++L+ TDL+
Sbjct: 355 IKTVELLAMKITEMGLPSYFIHSKMAQEDRNIVFHNFLKGKCKILVATDLI 405
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/81 (37%), Positives = 48/81 (59%)
Frame = +1
Query: 25 RQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSA 204
R+ S H+ +G PGRV +I L + ++LFVLDEAD+++ F+ I ++ L
Sbjct: 137 RKKLSNCHIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEESFQKDINYIYAKLPP 196
Query: 205 DVQVILLSATMPDDVLEYLDA 267
+ QVI SAT P D+ +L++
Sbjct: 197 NRQVISSSATYPGDLEIFLES 217
>UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 59; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 -
Strongylocentrotus purpuratus
Length = 620
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +1
Query: 22 IRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS 201
+ +L G+ +VGTPGR+ ++I + + IKL +DE D ML GF+ Q+ + L
Sbjct: 341 LHRLRQGIQFIVGTPGRIMEIIKQEGVCLSEIKLVAIDEVDTMLQLGFQQQVYDIMTHLP 400
Query: 202 ADVQVILLSATMPDDVLEYLDAL 270
+ Q I SAT+P + + +L
Sbjct: 401 DNHQTIFTSATIPSSIEKMASSL 423
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/86 (33%), Positives = 53/86 (61%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+R+D+ +L+ HVV+ TPGR+ D+I + +++ VLDEAD++LS+ F +
Sbjct: 190 LRDDVMRLDDTGHVVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLLSQDFVQIMEAFI 249
Query: 190 KMLSADVQVILLSATMPDDVLEYLDA 267
L + Q++L SAT P V +++++
Sbjct: 250 LTLPKNRQILLYSATFPLSVQKFMNS 275
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/78 (37%), Positives = 43/78 (55%)
Frame = +1
Query: 31 LESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLSADV 210
L+ H+VVGTPGRV D L + +K ++DEAD ML GF D + + L ++
Sbjct: 119 LKQKSHIVVGTPGRVLDHCETGTLKCSNVKYVIIDEADLMLDMGFLDDVKRILSYLPENI 178
Query: 211 QVILLSATMPDDVLEYLD 264
++L SATM + + D
Sbjct: 179 TIMLFSATMGEALYALTD 196
Score = 39.1 bits (87), Expect = 0.099
Identities = 29/105 (27%), Positives = 45/105 (42%)
Frame = +3
Query: 267 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 446
FM PV + ++ T++ I+Q + EE K E + + A+IFC TR V+
Sbjct: 198 FMNSPVEVKLEDGTETVDSIEQLGCFVT-EEDKYELFLRMLYKNNPTNAMIFCGTREMVE 256
Query: 447 WLTESMHLRDFTVSAMHGDMDNVSVK*S*GSFVLGSSRVLITTDL 581
L + +HG +D + F G R LI TD+
Sbjct: 257 VLYYKLKKEKVWCGMLHGLIDQKQRIHTIDDFRTGGFRYLIATDV 301
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +1
Query: 10 VREDIRQLESGVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVF 189
+ I +L+ H++VGTPGR+ ++I R + A+TIK ++DEAD +L D I +
Sbjct: 113 IMRQIDKLKLKPHIIVGTPGRILELIQKRKISAHTIKTIIIDEADRLLDDYNLDNIKAII 172
Query: 190 KMLSADVQVILLSATMPDDVLE 255
K + Q+++ SAT+ +E
Sbjct: 173 KTTLKERQIVMCSATISKKTVE 194
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,240,829
Number of Sequences: 1657284
Number of extensions: 14867281
Number of successful extensions: 37054
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 34732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36712
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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