Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0211
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    57   2e-10
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.77 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.77 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   1.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.2  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 56.8 bits (131), Expect = 2e-10
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
 Frame = +1

Query: 40  GVHVVVGTPGRVYDMITXRALHANTIKLFVLDEADEMLSRGFKDQIXXVFKMLS----AD 207
           G H++V TPGR+ D +    +  N++K FVLDEAD ML  GF   +  +    S     +
Sbjct: 285 GCHILVATPGRLKDFVNRGNVSFNSLKYFVLDEADRMLDMGFLGDVEEMLSHQSMPATGE 344

Query: 208 VQVILLSATMPDDV 249
            Q ++ SAT P++V
Sbjct: 345 RQTLMFSATFPEEV 358



 Score = 27.5 bits (58), Expect = 0.11
 Identities = 16/71 (22%), Positives = 32/71 (45%)
 Frame = +3

Query: 363 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDNVSVK*S*GSF 542
           K   L  + +     + +IF  T+R  D+L   +  ++   +++HGD      + +   F
Sbjct: 396 KRSKLVSILEKAPNERTLIFVETKRNADFLATFLSEQNIQSTSIHGDRYQSEREKALLDF 455

Query: 543 VLGSSRVLITT 575
             G  +VL+ T
Sbjct: 456 KTGHRKVLVAT 466


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 58  PPPHEHHSP 32
           PPPH HH P
Sbjct: 737 PPPHPHHQP 745


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 58  PPPHEHHSP 32
           PPPH HH P
Sbjct: 629 PPPHPHHQP 637


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 668 EYNFSRFGWPDHSL 627
           E+NF   GWP H L
Sbjct: 573 EFNFCGCGWPQHML 586


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 683 GPNPGEYNFSRFGWPDHSL 627
           G    ++NF   GWP H L
Sbjct: 569 GEELAQFNFCGCGWPQHML 587


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 469 CVTLLYLLCME 501
           C+TLLY++C E
Sbjct: 322 CMTLLYIICNE 332


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 469 CVTLLYLLCME 501
           C+TLLY++C E
Sbjct: 322 CMTLLYIICNE 332


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 602  YSKFSCGHSNYDLAIQTVKNYIPQDLD 682
            Y K  C  +N+    + +  Y+P+D+D
Sbjct: 1397 YFKIVCYFTNWAWYRKGLGKYLPEDID 1423



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 608  KFSCGHSNYDLAIQTVKNYIPQDLD 682
            K  C  +N+    Q V  Y+P D+D
Sbjct: 1824 KVVCYFTNWAWYRQGVGKYLPSDID 1848


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 446 IHLATGVAENYSLC 405
           +HLA GV   YS+C
Sbjct: 123 VHLAYGVVIIYSIC 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,153
Number of Sequences: 336
Number of extensions: 4011
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)